Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNB02220 |
Symbol | |
ID | 3255546 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006684 |
Strand | + |
Start bp | 642384 |
End bp | 644829 |
Gene Length | 2446 bp |
Protein Length | 695 aa |
Translation table | |
GC content | 50% |
IMG OID | 638254873 |
Product | nucleolus protein, putative |
Protein accession | XP_569151 |
Protein GI | 58263482 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00446] NOL1/NOP2/sun family putative RNA methylase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0735574 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TCTTCATAGC AACATCTCTT CGACAATCTA ATCACAGCAA GCATGGGTCG ACGAGCCAAG AACAAGCAAG GACCTCCCGC TCCTCTCCCG GGATCTATTC CAGAGAGGAC CGAAAGCAGA CGTCAAAAGA CAAAGAAGCG GGCTCCTTCG GCTGTTACCA ATGAAGTTGC AAGTCGCGGC AAGGCGCTCA AAGGCCCTGG AGCCTCGGTC GCTGGAGGCA GAAAGAAGGG TGTCATTGTG GGGAGGACCG GGAAGATGAT CAAAGGGCCT AAGCGTAAAA AAGTTGACGA GGTGGATGAA GACAGCGACT TGGACGAAGC TTTGCAACCC GGGTAGGTAA TCGAGATCAG ACCCAGAGCG ATCGAAGACT GATCATTGGT GCAGAGAATA TTCTAGTGAC GAGGAGGAGG TTGAGCAGCC AAAGACTAAA AAGTCAAAGA AGTCCACGGA GGATGAGTGA GTACTCCTTG CTCCTCTCAC GCGCTGTGCT AATCCAGCTT GGCAGGTCAG AAGGCGAGGA AGAACTCGCT AGAGGCCCCG TGAAGGAACT TGTCTTTTCT GATTCCGAAG AGGACGAAGA AGAAGATGAC AACTTGAACG ACGATGACGA GGCTCTTCCC AAGGGCCAAC ACAATTTCGA TCTTGATGAT GCCCCTCCTT CCGACGATGA CGAAGAGGAC TTGGAAATGG GTGATGAATT TGACATGGAC GAGGATGAGT TCGGATCTGA AGAGGAAGAC GAGGAAGATT CTGCATTTGC TTCTTCAGGT GATGAGGATG CCGACATGGC AGAAGATGAG GATGTACAAG TTGGCGCGGA CGAAGAAGAC GGAATTCAAA CAAATCTTGA GGATGACCTT GAAGAGACGT ACACTTTACC GGCCGTGGAT AATGGTGGAG AAGAGGAAGA ACATGAGCAT GGTACCAGCT TGAGAGAAGT GGAGAACAGG ATGAGATGGT TGGTAGGTGT TGTTTTGAAC AAGGAAGAGA AGGTCTCAAA GGGCGTTCCC GGCAAGTACG TTGATGTCTT TCTTACTGAT TCCGCCCTCA ACTTTCACTG ACACCAAATC CAGATCCAGA TCAGACCACA TGCTTCAACT CCAGCACGAT ATTGCGACTT ACTTCGGCTA CAACACTTTC CTTGTTGGCA AGCTTATGAA GCTTTTCGCT GCTGACGAAG CCCTCGCTTT CTTTGAATCC AACGAATCTC CTCGACCTGT CACTATCCGA GCTAACACCC TTCGTACCCG TAGACGCGAC CTTGCCCAGG CCCTCATCAA CCGAGGCGTC ACTCTAGAAC CCATTGGTAA ATGGTCCAAG GTCGGACTGC AGGTTTTCGA