Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNM00220 |
Symbol | |
ID | 3255072 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006682 |
Strand | - |
Start bp | 48468 |
End bp | 50981 |
Gene Length | 2514 bp |
Protein Length | 535 aa |
Translation table | |
GC content | 48% |
IMG OID | 638254181 |
Product | conserved hypothetical protein |
Protein accession | XP_568386 |
Protein GI | 58261952 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.339373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CATTTTCACA GCATCAATCT ATATCAACCC ATTCCCCTAT TCCTTGGAGC TAGTTCATGG ATATGTATTT CCCAGAGCAT ACTCCAACAC CCCTCCCGCA GATTGAACAG GTCAGCTCTT CTTTCGCTCT AAGCAATCTA AGCAATCTCG CTAACTCGAA CTCGAACTCG GATCAACAGA TCTACGATAC CGTCAACAAA CGCTTCGACT CTGGAGTTAC CTGTTCTCTC GCGTACAGGC TTTTCAACCT CAAGCAACTA GCTTATCTTA TTAAAGATAA TGAAGCGCTT ATTCAGGCAG CAGTTGAGAA TGATCAAGGC AAAGGACCTT TTGACGTGAC TATTGGAGAG GTATGTGAAT TATATAACCC AGTTACCCGA CACTGCATGC TGACAAGTGT ATGCACAGTT GTGGCCGGCG TTGAATGAGA TTGATCTTGC AGTTAAGAAT GTGGAGAATT GGATGAAGGA TGAGAGCCGC ACTGCTGACG CAATTCTATC TATGAAGGCG ATGCGTGAGT TATCGGACGA GCAAAGGTTT TGTATTGACT TTATTAGCTT CGCGGGTGAA AAAGCAGCCC AAAGGGGTTG CCTTGGTGAG TCACTCTTTT GGTGTCATTA GAGAATTGCT GATAGTTCAC TTCCAACTGC AGATCATCAG TACATGGGTA TGCTGGCTCG TACAACCCTC TCTTTGCGGC AAAACTGATC TCATGTTCGG TAGAACTACC CATGGCAACT ATCTCTTTGC CCACTCGTAG GAGCCATCTC AGCCGGCTGC CCTGCTATTC TCAAACTTTC CGAACACTCA CCCACGTCAT CTGCCCTTCT AGCCGATCTT CTACCAAAGT ACCTCGACCC GGAGGGGTAT GTCGCGGTCC TTGGAGAAGT GGAGCAGTCA CAGGCATTAC TGGTAAAACC CTGGGGACAT AGTGAGCTAT TGATCTATCG GAAATGGAGA AAAAGCTGAT CAGCTGTAGT TCTTTACACA GGTTCATCTG GAGTGGGCAA GATTGTCGCT GGAGCCGCTG CCAAGACGCT CACCCCTACC ACTCTCGAAG TAAGTGTGCT CAATCGTGCA CTTCCGGAGA TAATGAAGAC TGATGAACAT TCTAGCTTGG TGGCAAGAGT CCAGTAATCG TCGCGTCAGA TGCCAACTTC AAGATTGCAG CTAGAAGATT GTTCAGCATC AAGCAGATGA CCGGTGGCCA AATATGCGGT AAGCCCTTTA AGCCCTTTCT TTACCCCTTT TTTATATATT CCTTGCAAGC TGCAGTTTGA TGCCATTCTT AGTTGCCCCT GATTATGTTC TTTGCGTCAA GGACAAGGTT GACGAATTTA TCTCCGTTTG CAAGTCCACG TACGTCCAAT TTCACCATCC CCCTAGTCAA CTCTAATGCA CAATCAGACT TGATGAGCTC TTCCCTCCCT TACCTTCCTC TAAATCACTA CTCAGCTCCC CATCCGGCTC CTCGTTTCTT CGTTCCCCCG CCGATTTCTC TCGGCAACTA TCATACATCG AAAAAGCTGA AATGGAGGGT AAGCTCGTGT ATAAAGGGGA GATGGATGAG AAAACAAGGA GGATGGGAAT ATCCCTTATC AGACTAAACG AGAATGGGGA ACGGGAGGAG GGAGGCGTGA TGGTGGACGA GATTTTTGGT CCTGTTCTGG CTATCATTCC TGTTGAAGTG GGTCTAATCT CATCTACTAA GTGAATGAAG GATAAAGCTG AAAATACAGG TAGGATATTG ACGGGGCTAT TGCGTATGTG AACGCGCGTC CTAAGCCCCT TGCTTTATAC GTCTGTGCCG GCAAACGATC TATCTTCGAA AAAGGTGAGT AGACTTCGAA GTGACTTTCT GATATCTCAC TTACAACCCA ACTTGTTAGT TATTTCGCAG ACGACGAGTG GTTCTGCGAC TTGGAATGAC TTTGCTATGG CCACTTTTGC CCGTAACCTT CCATTTGGAG GGGTGGGCGC GAGTGGATGG GGTTCATACC ATGGGAAAGA CGGCTTTAAC GCATTCACGC ATCACAAAGG TGGGCCCTTT TAATTCCCTC ATGGGTTGTA GCGCAAACCA TGTTAATCAC CGCGGAGCAG CCGTACTTGA GATCCCATAC CTGCAAGTTC TTTCCCAACT CCTCAGTGCA CATGCTGACC CATTCATACT AGATTCGAAC CTCTCATATC CCTCCGTTAT CCCCCCATTT CCTCCTTAGC CAAGAAGATA TTGCCGTTCC TCATGTTTGC CGGTATCAAA TTTTCCCGAC CGAAGTCCAT TGAGCATGAA GAAGAGTCGC TGAGAAGGAG GAAATGGAGG TGGAGGGTGA TTGTGTTGGG ATTTTTGATG GGTGCGTTGG TTGGAGGAAA GCGATTGCTG GGAAATGGTC AATAGCGCTG TTGGGGCTGC CCTTTCCAGC TTTGCGACCT GATACGAGGG GGCAAGGGTT AGCGTTGTTA TTGTTGTTGA GTGAGAAAGG GATTCCGCCG GAAAATAGCT GAGTTGGGTA ACGT
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Protein sequence | MDMYFPEHTP TPLPQIEQIY DTVNKRFDSG VTCSLAYRLF NLKQLAYLIK DNEALIQAAV ENDQGKGPFD VTIGELWPAL NEIDLAVKNV ENWMKDESRT ADAILSMKAM PSRVKKQPKG VALIISTWNY PWQLSLCPLV GAISAGCPAI LKLSEHSPTS SALLADLLPK YLDPEGYVAV LGEVEQSQAL LVKPWGHILY TGSSGVGKIV AGAAAKTLTP TTLELGGKSP VIVASDANFK IAARRLFSIK QMTGGQICVA PDYVLCVKDK VDEFISVCKS TLDELFPPLP SSKSLLSSPS GSSFLRSPAD FSRQLSYIEK AEMEGKLVYK GEMDEKTRRM GISLIRLNEN GEREEGGVMV DEIFGPVLAI IPVEDIDGAI AYVNARPKPL ALYVCAGKRS IFEKVISQTT SGSATWNDFA MATFARNLPF GGVGASGWGS YHGKDGFNAF THHKAVLEIP YLFEPLISLR YPPISSLAKK ILPFLMFAGI KFSRPKSIEH EEESLRRRKW RWRVIVLGFL MGALVGGKRL LGNGQ
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