| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNB05430 |
|---|
| Symbol | |
|---|
| ID | 3255753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006684 |
|---|
| Strand | - |
|---|
| Start bp | 1529519 |
|---|
| End bp | 1532167 |
|---|
| Gene Length | 2649 bp |
|---|
| Protein Length | 599 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | 638255186 |
|---|
| Product | expressed protein |
|---|
| Protein accession | XP_569288 |
|---|
| Protein GI | 58264264 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.000548098 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATTTACGCAT CTGCTGTTGC CTTGTCGGAC CTTGACCAAT CAACAAAAGT CTTCGTATTC
GGCATACTGC GTTTCTTGCT CACTGTTTAT TAGATCAGTA TGAGCCAAAC TAGTAACAGT
CAAGCCAAGC CCGCCCGACA GCGTAAATCA TCATTGCCAC CCAGCCTGCC TGACGATGTT
ACCGACATTC CCATGTGGGA TCTTTTGGAA CTGGAACCCC CTCCTAGTGA CGAAGAATTG
GAGAGGAACT ACTCTGCTGC TCTGAAAGAG TTATGGCACG AAGAATTCAA TGGGGAGTTT
AGCTACAATT TTCGACTCTT CTTCAATCTC GAGAGATGTG TCAGAACTCG GCCGCTCCAC
CCTCCTAGCC TCACATTTCA TGTTTTTGTT GGATTTGTAC AAGAACGGCC ACTGTCTCGC
GTTCTGTCAG CAACGATGAG GACTCCTTAT TCAAAAACAA AAGTGAAGGC AGCAGTCGAC
AGGTGGATAC CGAAATTGGA AACGGCGGAG GAGCAGGAGG AGGAGGATGG GGATTGGGTG
GCATCCAGCA AGTCGTCTGG AACAGACCGT ACGTTACTTC TATTTTTTTT TTTACAGCGG
GAGTAAGCAG TATCATTAAC GACAACACAG ACGTAAAGTC ATCCAGTAAG GTTACGTCTA
CGTCATCCTC TCAAGGGGGC ATTCGACGCC CGGATTATGT GCTTGAAGTT ACATGCCGGC
ACGTTGGTGG CAGAAAATCC ACATCTATCC CCCTCTCCAT CGAAATTAAA GCTTTCCCTT
TGAATGATTT TGGCCATCCA CAATCCCAAT CAGAGGCCGA TAAAGCTTTC GTGAAGGGTC
TGAGTCAGAC GGCAATGTAT GCGCTGGCGG GATGGGAGAT GTACCGATAT CGTCGCAGTC
TTTTCATTTG TGGACCGGCT TTTTGTAGGG TCTTTGTGCT CGACGACAAC GTTCTTGCTG
TTGAAGTGTC GTCACCTCCA ACCTCTTTGT CGCCCCTCAA TGTGCCTTCC TTCTTTTCCT
CATACAGTTA CGGCTCAATG CCGCATAATC TTATATCCCC TCTCGCCAAT GAAGAGTCGG
TTTCGCCGAC TCTATTCAAA CATAACCCTG ATTACACTAT CAACCCCCTC TCGTGTCGTC
TTTTGGAATC ATTCATCCGA GGCACTTTGG AAAGAACCCT TCGCCAAACC GTTGGCGAGG
CTCTAGGCTG CCAGGCAGAG GAGATGGACA CTGACTACCT GTCAGCTTCC CATTCAGGTA
TAGCTTTTGC AACATTGACT CCTTTGTCGA ATAGACAGAA TTTGGTTGCC CATGCTCGTG
ATAACGCCAC TATCAGCAAA GCCGCCAATT CTGGTGCAGG CCGTAAGAAA AAAGCTAGCT
