Gene CNB03400 details

Gene Information

• Locus tag: CNB03400
• ID: 3256022
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006684
• Strand: -
• Start bp: 1023278
• End bp: 1026866
• Gene Length: 3589 bp
• Protein Length: 873 aa
• GC content: 53%
• IMG OID: 638254985
• Product: hypothetical protein
• Protein accession: XP_568915
• Protein GI: 58263010
• COG category: [B] Chromatin structure and dynamics; [K] Transcription
• COG ID: [COG5076] Transcription factor involved in chromatin remodeling, contains bromodomain

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0021041
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AGAGAATGAA GGCAAGTCCC CCCCCCCCCC ACGCTCCCCC CAGCTCACCC CCTGCAGTAC 
CTCCTCAACT TCCTGGGCGA CGTCCCAGAT GCACCAAACC TCGCAGACCC CGCCTTCCAA 
CAGCTCCTCG TCGACGTGCA GTCGGTCAAG GTATGTCTGC CTCCGCGCGC TGCACCACTG 
ACCGCAACTC TCCACAGGGC GCAGTAAAGA TATCCGCAGA TGCCTTCTAC GAGAGCTTGG 
AGAACATCGT CAACGAACTC AAGACCAGCG TATGTCTTTG CACGGCCGGG GCGGAAGCGT 
CACTGATCCA GCCTCGACCA AACAGCCAGA GTCTATACCA TTTCAAAAAC CGGTATCCAA 
AAGGGAAGCT CCGGACTACT ACGATGGTGC GTGTACCCAT CCGCCAGCAC GCCAGACATA 
CGACCGACTG GCTTTCCTGC TGACGCTCTT CCGTTGCACA TCCAGTCATC AAGCGGCCCA 
TGGACCTCTC CACAATCTTG CGCAACGCCA AAGCCAGGAA ATACAAGAGC AAGGCCGAGT 
TTGCAGCAGA CCTCGACTTG ATATGGAAGA ACTGTTTCGA ATACAACAGT CAAGAGGTGA 
GTCTACAACT CGTATTACAA CTGGGTATGC TAAGCCAAAA AAAAAATGAA TCAAAGTCAC 
ATCCACTTCG GGCGGCTGCT CGATTCATGA AACAAAAAGC AGACCACCAC CTCGAATACC 
TTGCAGATCG CGCAGAGCGT AACAAGCAAC TGCAGTCGTT TTTACCCTCC GCGACGGGGA 
CCGCTTCTCC GTCTCTGAGC GCTATTGGAC ACTCTGCTCT CGGCGGATCC GGGTTGACCA 
TCCTGTTAGG ATCGAGACTG AGAGACGAGG GTCTGGGAGG AGATGAAGAT GCAGCCGGAG 
AAAGCGATGA TGCCTTTGGG GAAGGAGATG CAGAGGGCGA GGTTGACAGA GAAGGAAATG 
ATGTTTTGGA TGTGAGAAGC CAGGATTTTC GTGAAGGGGG TGCGGAGACG AGAGGTGAGA 
GAGGAGAAAC ACCTAGTGAG GAACAACAAA AACAGTCTCC ATTGTGCCAT GCTCATTTTC 
TTCTTTCTTT TTACCAGGCC GAGGTAAGGA CGAAAGAGGT CGAGGGACCA GCGTAGCCTC 
GTCATCTCGA ATGAACGGGC GGCCGAACGG TACCAACCGA CGCAGTGTAC GTCGTCAACT 
TTACAAAGGC TTAATCGGCT GACGGCTGAC TTTTTGCCCT TTTACGGTTA GCCTTCTGCA 
AAGAGGCCAC CACTTACTAC CAACCTCGAC AACGTTCCCG CTCTCCTTCG CACCCCCTAC 
ACCATCCCCT CTCTCTCATC CTTATCCCTC GCGCATGCCG GCCCTTCCTT TTCTGATAAA 
GGCAAAGCCC GAGAATCACT CTCCGGCTAC CCTGCCCCTG CGTGGTATCC CGCGCCTCCT 
GCTACTGCTG CTGCTGCTGC TGCTGCTGCA AGTTTTCAAG AGGCGGGAGA CGATGACGAA 
AGTACGCTGG AGGGATCTTG GTGGGGGAAG ATGATGGATG ATGAAACGCT CGTCGCCGGC 
ATGCCCGCTA TTCCAAAGAT GTCACCGCCT GAACCGGTCA GGCGATGTAG ACCTAAACCA 
CCACCACCGG CAATACCACC AGCGATACCG CCCGCAATCC CACCACCGTT ACCCAACGGC 
TTCGCCAGTG GAGCCCAGAG TCCTCCTCCT GGCTTGTCAT CGTCGTCTAC CGCCACCACC 
ACCGCCACCG CCGCCAAACC GCATGACCAT ACAAAGGACG GTCCGTCGGA CAGGACGGTA 
TCGGTATCCG TCAAGGCCGT CGTTCGCCGC ACGATCAACA ATCTGAATGC AGCACGCCAG 
GCAATGCACC GTATCACCGA GTTTCAACGC ATAGAGGCCG AGGGCGGTAT CCTCCCCCCG 
CGTGGACTGT CGCCTACACC GGCGGAAAAG GAAAAAGAAC ACGAAGAACA AGCTGAACGG 
CGGGATTTCC GACGGATTGA AAACAGGGCC GCGCGCGAAA GAAGGAAGGA GGGCGGGGAG 
GTGGGCCAGG AGGAAGCGGT CAGGATTATG AAAAAGTGTT CGGCCGGAAT GCTGGCACAT 
GCGGGATTCG AGGGCGCGAA CGAGACCGCA CTCGATCTTT TCACCAGGGT CGCAGTCGAT 
CACCTGGATG GCTTGGGCAA GACGTTTAGA TTGCTGTTGG ATGGGTTTTC CCACAAGATG 
ACTCCCGAGG TAAGGCGTCT TGCCATACAT CCGTCGCATG ATTCACAAAA AGCTCAATTC 
ATTGCCAACC CATTTTTAAT GTTTTTTTTT TTTTTAGGAA ATCATTCTAC ACGCCCTCCA 
TGAAAACGGT CAGGTTCAAC CGAGGGATCT GGAAGCTCAT CTTAAAGATG ATATCGAGCG 
AGAAGATGTT AAAATTGCAG AGGTGCAGCG TAAAATGCGT CAGACATTCT ATGAAGTGGT 
AAGTCTTGTT CAAGTATAAC TGCAAGAACG GGCCACACGC GTGTAACTTA CCCCCAAATT 
GCGTAATCAG GCGACTGCCC CCGTTATTCA AGACGATATG ATGTTTGCAG ATGACGGCGA 
AATGCTGCTC GAGTCAGTTT TTGTTCTCTC GCTGGCTCAA ATATTAACTT TTTTTTTTGC 
ATCAGCGGTA ACTTTGCGGA TGAGCTCGGA GAGGATTTCC TCGGTCTGCG AGAACTTGGT 
ATAGATCGTG AATATGGCTT GGCGTCTCTC ACCGTCCCGC AATCCTTGTT CTATGGCAAG 
CGAAAGCGTT TGGCCAACTC GGCAAACGGA GCGTACGTTT TTTTGGTTTT TTTGGCCATA 
GCCGCTCCAA TATTTATTTT TTGACTAATA CTATTTTATT ATTTCGTGTT GTAGTTCCGG 
CAAATCTGAC CTCCCTTATC CTCCTCCACC ATCTTTCATC CCTCTCGCGG CGGCAACACT 
TTCCACCCAC GTACCAGCCC TTCTCCATGC TTTTTACGCT GCCCGAATCG AAGCAGGTCT 
CTCGCTGGAC GAAGACGACG CGTTTGAACC TGCCCATTCT CAGATCGGAA GTCTGGGACA 
GATTTTGATA AAGGGGAAAA TGGGGGATGG TAAAGGCGAT GGGAAAGGAA AAGGTAAGAA 
GCGCGAGAGG GGGGAAGGTG AAGATGAGAA TGGTGAAAGA AAAAAGTCGG GCAAAAAGTA 
AGTTTGTTTA TCACCTCCCC CCCCCCCCCC CCCGGCGGTT AGTGCGCGAT TCGTAAGAGT 
TGCTGAGATT CGTTTTCTTG CCTCGTTAGA CAACCTGGAG TTGGTAAAGG TAACTGGAGT 
ATGTCATTTC CCTCTCAATC GATATGCGTC GCTTTTATTC ACTAAAACTC TCATCTCTGC 
CAGCTCGCCC ATCCAAGGAA GAAAAGGCTC GTCTTGCAGG TGAGAAGAAT GCGGCGAAAG 
GCGAGACGGC TGCTGTCGCG GGAGACGAGG ATGCCGTCGG AGAGGAAGAA GATGCAGAAG 
GTGAAGAAGA GTGATGTAGG GGGCCGGGCT TTCTCGTATG CTCAATTCAT CTACCGGGTG 
TCTATACTCG ATCAATGCCA TTTATGATAT CATAGCATCA TGCATCACC 

