Gene CNL05890 details

Gene Information

• Locus tag: CNL05890
• ID: 3254997
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006681
• Strand: -
• Start bp: 636336
• End bp: 638440
• Gene Length: 2105 bp
• Protein Length: 492 aa
• GC content: 50%
• IMG OID: 638254065
• Product: conserved hypothetical protein
• Protein accession: XP_568122
• Protein GI: 58261424
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1231] Monoamine oxidase

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.314478
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CATCGATAGG CCCTCAGTGC GCTTATCATC TTAATCCAGT GTTTACGCGG GTCCCGCTAT 
TTGACTTTCG CTGCACATGA TTCGTCTCAA TTCTCACGAC AGAAGTCCCT TATCAACGAC 
AACGCGGCTT AGCGGCTAAG TCCTGAACCG AAATGGGAGA AATAGCGACA CATGTCAATG 
TGCTGTCACC ACTTCCTTTG ACAAATAGAT GGGTTTGTCG GGAGGCGGCT GGTCGGCTTC 
TGCCCATCGT TTTGGGACAA TGTTCGATTC GCAAGTACGG TGGATGCACG TCGCTGAACT 
ATATAGATCG CTCCATACGC ATCAATTGAC GCAGCCTTTA TCTCTCAAAT CAATCAGGTT 
CCTCAATCTC AACCCCCAAA GATCTCTTTT CAACCGCCCT CTTCATCATG GTCACATCCG 
TCGTCAGTTC AGTTAATGAT AGCTTTGACG GTCTCGCTAT CGCACCCGAA GCCGATGTTG 
TCATCATTGG TGCAGGCCTT GCAGGTCTCT GTGCTGCACG TTCACTTCAC GAGGCCGGGA 
AGCGGGTAGT CGTTCTAGAA GCCAGAGGCC GAGTGAGTAT GCCTCCGCAT GTTTTCCTGA 
TGAAGCTGAC GAGCAATAGG TTGGTGGTAA GACTCTCACT GTGACAAGCA AGTCTGGAGG 
TCGCGTGGAT GTCGGCGGCG CTTGGGTCAA CGAGTGAGTA ACAGCAATCA AGCGCAAAGA 
TGTGCTAATA TCCGCTAGAC ATACCCAGCC AGAGGTCTGC AAGCTCAATA AGGAGGCAGG 
AAACATTCTG TTCAAACAGC GCGTCCTAGG TACCACATGC TGGGAGTTAT CAGAGGACCG 
ACAACTTCGT TATTACGATG GTGAGTAACC TTTCGTTGCT GCAATGAAAA TTTCTGATTT 
TTTCCAGATG GCGGTGTTGG TGACAACTCT CCTATCCCTC TTGAAGGTGA AGAACTGGAA 
GACTACAACC GAATTTTCAA GGAGCTCGAC CGCTTATCGC GAACTGTCAG TCTCAAGAAC 
CCCAACGACA CCCCTGGCGC GGTCGAGTAT GACTCTGTCA CTGTTGCAAA CTGGCTTGAC 
CAAATGGATG CGGGCCAAAT CAGCCGACAG GCTCTTATAC CTCTTGTCCG AGCTTTGGTT 
GGCGCTGAGA TGCATGAGAC CCCTCTCTTC TACTTCTTGC ACTACGCCAA GACTGCCAGT 
AAGTCGTATC TATAAGATAC CCTACTTATT AGGTAACTAA AATTATTGTT TGCAGAGGGT 
TTCTTTGACT TGATTGCCGC GGATGAGACC GGTGGTCAAT TCCAACGTAC TCGTTACGGA 
AACCAGACCA TGTCAACTTG GATCCAGAAC CACATCCTTC CTCCAGGAGC AGTCAAGCTC 
AACGCCGCCG CTCATCAGAT CATCCAAAGT CCCGATGGAG AGTCTGTTCG AGTCATTACT 
CGTGACGGTC GTCAGTTCAC TGGTCGGCGT GTGATTTGCT CTATTCCTAC ACCATTGTAC 
CCCAACATTG TCTGGCAGCC ATCCCTTCCG GTTGATAAGA CGCTTCTGGT TCAGCGGTCT 
TTCCTTGGTA CTTACACCAA GGTAGTTTTA TTGTACGAGA AGGCTTGGTG GCTTGAAGCC 
GGGTTCTCAG GCTTTGCGCT TTCTTCCGAA TGGCCCGTTT CATTGGTCTT TGACACTTGC 
GACGGCTGGT ACGGCTCTGA CGACCCTTCT ATCCGACCTC GTCAGCACTC TTTGTCGTGT 
TTCGTTGTTG CCGCCAATGG TGTCGCCTTT TCAGAGCTTT CACGTGATCG AAGGGAACAA 
GTCGTCAAAC AGCAAGTTGC TCGTATGATT GGTAGCCCTG AGTTAGTCAA CAACACGGTC 
GAAGTGCTTG AGTTCCAGTG GATCAAGGAA GAGTTTAGTC AAGGTGCGCC TTGCCCTGTT 
ACCTCGACTG GAGCTTTCAC GCTTTACGGT GACTCGCTTG CGCGACCGCA CGGGCTTATT 
CACTTTGCGG GTTCTGAGTT TTCAGATGTT TGGAAGGGTT ACATGGAAGG TGCTATCATT 
TCTGGCCGAA AGACTGCGAA AGAAGTTTTG GAGTTGCTTT GATATGATTG GAAGTATGCT 
TACAA 

 

Protein sequence

MVTSVVSSVN DSFDGLAIAP EADVVIIGAG LAGLCAARSL HEAGKRVVVL EARGRVGGKT 
LTVTSKSGGR VDVGGAWVNE HTQPEVCKLN KEAGNILFKQ RVLGTTCWEL SEDRQLRYYD 
DGGVGDNSPI PLEGEELEDY NRIFKELDRL SRTVSLKNPN DTPGAVEYDS VTVANWLDQM 
DAGQISRQAL IPLVRALVGA EMHETPLFYF LHYAKTAKGF FDLIAADETG GQFQRTRYGN 
QTMSTWIQNH ILPPGAVKLN AAAHQIIQSP DGESVRVITR DGRQFTGRRV ICSIPTPLYP 
NIVWQPSLPV DKTLLVQRSF LGTYTKVVLL YEKAWWLEAG FSGFALSSEW PVSLVFDTCD 
GWYGSDDPSI RPRQHSLSCF VVAANGVAFS ELSRDRREQV VKQQVARMIG SPELVNNTVE 
VLEFQWIKEE FSQGAPCPVT STGAFTLYGD SLARPHGLIH FAGSEFSDVW KGYMEGAIIS 
GRKTAKEVLE LL