Gene CNB04580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNB04580 
Symbol 
ID3256014 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006684 
Strand
Start bp1311868 
End bp1312788 
Gene Length921 bp 
Protein Length193 aa 
Translation table 
GC content51% 
IMG OID638255101 
Productstructural molecule, putative 
Protein accessionXP_568950 
Protein GI58263080 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0037592 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTTCT CCTTTCTTTC CAACCCATCA TTCTCTAAAA CTCACCTCTC ATTCCTAAAA 
ATGGCCACCA AATCCGCTGC CTCTGTCGTC GTACGTACAC GAAGATACAG AAACCGCCTC
GAAATCACTA ATTTTACCCT TTGCAGGACT GGTCCAAGAT CTACACCGGT CTCGGTCTCG
ACAAGCAAAC TCTCACTTCC CTTCAGTCTT TCCGCGCTCG ACACTCTACC GCCTTGAACA
AGAACTCTGC CCTTAAGGCT ACCGCCCCTT CCATTGACTT GTCCCATTAC AAGTCTGTCC
TTAAGGACCA GCAGGCGGTT CAGTTGGCGG AGAAGGTCTT GGGCGAGTTT AAGCCTGTCA
ACTACGATGT GAGCAAGTGG AACGGTGTTG TTGAGGCTTT CGAGGGAAAG GCTGTGAGTA
GAAAGTTTTC AAGGGGTGGG TGTCGCGTTA GGAGCTGGAT TGGAGATGGA ATTTCGGATG
CGATGGAGAC GCATTGAACA TGAGCTGGAA GATGAGCAAA CGCCAGCGGA GGAATACGCG
ACACCCCTTC ATCGGCTCGC TCACCAACTA ATGCCCCAAG TATAGGTTGC CGCCGCCAAG
GAGACCGTTT CCAAGATCTC CACCGAGGAG GCTTCCCTCC AGGCTACCCT TTCCAACATC
AAGGATGCCC GACCATTCGA GGATCTTACC GTCGACGAGG TTGCCAAAGC CCGGCCCGAA
ATTGCCAAGG CTGTTGAGAC TATGCTTAAG AAGGGCAAGT GGTCCGTCCC CGGCTACAGG
GTGGGTTCTA TCTCCTATGA TCAGATGTTT TCTGGACACT GCTGATGTGC ATTTTTGCGG
CCAATAGGAG AAGTTCGGCG ACCTTTCTCT TATGTAACTG GGCGATTGAT TGGTGTCGAA
ATGCATATTC TAAAGAAGAT C
 
Protein sequence
MHFSFLSNPS FSKTHLSFLK MATKSAASVV DWSKIYTGLG LDKQTLTSLQ SFRARHSTAL 
NKNSALKATA PSIDLSHYKS VLKDQQAVQL AEKVLGEFKP VNYDVSKWNG VVEAFEGKAV
AAAKETVSKI STEEASLQAT LSNIKDARPF EDLTVDEVAK ARPEIAKAVE TMLKKGKWSV
PGYREKFGDL SLM