| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNN01640 |
|---|
| Symbol | |
|---|
| ID | 3255481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006683 |
|---|
| Strand | + |
|---|
| Start bp | 474465 |
|---|
| End bp | 476381 |
|---|
| Gene Length | 1917 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | 638254579 |
|---|
| Product | D-arabinono-1,4-lactone oxidase, putative |
|---|
| Protein accession | XP_568647 |
|---|
| Protein GI | 58262474 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01678] sugar 1,4-lactone oxidases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTCCCTCACC ACCATACATC CAGAAAACAA TAAACCAAGA TGCAAGACCT CACGGCGGTA
GACAACCATG CGCTTCAAGC AGCTCTCCAC CCCATCTCCG TCTCCTCCAG CTCCCCGCTC
GCCACTTTCT CCAACTGGGC CAAAACGTTC AAGTGTAAAC CACAACGTGT CTTTGTGCCG
ACCACCGCCC TCCAGTGTCG ACAGATCCTA GAGCTGGCGA GGAGGGAGGG TGCGAGGGTG
CATCCTGTTG GCGCAGGCCA TTCACCGTCG GACTTGGCGT GTACGAACGG GTGGTTGGTG
AGGATGGAGG GGCTGAGGGG GACCGTCAAG GTAAGCGTTT TTTTCCACTT CTTCTTTGGC
GCTGCCTTGC CTTGGCACTG GCGGGCGCAA TGTCCAGCAT ACGCATACGC CAGCGGCTAA
CAAGGACATT ATACTATACC CACAATACAG ATTGACAGCG AGAAACACAC CGCCACCTTT
CTCGCCGGAA CGACCCTCCA CGAAGTCCAC GCTTCGCTCG CTTCCTCCGA TCCCCCACTC
GCTATCCCCA ACGTTGGCTC CATCTCTGAC CAAACGATCG CTGGTCTCAT CTCCACCGCC
ACCCACGGAT CGGGCGTCAC TTTCCCCGTC TTATCAGCCC ACGTCAAATC CCTCCTCCTC
GCGCTCCCTC TCCCCGGTAC CCCGCTTGTC AGAGTCTCAC AGAGCGAAGA TGAAGAGCTG
TTCAAAGCTA GTTTATGTGG TTTAGGAGCG ACCGGTTTGA TTTTGGAAGT AGAGATCGAG
GTGGAGGACG CGTTTAGGTT GAGGGAGACG AAAGAGGGGA AACGGGTGGA AGAGGTGCTG
GAGAGTTTGG ATGAGATTAG GAAGAGTGCA GAGCATGTGA GGGTTTGGTG GTACCCGTAT
GGGAAGGGGG CGGTTGTTGG ACGGGCCAGC AGGACTTATG AGGTACGTCT TTCCTTTTAT
ACCATGCGTC GCTCGAAAGC TGATGGAAAA TGGTTAACAT GAAAAGCCTG CTCAACCTAC
GTCCGATCTT GTGGGACATA TCCTCGGCTT TCATGTTACC CAGTTCTTCC TCTACGTAGC
ACGCATCTTC CCTTCCTTGA CGTCCTTGGT CGGCCGCTGG GCGTGGTGGC TCTCAAAAGA
AGACAGCGTC ATGGTCGATG ATGGTTACAA AGTTCTCAAT TTCGACTGTC TCGTACGTCT
CGTTTTCACC CCTTTTCCAT TTTTCCTCTT CTGCAGACAG GCAACAACAA AGATGAGAGC
TGACCAAAGT ATACATTTTC TTTTTATTTT ACATCCTAAA TAGTTCCCCC AGTACGCCTT
GGAATGGGCC ATCGACGCCA AAGAGGCCAA AGCATGCTTG CAAGAAATGA AAAAGTGGTT
GGACCGCGAA GCCGCCGATC CCGCCGGTCT CCGTGTCCAC TTCCCTATCG AGATCCGTTG
GTCTTGCGCC GACGACATCT GGCTCAGTCC GTCATACGGC AGGGATACCT GCTGGATCGG
TGTAGTCACC TACCGTCCGT ACGGTCTTTC TGTGCCTTAC CGCCAGTTCC ACGAAAAGTT
TTCTTCCCTC TTAAAGTCCT ATGGCGGAAG ACCGCACTGG GCGAAACAGC ATATCTTGGG
ACCCAAGACG CTAGAGGTGA TATACCCGAA ATTCAAGGAT TTCCAGCAAG TGCTGAGGAG
GGTGGATCCC AGTGGTGTGC TTTTGAGTGA GAATGTGCGT AGACATGTGC AGGGTGAGAG
TATCCCGGAG AGTCTGTTCG AAAGACGTTG AGTGTTGGGC CATACGGTGA ATAGGGCGTG
AGGTAAATGT GTTTGAGGGA GTACCGGGAG GGGAAAAAAA TGGATTCATG TTTTTATTAA
CGCAACACAA ATTCCAAAAT TTCGGTGATA AGTACTGTAC AAAATCATGC ACCATTG
|
|---|
| Protein sequence | MQDLTAVDNH ALQAALHPIS VSSSSPLATF SNWAKTFKCK PQRVFVPTTA LQCRQILELA
RREGARVHPV GAGHSPSDLA CTNGWLVRME GLRGTVKIDS EKHTATFLAG TTLHEVHASL
ASSDPPLAIP NVGSISDQTI AGLISTATHG SGVTFPVLSA HVKSLLLALP LPGTPLVRVS
QSEDEELFKA SLCGLGATGL ILEVEIEVED AFRLRETKEG KRVEEVLESL DEIRKSAEHV
RVWWYPYGKG AVVGRASRTY EPAQPTSDLV GHILGFHVTQ FFLYVARIFP SLTSLVGRWA
WWLSKEDSVM VDDGYKVLNF DCLFPQYALE WAIDAKEAKA CLQEMKKWLD REAADPAGLR
VHFPIEIRWS CADDIWLSPS YGRDTCWIGV VTYRPYGLSV PYRQFHEKFS SLLKSYGGRP
HWAKQHILGP KTLEVIYPKF KDFQQVLRRV DPSGVLLSEN VRRHVQGESI PESLFERR
|
|---|
| |