Gene CNL05000 details

Gene Information

• Locus tag: CNL05000
• ID: 3254943
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006681
• Strand: +
• Start bp: 403435
• End bp: 405468
• Gene Length: 2034 bp
• Protein Length: 453 aa
• GC content: 46%
• IMG OID: 638253972
• Product: nicotinate phosphoribosyltransferase, putative
• Protein accession: XP_568039
• Protein GI: 58261258
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1488] Nicotinic acid phosphoribosyltransferase
• TIGRFAM ID: [TIGR01514] nicotinate phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAACAACAGC AATATACGCT TGTTTAGCAC CATGCCGGAC AAGCTACACC TACCCATAGA 
TGATGTCCAG ATCCCCTTCA GTATCCTCGA TACTGACCTT TACAAGGTGT GTTCTCCCAC 
TGCTGCCAGT GCTTCTGCTC ATACAACACA ATCTCCACAC AGCTTACAAT GCAAAACGCC 
GTCCTCCACC ACTTTAGTGA CGCGCATGTG GTCATCAAGT TTACCAATAG GAGTCCTCAA 
ATGCTCTTCT CGAAGGAATG TTTTGACTGG GTACAACAGC GAGTGAATGG TAAGCTTATC 
GGGCTGACTT TTACACTTCA TCTTAGCTGA TTCGATCACA GACCTTTCGA AGCTCAAGTT 
GACTTCAGAA GAACGTAAAG AGCTTTCTAA GGCTTGTCCT TATTTCTCGG AATCATACCT 
AGATTATCTC TCCAATATGC AACTCGACCC TGTCAAGCAA GTAAAGCTCA CTTTCATTCC 
CCAGGGCTCC AACGAGAAAG GAGAAAAGAT GGGTGAGATT GGATGTGTCA TCGAAGGGCC 
TTGGAAGGAT ACTATGTTAT ACGAAGTTCC CGTTATGGCT ATCTGTAAGT TGAAGCGATG 
ATTTCATTGT CCTTACTGAC ATCTTCACAG TGAGTGAAGG ATACTTCAAG TTTGTGGACA 
CCGACTGGGA TTACGACGGG CAGTTTGGTA AATCAAGCCT CGCGACCTAT GTGCATTCCA 
ATACAGCTAA CATTTCACAT AGAACTGGCC AAGAAGAAGG CTTTAGATCT CTTGAATCCT 
CCTGCTCCCA CGACGTCATT ATCGTTCTCT GAATTCGGCA CTCGCCGTCG ACGGAGTTTC 
AAGGCCCAGG ATATCATCAT GCGGGGCCTT ATTGCTGGCC ATGAAGAGTA CAAATCCAAA 
GGAGGGAGTC AGGGGATTTT GAGCGGGACA AGTAATGTGA GCATAGGTTT GCCGATTTGT 
AGCGCCTATC TAAGCTGACA TGCATCAAGG TCTATTTGGC TTTGAAATAC GGCCTCAATC 
CTGTCGGCAC GATTGCCCAT GAATGGATCA TGGCCGTCGG TGCGACTTAT GGATACAGAG 
GGGCTAATGG AAGAGCTATG GATATGTGGG AAGAGGGTAG GGACGTTTAT TGGGCGTTTA 
CTGAGTCCTA TTCGCTAACG CAGGGTTTAG TCTACCCTCC CGGTACCAAG TTTTCCTCTC 
CACTCACCAT GCTCACGGAC ACCTACACTG CCGCGATCTT CTTTAAAGAC TTTATCTCCG 
ATCCCGCTCG TGCTCTTCGC TGGGCCGTTC TCAGGCAAGA TTCTGGAGAC GCCTTCAAGT 
TTGTCGAGGA CGCAAAGGAG GCGTGGAGGA CTATCGAGGA TAAGGCTGGT ATCAAGCGAG 
ACGTTGGGCC GAATGGCGAG GAAGAAGTTG CAAAAGGAAA GAAGGTTATT TTCAGTGACG 
GCTTAGATGT GGAGAAGGCC ATCAAGTTGC AACAAGGGTG TGACAAGGCT GGCATGGCGG 
GTGAGTTCAC CAACTGATTT GACATGTATG TTCATTGACA GTGTTATTAT AGCATCATTC 
GGTATCGGTA CGGACTTGAC CAATGATTTT CGTAAGGCCT CAGATCCCAG TCAAAAGTCC 
AAAGCTTTGA ATATGGTCAT CAAACTCAAC AAGATCAATG GAAAGGATTG TATCAAGTTG 
TCAGATGACA AGGGGAAGGT GCGTTTTGCT ATGACGTACA CTATTGCAGT ACCTGACCAA 
CCTCGCTGTA GCATACTGGT TCTCTTGAAG AGGTTAGGAA AGCTCAACAG GAACTGGGCA 
TTAACAAGAA CTAGAGATAA TGACAACATG AGAGATATTT TACATTACGC GAAATTAATC 
AGTTGTAGAT TTGGCGTTGT GATTCGGCTG TAGCTGTAAT ACATGAACAG CCAGTCCGAG 
AGGAAAAGCT TATTGACCAC CTTACAAACT CTGGTCATAG GGGATAATGG GAAAAGGAGA 
TAGGTCATAG ACTGCTGTAT CCGTAAGACA AGCATTATAC TATGAGCTGC TCGC 

 

Protein sequence

MPDKLHLPID DVQIPFSILD TDLYKLTMQN AVLHHFSDAH VVIKFTNRSP QMLFSKECFD 
WVQQRVNDLS KLKLTSEERK ELSKACPYFS ESYLDYLSNM QLDPVKQVKL TFIPQGSNEK 
GEKMGEIGCV IEGPWKDTML YEVPVMAILS EGYFKFVDTD WDYDGQFELA KKKALDLLNP 
PAPTTSLSFS EFGTRRRRSF KAQDIIMRGL IAGHEEYKSK GGSQGILSGT SNVYLALKYG 
LNPVGTIAHE WIMAVGATYG YRGANGRAMD MWEEVYPPGT KFSSPLTMLT DTYTAAIFFK 
DFISDPARAL RWAVLRQDSG DAFKFVEDAK EAWRTIEDKA GIKRDVGPNG EEEVAKGKKV 
IFSDGLDVEK AIKLQQGCDK AGMAASFGIG TDLTNDFRKA SDPSQKSKAL NMVIKLNKIN 
GKDCIKLSDD KGKHTGSLEE VRKAQQELGI NKN