Gene CNK03340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNK03340 
Symbol 
ID3254677 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006680 
Strand- 
Start bp982556 
End bp983702 
Gene Length1147 bp 
Protein Length190 aa 
Translation table 
GC content55% 
IMG OID638253823 
Producthydrogen ion transporter, putative 
Protein accessionXP_567918 
Protein GI58261016 
COG category[C] Energy production and conversion 
COG ID[COG0636] F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 
TIGRFAM ID[TIGR01100] vacuolar ATP synthase 16 kDa proteolipid subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000569268 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCGGC GCCAGCACAC ATACAACTCA CCACCGCTCT CCCTGCATCC ACCCAGCGAA 
CCCCCCGCAA TGTCCACCGT CGCAGAGCTT TGTCCAGTCT ACGCACCCTT CTTCGGCGCC 
ATGGGCTGCA CCTCCGCCAT CGTATTCACC TGTATCGGCG CAGCGTACGT CCACCGTCAC 
TCCCTCCGCG ACACCGCCCA TGCCTGATGC CTGACCACCA CACAGCTACG GCACCGCCAA 
GTCTGGCGTC GGAATCTCCG CCATGGCCGT CCTCCGGCCA GACCTCATGA TGAAGTGTGC 
CATCCCTGTC GTTATGGCTG GTATCATCGG TATCGTACGT CACCGCTGCT GAAAGTGCAC 
GCACACCGCT GACTCGAGCG AACAGTACGG TCTCGTCGTC TCTGTCCTCA TTTCCGGTAA 
CCGTAAGTCT GCCCGCAAAC AGTGGTAAAG CCGGACAAAG GGTCGTTTGC TGACAATGGC 
CCGTCTCCAT CTCTAATCCT TTTCGCCGTC TGTAACAATC ACACCCGCCG CCCTGTCCAT 
CAACCCATGC TTCTTGTGAT CGTGCTCCTT GCGATTGCCC TTCTTATCGA CACGTCTCCC 
CCCGGCCTTC ATCTTTCGCA GTCGCCTCCC CCATGCCCCT CTACACCGGC TTTATCCAAC 
TCGGCGCCGG TCTCTCTGTC GGTCTCGCCG GTCTCGCCGC CGGCTTTGCC ATCGGTATCG 
TCGGTGATGC GGGTGTCAGG GGTACGGCCC AGCAGCCTAG GTTGTTTGTC GGGATGGTGA 
GTTTTATTTC AAGAGTAAGG AGCAAAGTCT GGGAGCTAAG CACCGCACTG CTACACAGAT 
CCTTATCCTC ATTTTCGCCG AAGTTCTTGG TCTTTACGGG CTCATCGTCG CGCTCATCTT 
GAACACCAAC TCTGCTGTTG ACTATACCGT ACGTCTAGGT CTACTTTGGT TCAAGTTTGA 
GGAATGCCCC GCTGACCCGG TACCGTTTTG TAGTGTTCTA TCGCAGCTTA AACACACACT 
CGTCTTCATC CCCCACACCC CTTTCGCTGA TTTTAGACCG CCGACCTGTT GATTTTTTTC 
TCTCATCTTT CTTGCATTTC AAAGTTGAAT ATATGAAAAA AAGATGAATT ATGAATAAGA 
TGTACCC
 
Protein sequence
MQRRQHTYNS PPLSLHPPSE PPAMSTVAEL CPVYAPFFGA MGCTSAIVFT CIGAAYGTAK 
SGVGISAMAV LRPDLMMKCA IPVVMAGIIG IYGLVVSVLI SGNLASPMPL YTGFIQLGAG 
LSVGLAGLAA GFAIGIVGDA GVRGTAQQPR LFVGMILILI FAEVLGLYGL IVALILNTNS 
AVDYTCSIAA