Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNB04500 |
Symbol | |
ID | 3256102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006684 |
Strand | + |
Start bp | 1294735 |
End bp | 1295445 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | |
GC content | 52% |
IMG OID | 638255093 |
Product | hypothetical protein |
Protein accession | XP_568945 |
Protein GI | 58263070 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.000303386 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTCAG CAGCCCGTCC ATCCGCTGTC TCGAAAAATA CCTCTTCCCC TCAACCGTCA GCCCCGCGAG TCTACACTGC TCGAAAAACG TTCCTCTGGA ACTTGTACAA CCAAGTCTTA ACGAAATCAT CCCTTGTTCT GGTTTTCGAC CATGCAAACA TATCTGCGGC TGAATGGTCC AAACTAAGGC GTGCTGTTGG GTCAATCAAG AGGCCGATTG TCCCTTACAA CCCCAGGCTG CCTAAGGAGG AGCAATTGGA AAGAGCAGAA ATCGAACCAG CGCAGTTGAT GGTCGTACGA TCCGGTGTGC TCGTCGCGAC ATCCAAAGCT TGCTCGTCCC CCATCACTCC TCATATCACA GGCCAGCGGG CTGTTCTTAC CTGCTCCACT CTCTCCCCCA CATATCTCAA CAAAATCCTT ACCGCTCTCT CTAGAACGGT CAAATCTATC AAGCGAGAGA ACTCTGCCAT TCAACCGACT TTGGAACTTG TGGCGGGTTT AGTGGAGGGC GGGAAGGTGA TGGGTCAGAA GGAGTTGGAG GAGTTGGGCA AGGTGCCGGA ACTTGATACG TTGCGAGCGC AGTTGGTTGG TCTTTTGGAG GGACAAGGAA GGAGTCTTGT GGGCGTTTTG AACCAGGCGG CTGGTGGAAG CTTAGTCAGG ACGTTGCAAG GATTGGAGAA CGATCTGAAG GAGAAAGAAG GATCTGCATG A
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Protein sequence | MSSAARPSAV SKNTSSPQPS APRVYTARKT FLWNLYNQVL TKSSLVLVFD HANISAAEWS KLRRAVGSIK RPIVPYNPRL PKEEQLERAE IEPAQLMVVR SGVLVATSKA CSSPITPHIT GQRAVLTCST LSPTYLNKIL TALSRTVKSI KRENSAIQPT LELVAGLVEG GKVMGQKELE ELGKVPELDT LRAQLVGLLE GQGRSLVGVL NQAAGGSLVR TLQGLENDLK EKEGSA
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