Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNB04540 |
Symbol | |
ID | 3256099 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006684 |
Strand | + |
Start bp | 1301901 |
End bp | 1303763 |
Gene Length | 1863 bp |
Protein Length | 252 aa |
Translation table | |
GC content | 48% |
IMG OID | 638255097 |
Product | expressed protein |
Protein accession | XP_568948 |
Protein GI | 58263076 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0233] Ribosome recycling factor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00834951 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CAAGTATCCT TATACGACTA TAATATTCTC TAACCAAATA TGAGACCAGC AGTACTCAGA ACAGTAATCA GATCGCTCCC GAGGGCCACC GCTCCCCTCG CTGCCCGCCC CGTTCTCGTA CGTTTCCTCT CCTCCACTCT CCCTGCTCTC AAGAAGAACA AAGGCCAGAA TACAAAGACT GCCAAACAAA AACTCCGGAT CACAGAGGAT GACCAGGCTG GTGCGACGGA TGATCAAGGT GCGGGTGAAG TTGTGATTGA GGAGGTGGTG AGCAAGGCTA AGGCAAAGAT GGAAAAGTCG GTTCACTGGG CCAAGGCCGT CTTGTTTGAA GGTGTGGAGA GAGGGAGGGG ACGAGTTAGC CCTGGTAGGT AAATATCTTG GACAAGGGAC CAAGAGTAAA GGCTGACTGG GAAAATAGCC CTTTTGGACT CCGTTAGGGT GTCTTTACCC GACACACCCG GAACATTGCA TTTGAATGCC TTGGCATCTG TGACAACTAA AGGCAACGCT TTGTTCGTCG AGGTCTGGGA TACTGCTGTG AGTTTCATGC CTACTTGATT ACCGAAGAAA CGCTAATTAC GGCTACCATA TAGTCTTTGA AACAGGTGGA ATCAGCCATC CACGCTGCCA ACCTTCCTGG AATCTCGCCT CAGAGAATGG CTGGGACAAC CCTCAAAATT CCCATTGCTC GGTAGGCCGT CGCCACAATT TATCCATTAT CTAGCTGACG ATCTGATTTT CTTAGCCCCA CTGTCGAACA GCGTGCTGAA ATTTTGCGTC AGTTAGCTGA GACTGTCGAA GCAGCGAAGA CTCAAATCCG TGTGGCTCGA ACTGACGGTT TCAAGGCCTT GGGCGGAAGA AAAGCGAACG GCACTGATGA AGTGCAGAAG GTTGTGGACG AGATGTGCAA AGACCTTGAC GGACAGTTGG CGTTGGCAAA GAAGGAGTTT GAAAAGCCTT GAGGTGCTAG ACGAGATCGA ACGGGTGTGA TGGAGCGTCA AGGGAGAAGA AGAAAGGATA GATGGAGCTG GATCTCATCT TATAAACCAG AACAGCATCA CACTTGCATT GCATGACAAA CCCATGAGCA TTTGACTTTG ATGTTTGCTG AGTTAATGCT GACCTGACAA CATTCACCAC TGTCGATGAT GGATACACAC GGCCCACACA AGTGGAGCCG AGTCTTTTCT TGATCGGAAA TGGATGATAT CAACTCAATT GTTGGAAGAT TTCCTTGAGG GACTTATTTA CACTCGTGAA ATGAAGACCT TGGAAGGTAT GTATATACGA TGCGTAGGAG TCTTGGACCC ACAAGTCACT TTGAAGTCTC AATTCATCAT TGAACAAGAA CATCATAACA GGACCGATGC CCCGCCACAT TACCATCTAT ACTTCTCGCC CTACCACCCA CGATCACCAA CACCATGTTC CTCACAGTGG AGCCCATTGT GAACCCCATC CTAGTGTTTG AAAACCGCAA GTAGATAGTC AAAAAGGTGG CGGATGATAC CTGAAACTGA TCATCGACAA AGGCAATTAA ACAGTCCTCG AACATCCTGT AAGGGAAGAC GCAACGTTCA ACACGAGCTT AACTCCATGG GTCACAAGTC GACGCAATAG TTCTATCAAC TTGTTCTGAC CACCGCATAG AACTAGCTTG GGGACTAGAA TTTGACGCTT TTTCTATCTT CTTGGTAAAT CACACCACCA ATATCACGCC GTGCCTGCCA TTACTACAAC TTCTGGCAGG ATGACATATC TTAGGCAGTA CAGTTACTGA ACAATTGTTT CAAGATGAAG GATAAAGGCA TGTGGAAGGA GAAAACAAAA ACGGGATGAA ATTGAGACTG GTGTACGACG AGC
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Protein sequence | MRPAVLRTVI RSLPRATAPL AARPVLVRFL SSTLPALKKN KGQNTKTAKQ KLRITEDDQA GATDDQGAGE VVIEEVVSKA KAKMEKSVHW AKAVLFEGVE RGRGRVSPAL LDSVRVSLPD TPGTLHLNAL ASVTTKGNAL FVEVWDTASL KQVESAIHAA NLPGISPQRM AGTTLKIPIA RPTVEQRAEI LRQLAETVEA AKTQIRVART DGFKALGGRK ANGTDEVQKV VDEMCKDLDG QLALAKKEFE KP
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