| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNB00260 |
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| Symbol | |
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| ID | 3255871 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006684 |
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| Strand | - |
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| Start bp | 74295 |
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| End bp | 77432 |
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| Gene Length | 3138 bp |
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| Protein Length | 920 aa |
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| Translation table | |
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| GC content | 60% |
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| IMG OID | 638254677 |
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| Product | ER to Golgi transport-related protein, putative |
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| Protein accession | XP_568767 |
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| Protein GI | 58262714 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5028] Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00276078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GCTCCCTCCG CCGTCCCCGC GTATCCAATG TCCCAACCGA TCATGCTCCC CCAGGGCTGG
GAAGCCAGAT GGTACGCCGC CCCCCGCCCG CCCGCGCTGA CGTAACGCAG GGATCCCCAG
GCGAACGCCT ACATCTATGT CGACCAGAGC ACAGGCAGGT CCCAGTGGGA GGTCCCCCTC
AACCCCACCT TCCCCACCTC CCCCACCCCG CACGCCCCCC CCCAGCGCCA CGGCCGCCGG
GCCTACCCCT CCGCCATGTA CGCCCACGCC TACGACACGC CCGCCCCGCA CGTCGGCCCC
CCCCAGCCGG TCGCGGGCTA CGCCGAGCAG GGCACACCGC AGTTCATCAC CCCCGGCTTC
GAGGGCCAGC AGCCCGTGCA GCAGCCGCCG TACGCCGCTG TGGACCACGT CGCCGGCCAG
TTCCAGCAGA TGAACATTGC TCCCGGCGCC GCGCCCGTCG CTGGCGCGGC TGCCGGTGCG
TACCAGGGCG CGGGCTATGC CGAGAAGCAG CTGCACTCGA CAAAGACCAA GACGGTCAAC
CTGATAGGTC TCCAGCCGGA CGTCGCCGCG CTCGACAACC CGCCTCCGCC TGCCCTCCTC
CCCGCCAACG CGAGCGTCAC GTCGTCCGCC CACTCCCAGC CGGATCCGTC GTACCAGCGC
TGCACCCTCA ACGCCATGCC CACCACGCAG TCTTTGCTGA ACAAGTCCAA GCTGCCGCTT
GCGCTCGTCA TGGCGCCTTA CCGATCCATT CGCGAGACGG ACAATGATCC CGATGTGCCG
GTGGTCGAGG ACGGCGTGAT TGCGCGATGC AGGCGGTGCA GGGCGTACAT CAACCCGTTT
GTCACGTTTA TCGAAGGCGG GAACAGGTGG AAGTGCTGCA TGTGTGGTCT GAGCAACGAA
GTGCCGCAGC TGTTTGACTG GGACCAGCGT GCAGAGAAGC CGGCGGACAG GTGGGCGCGC
AAGGAACTGA ATCACGCCGT CGTCGAATTC GTCGCGCCGA CAGAGTACAT GGTCCGGCCG
CCTCAGCCGC CCGTATATGC CTTTGTCATT GACGTTTCAT CCGCTGCGAT CCAAAGCGGC
ATGGTCGCCG TCGCCGCGCG CACCATTCTC GAATCACTCG ACTCGTTGCC GAATGCCGAT
AACCGCACAA AGGTCGCCAT CATCGCCGTC TCCACCAGCC TCCATTTCTT CTCCTTGCCC
GCCGACGCGA CCGAAGCCGG CATGCTCGTC GTCCCCGACC TGACAGACGT CTTCCTCCCG
AAACCCGTCG ACTTGCTCGT CAACCTGACC GAATCTCGCC CCGCTATCGA ATCCCTGCTT
GCCAAGCTGT CAGACATGTT CCAAGACTCG CACACCGTCG GTTCCGCGCT CGGCTCGGGT
TTGCAGGCCG CCCACCAGCT TATTGGGAAG ATTGGCGGTA AGATTATCGC GCTGGGCGCT
TCCCTCCCGA CCATTGGCGA GGGTGTGCTC AAGGCGCGAG ATGATCCCAA GCTGCTCGGT
