Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNB01970 |
Symbol | |
ID | 3255760 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006684 |
Strand | + |
Start bp | 573200 |
End bp | 576729 |
Gene Length | 3530 bp |
Protein Length | 1072 aa |
Translation table | |
GC content | 50% |
IMG OID | 638254846 |
Product | pre-mRNA splicing factor, putative |
Protein accession | XP_569125 |
Protein GI | 58263430 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTAGAT CACCGTATAG ATCATCGAAC AGGAGCTATC GCAGCCCCTC GCCTTCCCGG TACGACCGAT CTCACCCGAG CTCCTCTTCT AGACGTCAAG ACGACCGAAA AGCCTCGAGG TACGACGACG ATTATTCGAG GGACCGAGAG AGAGATAGGG AAAGGGAAAG GGATAGGACT AGAGACTACA GGGATAGAGA TAGGGATTAT GATAGGAGGC GAGATAAGGA CAGATATCGT GATGATGACC GAGACAGACG GAGGAGAGAC GATAAAGATG ACAGGCGGCG AGAAGAGAGG GATCGAGGTT CTGACCGCAA GAGAGATTCT GAGAGGAGAT CTCCTATGTC GACCATTCGT GTGGATCCTA TTGTATCATT AGCTTCACCT GTTCCGGAAA CTGAAGAGGA GAAGAAACGA AAGGCAAAAG AGAGACTGGA AACTTGGAAG CGCCAGCGTG CCTTGAAGGA GGGCAAGTCT GCAGCTGCAA CACCTGAGCC GAAGAGCACT GCACCTCCCC CCGTTACCTG TGAGTGCAAT TTGGCCTCCC TCTGTTGGAT CCATTACTAA TCGGGATACT GTAGCTGGCC TGCCGCCTAA ACCTACCGCC TTTTCCCTCT CTCGTATCGG TCTCCCACTC AAACCCACAA ATCCAACGCC ACTCAAACGT AGCATGGCTG CTCTTGACGA CGAAGATACA TCTGACCGCA AACTTCAGAA GCTCGATCTA CCTGATTTTG ATCCTGAAGT CCAGTCAGGA GACGCGGCTC AGGTGGGCTC CATTGGTGCA GACTTGGCAG TGGCGGATGG AGATGAAGAT GATGATACGG TGGTGAAAAA GGAGGAGGAG AAGGAGGAGA AGATGGATAT AGACAAGAAA GCGGAAGAAG ATGAGGAAGA GGACCCGTTG GATGCGTTCA TGAGAGACAA CGTGCAGCAG GTCGTAGAGG TGAACAAGGC GGACGCCAAG CGAATGGGGT TGCGGGTTGC TGAGGATGGC AGCGACGACG AAAATCAGGG ACAAGTCGTG GAGAAGGATA AGCTTGCCGA AGCGGAGGCG TTGTTGCAGT GCGTTTCATT TTTCTCCAAA CCAAAGAGCA TATGCTTACA ACTCATTGAA GACAAGCTGC GGCTAAATCA CGCAAGAAAG ATCTTCCTCC TCCTGACCAT TCCAAGATCG ACTATGAACC TTTCCGCAAG GCTTTCTACG TACCGCCTGT TGAAGTATTG GAGATGGATG AGGAAGAGGC TGAGTTAGTG CGTTTGGAAA TGGACGGCAT CAAAATTCGA GGACAGGATG CTCCAAAGCC AGTTAGGAAC TGGGGCGCCT TTGGCCTGCC TCAGGGGTGG TAAGTCTATC ATCTTATTGT ATGCGAAATA CAATATTCTG ACGTTTAATA GCCTCGATGT AATCAAGCAC CAAGGTTGGG AAACACCCAC GTCCATTCAA GCTCAGGCTA TCCCAGCTAT AATGTCCGGC CGAGACGTCA TCGGTATTGC TAAAACCGGT TCCGGTAAGA CTGTTGCTTT CCTCTTGCCA ATGCTCCGTC ACGTTCGCGA CCAAAGGCCT GTGTCCGGTA GTGAAGGGCC TATTGCGGTT GTCATGTCAC CTACCAGGGA GTTGGCCTCT CAGATTTACA AAGAATGCCA GCCCTTTCTT AAGGTGCTCA ACATTAGGGT AAGTTCAGGT CTTCCTAATT AAAGACTGTC GAGCTAAGTT TTGCATGTAG GCTTCCTGCT GCGTCGGCGG TTCGTCAATT AGTGAGGATA TCGCTGCCAT GAAGAAAGGT GCCGAAGTGG TTATTTGCAC TCCTGGCCGA ATGATTGACC TTCTCACCGC CAATAACGGC CGAGTCACAA ACGTCCGACG CACCACTTAC ATCGTTATGG ATGAGGCCGA CCGAATGTTT GATATGGGCT TTGAACCTCA AGTCATGAAA ATTATCAATA ATGTTAGACC GAGCGCCCAG AAGGTTCTAT TCTCAGCAAC ATTCCCCAAG ACAATGGAAT CACTTGCGAG GAGAATTTTG GTGAAGCCTT TGGAGATCAC AGTCGGAGGC AGAAGTGTTG TTGCACCCGA AATTGACCAG CGTGTCGAAG TGCGTGATGG TGATACGAAG TTCACACGTT TGCTTGAAAT TCTTGGTGAG