Gene CNB02980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNB02980 
Symbol 
ID3255889 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006684 
Strand
Start bp905374 
End bp907146 
Gene Length1773 bp 
Protein Length403 aa 
Translation table 
GC content46% 
IMG OID638254941 
Productcalcium:hydrogen antiporter, putative 
Protein accessionXP_568876 
Protein GI58262932 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0387] Ca2+/H+ antiporter 
TIGRFAM ID[TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.696146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTCAC TCGAGACATC TCCACTCCTT CCTTCCCAGG CGTCTGGACA CCCCTCCGTC 
TCGAAGCCTT TCGACTTGTT GGGTTCCACT AGATACCTAT TGTTGGGATC CTGGATTAAC
GTTCTCCTGA TTTGTGTCCC TCTTAGCTTC ACAGGTCAGT GAATAGCCCA CGATCGCTTG
CAATCACAAG TTTTATTGAT TTCCTGATTT GTGAGTAGCC GAGGCGCTTG GTTGGAGTGC
GGCCGCCCGC TTCACGACAT CCTTTCTGGC GATTGTTCCG TTGGCCAAGG TGCGTCGAGC
AAATGTCTAC TCTCCAGCCC CTGTCTGAGA ACTAACCACT CGCTTGTATT AGCTTCTAGG
GGAGTGTACA GAGCAGCTGT CCATGAAACT CGGGCAAACA TTGGGGGGTC TTCTGAACGC
GACGTAAGTC AATCTCCAAA TCCAACATCT CTCAAAACTA ATATAATGTG TTCTTTGAAG
CTTCGGTAAT GCAGTCGAAT TAATTGTTGC CATCGCCGCT TTACGACAGG GCAAGTCTAG
TCAATAATGA AGTGTATATC AATGCTGATT AGTCCCACCT ATATCTAGAT GAGCTAGATC
TTGTTCAAAG GTCCCTTTTA GGCAGTGTGC TTTCAAATTT ACTTTTGGTT TTGGGCATGA
GCTTCTTTGC GTAAGTTTCA CAAGCTATTC ATCTCCGCGG CGATGTAGCT GATAAGTTCC
AGGGCTGGCT TCTTCTTCTA CGAATCCACT TTTCAGGCCA CAGCTGCTCA AGCAAGTTCA
TCATTGATGA CGCTTGCTTG TATAACATTG ATCCTACCAG CCGCCTGTAG GTTCATTGCA
ATTTACAATG TGTATATATG GATTGAACTG ATCACCCAGT AGATCACGCC TCAGAGGTTG
ACAAAAGTAG CTCTCTTGTT GGCACCTTGT TGGGTAAAGA AGTCTCCGAT TCTTCTGATA
GATCCCTCAA AGGTCTCCTC GTCCTTTCGC GAGGTACTTC TGTCATTCTC CTCCTTACTT
ATTTTGGATA TCTTTACTTT CAGCTGCGGA CTCATTCAGG CCTATTCGAA GCTGAGAATG
AAGAAGCAGA AGAAATGGAG GTTGCGGAAA TGGATCAATG GAGTGCCGGC ACTTGGCTCT
TAATCATAAC AGTTATCACT GCATTCTGTG CAGATATTCT TGTTGGCAGC ATTGACGAGA
CAGCTCAGCA ATGGAATATC CCCAAAAGGT AGGCGTTTGG GGTCAAAGAC GCTGTTGCTG
ATGCTATTAG ATTCATTGGG CTCATCCTTC TTCCTCTTGT GGGCAATGCT GCTGAGCATG
TCACATCTGT CTGGATGGCT TGCAAAGGCA AGATGGAGCT TACCATTGGT GTAAGTGTTG
GGTCTAGCAT TCAAATTGCT GCTGGCATGA TTCCACTGCT GGTCATCATT GCATGGCCCC
TTCAAAAGGA TCTAACACTT TTCTTTGTGA GTCACAGTCT GAGAAACCCA TTGAACCTCA
AGCTGATTTC CACCAGGCCA ACTTCGAGAC GATTGTCCTG TTTGTGTCAG TGATGCTGGT
CAACTTACTA CTGCAAGATG GTGGGTCTAA TTTATTACAT TAATCTGGCA AGTGAATGCT
TAATGCATAA TTTGTGGCTG CAGGTCGCAG CAATTACATG GAGGGTGTTA TGTGTAAGTC
CTGTTTTGTT CTGTTCCACT GGGAATTGCA AGGGCTTACT ACTTTGTAGT GATGTCCTTG
TACCTAGTGA TTGCCTTGAG CTACCTTGTC TAA
 
Protein sequence
MASLETSPLL PSQASGHPSV SKPFDLLGST RYLLLGSWIN VLLICVPLSF TAEALGWSAA 
ARFTTSFLAI VPLAKLLGEC TEQLSMKLGQ TLGGLLNATF GNAVELIVAI AALRQGKSNL
VQRSLLGSVL SNLLLVLGMS FFAAGFFFYE STFQATAAQA SSSLMTLACI TLILPAAYHA
SEVDKSSSLV GTLLGKEVSD SSDRSLKGLL VLSRGTSVIL LLTYFGYLYF QLRTHSGLFE
AENEEAEEME VAEMDQWSAG TWLLIITVIT AFCADILVGS IDETAQQWNI PKRFIGLILL
PLVGNAAEHV TSVWMACKGK MELTIGVSVG SSIQIAAGMI PLLVIIAWPL QKDLTLFFAN
FETIVLFVSV MLVNLLLQDG RSNYMEGVML MSLYLVIALS YLV