ACATCGAAAG AATCTCAGCT CCTCAATGCC GGCAACAACT GGTACAAGAC GTTTGCGATC
GAGTGTTCCA AGAACCAAGT CTCGGTCGAC ATGTTCCTGT TCAGCGGGAC GTACACCGAT
GTCGCCACAC TGGGTTGTCT GCCCCGATAC ACTGCCGGCC AGACCTATCT CTACCCAGGC
TTCAACGCCT CGAGGAGCGA GGATGCGATC AAGTTTGCGA CCGAGTTTGG TAAAGTGCTG
GCGATGCCCA TCGGTCTCGA GGCGGTGATC AGGGTCCGTG CGTCGAGGGG GATCCGCATG
TCTGCCTTCC ACGGCAATTT CTTCATCCGA TCGACCGACC TGCTCGCGCT GCCCGTCGTA
CCGCAAGACC AAAACTATGT GATCGAGCTC CAGATCGAGG ATGATATCAA GGGCTCATTC
GTCGTCATCC AAACCGCTGT TTTGCATACC ACATGCTATG GCGAACGACG GATCAGGGTG
ATCACCCAGG CGATGCCGAC GACGGACAGT ATCGCCGAGC TGTACACCTC GGCGGACCAG
ATCGCGCTCG CGACCTACCT CGCCAACAAG GCTGTGGAGA GAAGCATGTC ACACAGCCTG
GACGATGCGC GGAACCACGT CACAAACAGG CTGGGAGAAA TGTTGACGGT GTACAAGAAC
CAGGTGACCT CTGCCGCCGG CGGCGCCTCC GCCCAGCTCG CCGTGCCTGA AAACCTGTTG
CTCCTCCCCC TGCTGTGTTG CGCGCTGACA AAGCACGTCG GACTGCGTGA AGGCGCCTCG
ATCCCTCCAG ACTTGCGGGC CTATGCCCAA TGTCTGCTCA CCACGCTTCC CTGCCAGACG
CTGATTCCGT ATATCCACCC GAGGTTTTAC TCTCTCCATA ATATGCCGCC CGAGGCCGGT
ACGATTGGCG GCGATGACGG GGCGATGATA TTGCCCCCGG CGCTGAACCT CACGTCGGAG
AAACTCGAGC GCCACGGTTT ATTCTTAATC GAGGATGGAC AAAACATCTT CCTCTGGGTC
GGGCACGACG CCGTCCCGCG CTTGATCCAA GACGTCTTTG ACCTCGCGTC ATACCACGAA
CTACAGGGCG GGAAATATAC CCTCCCGAGA CTGGATAACC CCTTCTCGGA GAGGGTGTGT
AATGTGGTGG ATAAGACGAG GGAGATGAGG AGGGGAGTGT ATAGGCCGCA GTTGTATGTG
GTGAAGAGTG ATGCCGAGCC GGCGTTGAGG AGCTGGGCGT TGAGTTTGTT GGTGGAAGAT
CGGATGGATA GGATGTCGAG TTATGCGCAG TATTTGACGA CTGTGAAAAG CAAGGTGGGT
GGTTTTTTTT TTTTTTTCTT TTTCTGGGAA AAAAGCTGAT GCGTGTGTGT GGTTTAGGTG
AATGGCAGTT AGAGTCAACC GTGTTTAGAT GGATGACTGG TGTTTGGGGC TTGGGATCGA
GGTCTAGGTT TAGGTTTGGG ATTGGGGGAT TGGGATTGGG ATTGGGATTG GGGATTGGAG
TACGCCACAA GAGCATGAGG ATGGGGAAAT GATAGTGGTG AAACGGGGCG TGATGGAAAA
GCCAGATGTG CATGGTTTAA TCAATTGGTA GTGATAAAAA ACAGAAAAGG GGAGCGTATG
TGAATCGATT TTGAGAAT
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| Protein sequence | MSQPIMLPQG WEARWDPQAN AYIYVDQSTG RSQWEVPLNP TFPTSPTPHA PPQRHGRRAY
PSAMYAHAYD TPAPHVGPPQ PVAGYAEQGT PQFITPGFEG QQPVQQPPYA AVDHVAGQFQ
QMNIAPGAAP VAGAAAGAYQ GAGYAEKQLH STKTKTVNLI GLQPDVAALD NPPPPALLPA
NASVTSSAHS QPDPSYQRCT LNAMPTTQSL LNKSKLPLAL VMAPYRSIRE TDNDPDVPVV
EDGVIARCRR CRAYINPFVT FIEGGNRWKC CMCGLSNEVP QLFDWDQRAE KPADRWARKE
LNHAVVEFVA PTEYMVRPPQ PPVYAFVIDV SSAAIQSGMV AVAARTILES LDSLPNADNR
TKVAIIAVST SLHFFSLPAD ATEAGMLVVP DLTDVFLPKP VDLLVNLTES RPAIESLLAK
LSDMFQDSHT VGSALGSGLQ AAHQLIGKIG GKIIALGASL PTIGEGVLKA RDDPKLLGTS
KESQLLNAGN NWYKTFAIEC SKNQVSVDMF LFSGTYTDVA TLGCLPRYTA GQTYLYPGFN
ASRSEDAIKF ATEFGKVLAM PIGLEAVIRV RASRGIRMSA FHGNFFIRST DLLALPVVPQ
DQNYVIELQI EDDIKGSFVV IQTAVLHTTC YGERRIRVIT QAMPTTDSIA ELYTSADQIA
LATYLANKAV ERSMSHSLDD ARNHVTNRLG EMLTVYKNQV TSAAGGASAQ LAVPENLLLL
PLLCCALTKH VGLREGASIP PDLRAYAQCL LTTLPCQTLI PYIHPRFYSL HNMPPEAGTI
GGDDGAMILP PALNLTSEKL ERHGLFLIED GQNIFLWVGH DAVPRLIQDV FDLASYHELQ
GGKYTLPRLD NPFSERVCNV VDKTREMRRG VYRPQLYVVK SDAEPALRSW ALSLLVEDRM
DRMSSYAQYL TTVKSKVNGS
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