CTAAGAAGGG TTCCTATTTA AAGACGCGTG GGAATAGAAG AGATCCGGGT GGCGAGAGCG
GTGGTGACAG AGGAGCAAGT GGGGGCGATG GGGATGGTAG GGGTGATACG GGTGGTGGAA
ATGGTGAGCG TGGTGGAGAT GGCGGAGCAC ACTTTTCAGG ATCGGGATTT GCCCGCGATG
AGGGAGGTGA AGACACCGAC GCCAAAAGGA CTCATAACCT GTCAGGCTCT CATGATAAGC
ATCTGCCTAT TGAGGCTCTT GATAGTTCAC CAGAGGCAGA GAGCGTTGTA TGGAAGGAAA
GCGGCTGTTT GGCTAAACCA AACGGACGCA ATCGTGAGTG CTTCTTCGGC TTGGTTGGAC
CATTTATTGA TACCTTGAAT CCAAGGATTT AACGATTGGC TGGAAGCCCT TTCGCAGGCC
GAGAAAGCTA CTGATATTTC CAGCAATGGC GTATCACCTG CCACCGACAC CATCGAAGAT
GTAGCTGACC TTGCCATGGA CTCAAACGAG TACCAACAGT TACGTATAAC TACCCTCCTG
GCCGATTTGG ACGTACGCTT TGTGTCGGTC AGCAGCGCCC AAATGGATGA ACTATTTTCT
GCTGATTCTT CAGTATATTC ATTCGCATCC TACATCACTG GCTAATCCAA TGAAAAGGCT
GCTATAACCT TCCCACGGGA CAAGGGAGTC AATCATAAAG TCAATTGCTC CACATCTTTC
GTCTCATCTT CTTCATCCGG CACGCATTCG CTGATGACAC CTGTATCATC TCGTACCCAA
TTGCGATTGG CCCAACCTTC TGCTGTTGCT CACTCTTCTG CTTCTTTTAA TTTGGGCCAT
TTTAAGGAAA ATGACGACGA AATTTCCCAT GTCTTTTTGG ACCAAACATA TGCCGGCTAA
ATTTCTGTGT GAGTACATAC ATGCATCACT ATAACATTGT ATCTTCGATT GACCTATTGT
ATACTTCCAG AAATCATTCA CATCCATATG GATCGACTCG TGGCCCAATT CCGAACTCCT
ATAACTATAA CCATTTGACC ATCATATGAT GGAGTAACAT TGATTGGAGC ACACAGCCAC
GTTAATGATA CAAGCTTTAA TTAACTTAGC CATCCTATAA GTACGGTGAC CCATACCGAG
AAACATTTTT TAACTATTCA ATTGTACGGG CTTGTAGCCA ATTGCGACCC AATTATAACT
GTGGGCTTTT TATGTCGTGA TACGATTACA GAGACAAACA TTGTACCTAT ATGGTCATGA
AAACGACAG
|
|---|
| Protein sequence | MSQTSNSQAK PARQRKSSLP PSLPDDVTDI PMWDLLELEP PPSDEELERN YSAALKELWH
EEFNGEFSYN FRLFFNLERC VRTRPLHPPS LTFHVFVGFV QERPLSRVLS ATMRTPYSKT
KVKAAVDRWI PKLETAEEQE EEDGDWVASS KSSGTDHVKS SSKVTSTSSS QGGIRRPDYV
LEVTCRHVGG RKSTSIPLSI EIKAFPLNDF GHPQSQSEAD KAFVKGLSQT AMYALAGWEM
YRYRRSLFIC GPAFCRVFVL DDNVLAVEVS SPPTSLSPLN VPSFFSSYSY GSMPHNLISP
LANEESVSPT LFKHNPDYTI NPLSCRLLES FIRGTLERTL RQTVGEALGC QAEEMDTDYL
SASHSGIAFA TLTPLSNRQN LVAHARDNAT ISKAANSGAG RKKKASSKKG SYLKTRGNRR
DPGGESGGDR GASGGDGDGR GDTGGGNGER GGDGGAHFSG SGFARDEGGE DTDAKRTHNL
SGSHDKHLPI EALDSSPEAE SVVWKESGCL AKPNGRNREC FFGLAEKATD ISSNGVSPAT
DTIEDVADLA MDSNEYQQLR ITTLLADLDV RFVSVSSAQM DELFSADSSV YSFASYITG
|
|---|
| |