Gene CNK00940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNK00940 
Symbol 
ID3254423 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006680 
Strand- 
Start bp296390 
End bp297469 
Gene Length1080 bp 
Protein Length344 aa 
Translation table 
GC content50% 
IMG OID638253584 
Producthexaprenyldihydroxybenzoate methyltransferase, putative 
Protein accessionXP_567782 
Protein GI58260744 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID[TIGR01983] ubiquinone biosynthesis O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGGC AACAACTCTG CAGAAGACTA TACTTCTCAC GCTCCGCAAC AGCATTCCCA 
TCAACACGCA TCGCAGCACG CTCAATCACA ACAGCATCCC CAGCATCCCC AGCATCCCCA 
GCATCTCCAT CCACCGCTCC CTCCACTTTC AGCACCATCA ACGCTTCCGA AATCTCCCAC 
TTCTCCAAAC TCTCCTCCCA ATGGTGGTCA GAAACAGGCG AATTTGCACT TTTACATCGC 
ATGAATCCCG TGCGGGTAGA GTGGATCAGG CAAAAAGTCG CTCTCGCTCC TCCACCGGAA 
GAGGAATGGT CGTTTGAGAC TCGGCATATG GATGCGCAGA GAGAAGCAGC GCGAGGTACG 
GGTGCTTGGT TGACAGGTCT TCGATGCTTG GACGTTGGAT GTGGAGGTGG GATCCTCTCA 
GAGGCTCTGG CAAGATTGGG AGCCACTGTG GTGAGCGTTG ATGCGAGTGA AAGTAATATC 
GGCATCGCGA CCACTCACGC CAATCAAGAT CCGTATTTGG CCAAGAAGAT GGAAAAGGGA 
GAGTTGGAGT ACCGATTCAG TACTGCCGAA GCTTTAAGAG ATGCTGGGGA AAAGTTTGAT 
GTTGTGTGCT CCATGGAAGT GCTTGAGCAT GTGGATGAGC CTGGAGAGTT CATGAAATGT 
CTCGGAGAGA TGGTTAAAGT GAGTCCAGGA ATTATTCCAG TTGAACCATG CTGAATAAAA 
CAGCCTGGAG GACATCTCTT ACTTTCAACC ATCTCTAGAA CACCCCTCTC CCATCTCCTC 
ACTATCACTC TTGCCGAAGA CATCCTCCGT CTTGTGACTC CGGGAACACA TACCTACCGT 
AAATTCATCA AGCCCGAGGA ACTCCGACGT TTCGTCTACT CTGACATGGG TGGTTTCAAG 
ACATGGCATA GAAATGATGA CGCAAGTGAT ATCCGGGAAA ATGAAGTTGG TGAGACTCGA 
GGGATAATTT ATGACCCTTT GAAGGGCGCT TGGAGATTGT GGGATGGTGT GGAGGGCAGC 
TGGTGGAAAG AGGCAGGTGA AGTTTGCAAT TACATGTACC ACGCAAAGAA GAGGTCTTAG
 
Protein sequence
MNRQQLCRRL YFSRSATAFP STRIAARSIT TASPASPASP ASPSTAPSTF STINASEISH 
FSKLSSQWWS ETGEFALLHR MNPVRVEWIR QKVALAPPPE EEWSFETRHM DAQREAARGT 
GAWLTGLRCL DVGCGGGILS EALARLGATV VSVDASESNI GIATTHANQD PYLAKKMEKG 
ELEYRFSTAE ALRDAGEKFD VVCSMEVLEH VDEPGEFMKC LGEMVKPGGH LLLSTISRTP 
LSHLLTITLA EDILRLVTPG THTYRKFIKP EELRRFVYSD MGGFKTWHRN DDASDIRENE 
VGETRGIIYD PLKGAWRLWD GVEGSWWKEA GEVCNYMYHA KKRS