 

Protein sequence

MKYLLNFLGD VPDAPNLADP AFQQLLVDVQ SVKGAVKISA DAFYESLENI VNELKTSPES 
IPFQKPVSKR EAPDYYDVIK RPMDLSTILR NAKARKYKSK AEFAADLDLI WKNCFEYNSQ 
ESHPLRAAAR FMKQKADHHL EYLADRAERN KQLQSFLPSA TGTASPSLSA IGHSALGGSG 
LTILLGSRLR DEGLGGDEDA AGESDDAFGE GDAEGEVDRE GNDVLDVRSQ DFREGGAETR 
GERGETPSRG KDERGRGTSV ASSSRMNGRP NGTNRRSPSA KRPPLTTNLD NVPALLRTPY 
TIPSLSSLSL AHAGPSFSDK GKARESLSGY PAPAWYPAPP ATAAAAAAAA SFQEAGDDDE 
STLEGSWWGK MMDDETLVAG MPAIPKMSPP EPVRRCRPKP PPPAIPPAIP PAIPPPLPNG 
FASGAQSPPP GLSSSSTATT TATAAKPHDH TKDGPSDRTV SVSVKAVVRR TINNLNAARQ 
AMHRITEFQR IEAEGGILPP RGLSPTPAEK EKEHEEQAER RDFRRIENRA ARERRKEGGE 
VGQEEAVRIM KKCSAGMLAH AGFEGANETA LDLFTRVAVD HLDGLGKTFR LLLDGFSHKM 
TPEEIILHAL HENGQVQPRD LEAHLKDDIE REDVKIAEVQ RKMRQTFYEV ATAPVIQDDM 
MFADDGEMLL DGNFADELGE DFLGLRELGI DREYGLASLT VPQSLFYGKR KRLANSANGA 
SGKSDLPYPP PPSFIPLAAA TLSTHVPALL HAFYAARIEA GLSLDEDDAF EPAHSQIGSL 
GQILIKGKMG DGKGDGKGKG KKRERGEGED ENGERKKSGK KQPGVGKGNW TRPSKEEKAR 
LAGEKNAAKG ETAAVAGDED AVGEEEDAEG EEE