Gene CNB02220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNB02220 
Symbol 
ID3255546 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006684 
Strand
Start bp642384 
End bp644829 
Gene Length2446 bp 
Protein Length695 aa 
Translation table 
GC content50% 
IMG OID638254873 
Productnucleolus protein, putative 
Protein accessionXP_569151 
Protein GI58263482 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00446] NOL1/NOP2/sun family putative RNA methylase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0735574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCTTCATAGC AACATCTCTT CGACAATCTA ATCACAGCAA GCATGGGTCG ACGAGCCAAG 
AACAAGCAAG GACCTCCCGC TCCTCTCCCG GGATCTATTC CAGAGAGGAC CGAAAGCAGA
CGTCAAAAGA CAAAGAAGCG GGCTCCTTCG GCTGTTACCA ATGAAGTTGC AAGTCGCGGC
AAGGCGCTCA AAGGCCCTGG AGCCTCGGTC GCTGGAGGCA GAAAGAAGGG TGTCATTGTG
GGGAGGACCG GGAAGATGAT CAAAGGGCCT AAGCGTAAAA AAGTTGACGA GGTGGATGAA
GACAGCGACT TGGACGAAGC TTTGCAACCC GGGTAGGTAA TCGAGATCAG ACCCAGAGCG
ATCGAAGACT GATCATTGGT GCAGAGAATA TTCTAGTGAC GAGGAGGAGG TTGAGCAGCC
AAAGACTAAA AAGTCAAAGA AGTCCACGGA GGATGAGTGA GTACTCCTTG CTCCTCTCAC
GCGCTGTGCT AATCCAGCTT GGCAGGTCAG AAGGCGAGGA AGAACTCGCT AGAGGCCCCG
TGAAGGAACT TGTCTTTTCT GATTCCGAAG AGGACGAAGA AGAAGATGAC AACTTGAACG
ACGATGACGA GGCTCTTCCC AAGGGCCAAC ACAATTTCGA TCTTGATGAT GCCCCTCCTT
CCGACGATGA CGAAGAGGAC TTGGAAATGG GTGATGAATT TGACATGGAC GAGGATGAGT
TCGGATCTGA AGAGGAAGAC GAGGAAGATT CTGCATTTGC TTCTTCAGGT GATGAGGATG
CCGACATGGC AGAAGATGAG GATGTACAAG TTGGCGCGGA CGAAGAAGAC GGAATTCAAA
CAAATCTTGA GGATGACCTT GAAGAGACGT ACACTTTACC GGCCGTGGAT AATGGTGGAG
AAGAGGAAGA ACATGAGCAT GGTACCAGCT TGAGAGAAGT GGAGAACAGG ATGAGATGGT
TGGTAGGTGT TGTTTTGAAC AAGGAAGAGA AGGTCTCAAA GGGCGTTCCC GGCAAGTACG
TTGATGTCTT TCTTACTGAT TCCGCCCTCA ACTTTCACTG ACACCAAATC CAGATCCAGA
TCAGACCACA TGCTTCAACT CCAGCACGAT ATTGCGACTT ACTTCGGCTA CAACACTTTC
CTTGTTGGCA AGCTTATGAA GCTTTTCGCT GCTGACGAAG CCCTCGCTTT CTTTGAATCC
AACGAATCTC CTCGACCTGT CACTATCCGA GCTAACACCC TTCGTACCCG TAGACGCGAC
CTTGCCCAGG CCCTCATCAA CCGAGGCGTC ACTCTAGAAC CCATTGGTAA ATGGTCCAAG