ATCCCCTGTT CCTATCGGTG CCACACCAGA ATACTTGGCT GGTCACTACA TGCTTCAGGC CGCTTCTTCT TTCCTCCCCG TCATCGCACT TGCCCCTCAA CCCAATGAAC GTGTCCTCGA CATGGCTTCC GCTCCCGGCG GTAAGACCAC CTACATCTCC GCCCTCCTTC AAAACACAGG TATCGTTTTT GCCAATGACT CTAACAAGGC TCGAACAAAG AGTCTTACGG CAAATGTACA CAGAATGGGA TGTAAGAACG TTGTAGTTTG CAATTATGAC GCGAGAGAGT TCCCCAAGGT GATGGGAGGG TTCGATAGGG TGTTGCTGGA CGCGCCATGT AGTGGAACAG GTGTCATCAG TAAAGATGCT AGTGTCAAGG TTAACAAGGT AAGCAGCATT TTACATCTGT CAGTGGCTTT TGACTGACAG ACGGTTTATT AGACCGAAAG GGACTTCCAA CTTCTCGCTC ACCTTCAAAA GCAACTGATT CTTTGTGCCA TTGACTCTGT CAACCCGAAT TCTTCCACAG GCGGTTATGT CGTCTATTCT ACTTGTTCTG TTACTGTGGA CGAGAATGAG AGTGTCGTAG ATTACGCATT GAGAAAGAGA CCCAATGTCA AACTCGTCGA AACGGGCTTG GACTTTGGTG TCCACGGGTT CAAAAGCTTC GAGGGCAAGA ACTTCCACTC TAGTGTTTCT CTTACCAGAC GTGTATGTGC TACCTCATTA CTACTGAATC AGAATTCAAA GCTGACACGA CCCAGTTCTA CCCCCATAAA CATAATATGG ACGGTTTCTT TGTGGCCAAG TTCAAGGTCG AACCTCGCAA GAAACTCACC AAGGCTCCTG TTGCCGAAGA GGATGACAGC CCGCAAATGA TTATCAACGA GGAAGGAGAG ATCGTACCAG AGGAAACAGC CAAATTCGAT GCGGCAGAGG ATGAGGAATT GATTAGGGAA AGCAAGAGGA AGGCTCTAAA GAAAAAGGGC ATCAAGGTCT CGGTGAAGGG AGCGGAGAAT GGAAGAAAGG GGAAAGGAAA GGCAGGGAAG GCCTAACGCT GTTCTACTTC TAGATGACTT GTACTTGTGC CATTCGTTCT CGGGCT
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Protein sequence | MGRRAKNKQG PPAPLPGSIP ERTESRRQKT KKRAPSAVTN EVASRGKALK GPGASVAGGR KKGVIVGRTG KMIKGPKRKK VDEVDEDSDL DEALQPGEYS SDEEEVEQPK TKKSKKSTED ESEGEEELAR GPVKELVFSD SEEDEEEDDN LNDDDEALPK GQHNFDLDDA PPSDDDEEDL EMGDEFDMDE DEFGSEEEDE EDSAFASSGD EDADMAEDED VQVGADEEDG IQTNLEDDLE ETYTLPAVDN GGEEEEHEHG TSLREVENRM RWLVGVVLNK EEKVSKGVPG KSRSDHMLQL QHDIATYFGY NTFLVGKLMK LFAADEALAF FESNESPRPV TIRANTLRTR RRDLAQALIN RGVTLEPIGK WSKVGLQVFE SPVPIGATPE YLAGHYMLQA ASSFLPVIAL APQPNERVLD MASAPGGKTT YISALLQNTG IVFANDSNKA RTKSLTANVH RMGCKNVVVC NYDAREFPKV MGGFDRVLLD APCSGTGVIS KDASVKVNKT ERDFQLLAHL QKQLILCAID SVNPNSSTGG YVVYSTCSVT VDENESVVDY ALRKRPNVKL VETGLDFGVH GFKSFEGKNF HSSVSLTRRF YPHKHNMDGF FVAKFKVEPR KKLTKAPVAE EDDSPQMIIN EEGEIVPEET AKFDAAEDEE LIRESKRKAL KKKGIKVSVK GAENGRKGKG KAGKA
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