ATGGGCGAGG AGCACAAGGA CGAAGATGAT TTCCGCACCC TTATCTTTGT AGACCGTCAA GAAAGTGCGG ATGATCTATT TAGAGAACTG CTACAGAGAG GTTATGTCTG TGCTTCACTG CACGGCGGTA AAGAGCAGGT CGATCGAGAT GAAGCGATCA AAAACTTCAA GAATGGTGAT GTGCCTATAA TTGTGGCGAC TTCAGTAGCG GCAAGGGGTT TGGATGTAAA AGAGTTGAAG CTTGTCATTG TGAGTTTCTC GTTTGTCCAT CATGAGGCTG TATGCTGATT CTTCAAAAGA ATTATGACGC ACCTAACCAT ATGGAAGACT ATGTTCATCG TGCTGGCCGA ACAGGTCGTG CGGGGAACAA AGGCACTTGC ATAACATTTA TCACGCCGGA GCAGGAAAGG TTCTCCGTCG ACATCGTACG AGCTTTGGAA GCGAGTAAGG CATTCATCCC CGATGACCTG AAAAAGATGT CGGATTGTAA GTAGACTTTT TACCCTTATG ATGAAAATCA CTGATGGTAA ATTAGCATTC CTCGGTAAGA TCAAGTCTGG CAAAGCCCGA GCAGCTGGTA GTGGATACAG TGGTAAAGGT CTCGAGCGAA TCGAACGCCG TCGGGAGGAG AAAGACCGAG CTGAAAAGAC CACCTACGGC GATACGTCTG AAGCCCTGTC ACTCTCCTCG CGTGAGGGTG CTGTCATCCC CTACAAAGCC AAGACGAATG AGTTCAAGCC TCCAGAGACC TCTCACAAGG GTGAAGCAGA CTATACATTC ACAGAAATCA AGGTTGATAT CGTCAATGGC CCTGCGCCGG ACCGCGTGTC CTCTCAACCT GTATTTAACC CGAAGAACGC CGTGGCCTCT TTGCCAGCAC AAACACTGGC GGCACTGGAG AAGGCAAAGA AGGAGGGCCG AGGCGTAGAT GCGGCGAATC TGGCAAATGT GGTGGCCAAA CTTACCCAAT CTATCGAACT CACCAAAGCC GAGAAACTTG GTCTGGCGGC AGCCACCTCT GCACCTCGTC TTGCTCCTGG TGCGAGAACA AAAGATCCCG ACGCTACCGA CTGGCATGCT ATTTTCCCCA TCAATGATTA CCCTCAAAAG GCTCGTTGGA AGGCTACCAA TAAGGAGCAA ATGACTTTGC TGCAAGAAGT TTCAGGAGCA AGTATCACAA TGCGAGGCAG ATTTTACCCG CCTGGGGAGG AACCTGCGTT GGGTGGTGAA CCCAAGTTGA GTCTGTTGAT AGAGAGCAAC GACGAAATGA GAGTGAGGGC TGCTGTAGAA GAAATTCGAA GGGTGCTGGT CGAAGGATCA GTACAAGCAC TTAATGCGGT CGATAGAGCG GGTGCGAGTG GCGGGAGGTA CGCTGTGTAG
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Protein sequence | MPRSPYRSSN RSYRSPSPSR YDRSHPSSSS RRQDDRKASR YDDDYSRDRE RDRERERDRT RDYRDRDRDY DRRRDKDRYR DDDRDRRRRD DKDDRRREER DRGSDRKRDS ERRSPMSTIR VDPIVSLASP VPETEEEKKR KAKERLETWK RQRALKEGKS AAATPEPKST APPPVTSGLP PKPTAFSLSR IGLPLKPTNP TPLKRSMAAL DDEDTSDRKL QKLDLPDFDP EVQSGDAAQV GSIGADLAVA DGDEDDDTVV KKEEEKEEKM DIDKKAEEDE EEDPLDAFMR DNVQQVVEVN KADAKRMGLR VAEDGSDDEN QGQVVEKDKL AEAEALLQQA AAKSRKKDLP PPDHSKIDYE PFRKAFYVPP VEVLEMDEEE AELVRLEMDG IKIRGQDAPK PVRNWGAFGL PQGCLDVIKH QGWETPTSIQ AQAIPAIMSG RDVIGIAKTG SGKTVAFLLP MLRHVRDQRP VSGSEGPIAV VMSPTRELAS QIYKECQPFL KVLNIRASCC VGGSSISEDI AAMKKGAEVV ICTPGRMIDL LTANNGRVTN VRRTTYIVMD EADRMFDMGF EPQVMKIINN VRPSAQKVLF SATFPKTMES LARRILVKPL EITVGGRSVV APEIDQRVEV RDGDTKFTRL LEILGEMGEE HKDEDDFRTL IFVDRQESAD DLFRELLQRG YVCASLHGGK EQVDRDEAIK NFKNGDVPII VATSVAARGL DVKELKLVIN YDAPNHMEDY VHRAGRTGRA GNKGTCITFI TPEQERFSVD IVRALEASKA FIPDDLKKMS DSFLGKIKSG KARAAGSGYS GKGLERIERR REEKDRAEKT TYGDTSEALS LSSREGAVIP YKAKTNEFKP PETSHKGEAD YTFTEIKVDI VNGPAPDRVS SQPVFNPKNA VASLPAQTLA ALEKAKKEGR GVDAANLANV VAKLTQSIEL TKAEKLGLAA ATSAPRLAPG ARTKDPDATD WHAIFPINDY PQKARWKATN KEQMTLLQEV SGASITMRGR FYPPGEEPAL GGEPKLSLLI ESNDEMRVRA AVEEIRRVLV EGSVQALNAV DRAGASGGRY AV
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