Gene CNB04540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNB04540 
Symbol 
ID3256099 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006684 
Strand
Start bp1301901 
End bp1303763 
Gene Length1863 bp 
Protein Length252 aa 
Translation table 
GC content48% 
IMG OID638255097 
Productexpressed protein 
Protein accessionXP_568948 
Protein GI58263076 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00834951 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAAGTATCCT TATACGACTA TAATATTCTC TAACCAAATA TGAGACCAGC AGTACTCAGA 
ACAGTAATCA GATCGCTCCC GAGGGCCACC GCTCCCCTCG CTGCCCGCCC CGTTCTCGTA
CGTTTCCTCT CCTCCACTCT CCCTGCTCTC AAGAAGAACA AAGGCCAGAA TACAAAGACT
GCCAAACAAA AACTCCGGAT CACAGAGGAT GACCAGGCTG GTGCGACGGA TGATCAAGGT
GCGGGTGAAG TTGTGATTGA GGAGGTGGTG AGCAAGGCTA AGGCAAAGAT GGAAAAGTCG
GTTCACTGGG CCAAGGCCGT CTTGTTTGAA GGTGTGGAGA GAGGGAGGGG ACGAGTTAGC
CCTGGTAGGT AAATATCTTG GACAAGGGAC CAAGAGTAAA GGCTGACTGG GAAAATAGCC
CTTTTGGACT CCGTTAGGGT GTCTTTACCC GACACACCCG GAACATTGCA TTTGAATGCC
TTGGCATCTG TGACAACTAA AGGCAACGCT TTGTTCGTCG AGGTCTGGGA TACTGCTGTG
AGTTTCATGC CTACTTGATT ACCGAAGAAA CGCTAATTAC GGCTACCATA TAGTCTTTGA
AACAGGTGGA ATCAGCCATC CACGCTGCCA ACCTTCCTGG AATCTCGCCT CAGAGAATGG
CTGGGACAAC CCTCAAAATT CCCATTGCTC GGTAGGCCGT CGCCACAATT TATCCATTAT
CTAGCTGACG ATCTGATTTT CTTAGCCCCA CTGTCGAACA GCGTGCTGAA ATTTTGCGTC
AGTTAGCTGA GACTGTCGAA GCAGCGAAGA CTCAAATCCG TGTGGCTCGA ACTGACGGTT
TCAAGGCCTT GGGCGGAAGA AAAGCGAACG GCACTGATGA AGTGCAGAAG GTTGTGGACG
AGATGTGCAA AGACCTTGAC GGACAGTTGG CGTTGGCAAA GAAGGAGTTT GAAAAGCCTT
GAGGTGCTAG ACGAGATCGA ACGGGTGTGA TGGAGCGTCA AGGGAGAAGA AGAAAGGATA
GATGGAGCTG GATCTCATCT TATAAACCAG AACAGCATCA CACTTGCATT GCATGACAAA
CCCATGAGCA TTTGACTTTG ATGTTTGCTG AGTTAATGCT GACCTGACAA CATTCACCAC
TGTCGATGAT GGATACACAC GGCCCACACA AGTGGAGCCG AGTCTTTTCT TGATCGGAAA
TGGATGATAT CAACTCAATT GTTGGAAGAT TTCCTTGAGG GACTTATTTA CACTCGTGAA
ATGAAGACCT TGGAAGGTAT GTATATACGA TGCGTAGGAG TCTTGGACCC ACAAGTCACT
TTGAAGTCTC AATTCATCAT TGAACAAGAA CATCATAACA GGACCGATGC CCCGCCACAT
TACCATCTAT ACTTCTCGCC CTACCACCCA CGATCACCAA CACCATGTTC CTCACAGTGG
AGCCCATTGT GAACCCCATC CTAGTGTTTG AAAACCGCAA GTAGATAGTC AAAAAGGTGG
CGGATGATAC CTGAAACTGA TCATCGACAA AGGCAATTAA ACAGTCCTCG AACATCCTGT
AAGGGAAGAC GCAACGTTCA ACACGAGCTT AACTCCATGG GTCACAAGTC GACGCAATAG
TTCTATCAAC TTGTTCTGAC CACCGCATAG AACTAGCTTG GGGACTAGAA TTTGACGCTT
TTTCTATCTT CTTGGTAAAT CACACCACCA ATATCACGCC GTGCCTGCCA TTACTACAAC
TTCTGGCAGG ATGACATATC TTAGGCAGTA CAGTTACTGA ACAATTGTTT CAAGATGAAG
GATAAAGGCA TGTGGAAGGA GAAAACAAAA ACGGGATGAA ATTGAGACTG GTGTACGACG
AGC
 
Protein sequence
MRPAVLRTVI RSLPRATAPL AARPVLVRFL SSTLPALKKN KGQNTKTAKQ KLRITEDDQA 
GATDDQGAGE VVIEEVVSKA KAKMEKSVHW AKAVLFEGVE RGRGRVSPAL LDSVRVSLPD
TPGTLHLNAL ASVTTKGNAL FVEVWDTASL KQVESAIHAA NLPGISPQRM AGTTLKIPIA
RPTVEQRAEI LRQLAETVEA AKTQIRVART DGFKALGGRK ANGTDEVQKV VDEMCKDLDG
QLALAKKEFE KP