GTCGGACTGC AGGTTTTCGA ATCCCCTGTT CCTATCGGTG CCACACCAGA ATACTTGGCT
GGTCACTACA TGCTTCAGGC CGCTTCTTCT TTCCTCCCCG TCATCGCACT TGCCCCTCAA
CCCAATGAAC GTGTCCTCGA CATGGCTTCC GCTCCCGGCG GTAAGACCAC CTACATCTCC
GCCCTCCTTC AAAACACAGG TATCGTTTTT GCCAATGACT CTAACAAGGC TCGAACAAAG
AGTCTTACGG CAAATGTACA CAGAATGGGA TGTAAGAACG TTGTAGTTTG CAATTATGAC
GCGAGAGAGT TCCCCAAGGT GATGGGAGGG TTCGATAGGG TGTTGCTGGA CGCGCCATGT
AGTGGAACAG GTGTCATCAG TAAAGATGCT AGTGTCAAGG TTAACAAGGT AAGCAGCATT
TTACATCTGT CAGTGGCTTT TGACTGACAG ACGGTTTATT AGACCGAAAG GGACTTCCAA
CTTCTCGCTC ACCTTCAAAA GCAACTGATT CTTTGTGCCA TTGACTCTGT CAACCCGAAT
TCTTCCACAG GCGGTTATGT CGTCTATTCT ACTTGTTCTG TTACTGTGGA CGAGAATGAG
AGTGTCGTAG ATTACGCATT GAGAAAGAGA CCCAATGTCA AACTCGTCGA AACGGGCTTG
GACTTTGGTG TCCACGGGTT CAAAAGCTTC GAGGGCAAGA ACTTCCACTC TAGTGTTTCT
CTTACCAGAC GTGTATGTGC TACCTCATTA CTACTGAATC AGAATTCAAA GCTGACACGA
CCCAGTTCTA CCCCCATAAA CATAATATGG ACGGTTTCTT TGTGGCCAAG TTCAAGGTCG
AACCTCGCAA GAAACTCACC AAGGCTCCTG TTGCCGAAGA GGATGACAGC CCGCAAATGA
TTATCAACGA GGAAGGAGAG ATCGTACCAG AGGAAACAGC CAAATTCGAT GCGGCAGAGG
ATGAGGAATT GATTAGGGAA AGCAAGAGGA AGGCTCTAAA GAAAAAGGGC ATCAAGGTCT
CGGTGAAGGG AGCGGAGAAT GGAAGAAAGG GGAAAGGAAA GGCAGGGAAG GCCTAACGCT
GTTCTACTTC TAGATGACTT GTACTTGTGC CATTCGTTCT CGGGCT
 
Protein sequence
MGRRAKNKQG PPAPLPGSIP ERTESRRQKT KKRAPSAVTN EVASRGKALK GPGASVAGGR 
KKGVIVGRTG KMIKGPKRKK VDEVDEDSDL DEALQPGEYS SDEEEVEQPK TKKSKKSTED
ESEGEEELAR GPVKELVFSD SEEDEEEDDN LNDDDEALPK GQHNFDLDDA PPSDDDEEDL
EMGDEFDMDE DEFGSEEEDE EDSAFASSGD EDADMAEDED VQVGADEEDG IQTNLEDDLE
ETYTLPAVDN GGEEEEHEHG TSLREVENRM RWLVGVVLNK EEKVSKGVPG KSRSDHMLQL
QHDIATYFGY NTFLVGKLMK LFAADEALAF FESNESPRPV TIRANTLRTR RRDLAQALIN
RGVTLEPIGK WSKVGLQVFE SPVPIGATPE YLAGHYMLQA ASSFLPVIAL APQPNERVLD
MASAPGGKTT YISALLQNTG IVFANDSNKA RTKSLTANVH RMGCKNVVVC NYDAREFPKV
MGGFDRVLLD APCSGTGVIS KDASVKVNKT ERDFQLLAHL QKQLILCAID SVNPNSSTGG
YVVYSTCSVT VDENESVVDY ALRKRPNVKL VETGLDFGVH GFKSFEGKNF HSSVSLTRRF
YPHKHNMDGF FVAKFKVEPR KKLTKAPVAE EDDSPQMIIN EEGEIVPEET AKFDAAEDEE
LIRESKRKAL KKKGIKVSVK GAENGRKGKG KAGKA