| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNK00930 |
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| Symbol | |
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| ID | 3254392 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006680 |
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| Strand | - |
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| Start bp | 290985 |
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| End bp | 295814 |
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| Gene Length | 4830 bp |
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| Protein Length | 1065 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 638253583 |
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| Product | DNA ligase (ATP), putative |
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| Protein accession | XP_567656 |
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| Protein GI | 58260492 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AAAGTTATAT CACCACTGGA AATGGCAGTA CACGCTCCAT ACAATCATGC ACCTCCGCCC
ACTCAAGAAA TAAATGGTCA GAAACCGACA TTAGCCCCCG CGATAACTCT CGAACGTCCA
GCGGACTGTA TCAACCGCGG CCAGTATCCC GCTTTCTACA TTATCTGCGG CTATCTTAAC
AGACTACGGG CAGATGCGCC GCACAAAAAG TACGAGCTTC TGACGAGGAT ATTCGGGAAC
TGGAGGGAGA AAGTAGGGCC AGATCTTTAT CCGTTGATCA GGTTGTTGTT ACCTGATGTG
AGTCTTCGGG TCACGGCAAG AACATAGGGA ATGTGATGCT AAAGGGTTTC TTGCAGAAAG
ATAGGGAAAG ACCCGTGTAT AATTTGAAAG AGTCAATGTT GGCTCGATGC TACATTGATA
TATTGTCGTT AGAGAAGCAC AGCGAGGCGG CTCAGAGGTT GATCAAATGG AAGCAGCCGG
CAGGAAATGT CAGTCGTTCA TGTGTTCCCT CAGTAAACGA ATGTGGAAAC TGATGATTAG
CAGTCACCAA ATCCAACTGG AGACTTTGCG AAAGTCTGTT ACAATGAGAT AAAAGCTCGA
TCCACCGTGG AGGAAGGGCA ATTGAGTGTT GAAGCAGTAA ACATGCTCCT AGATAAGCTG
GCTGTTGGAA AAATGAAGCA GTGAGTTTTA TTGTTCGTCA AGGTATACTC AGCTCAGCTC
ACTGATGATT GATTATAGAA AAGATTACGT GCCGATACTC AAGGCAATCA ATATGCAATG
TACAGCTGAG GAACAAGAAT GGATTATCCG GATTATACTC AAAGGTAAAT ATGTATTTTT
TCCACGTTAT ATTCACTCTG ACAATAATCT TCTCAAGACC TGCATATCTC AATACGTGAA
CGAGGGGTCT TATCAGCGTT TCATCCGGAT GCGATAGATC TGTATAATGT TTGTTCAGAC
CTGAAGCGTG TCTGTTGGAC TTTGTATGAT CCCGGCTTCA GGCTCAATAA AAATGTTTGC
CATTCTTGTT AAACCATCTA TCCCGAGCTG ACGACGATTC AGGAAACGCA TCTTGAATTA
TTCCACTCCT TTCTCCCTCA ATTATGTGGC CGCATGAATG ATGCGTCGCT CGAAAATATT
GCGAAGGCTA TAGGAGCGCC AAAAGAGTTC ATCATGGAAG AAAAGTTGGA CGGGGAGAGA
ATACAGTTAC ACATGAGAGG AAATGGTGCA CAATGGTTCT ACTGTTCAAG GAAAGCTAAA
GACTATAGTA AGTTCCTTCC GACTTATTTT TGAGTACTGG ATAAAATTAA CTTCTGGCAG
CGTATCTATA TGGCGCCCAC CCAGGAGAGG GAAGCTTGAC GCGCTACATA GCTACTGCGT
TCCAGGACAA TGTCAGAAAG TAAGCTCTAT GTCTTGTATC ATAGATATTA TTGGGTACTC
ATGTCATGGA TTAGTGTCAT TCTTGACGGA GAGATGATGG TTTGGGATCC TGTAGTGGAA
CGTTACCTGG CTTTTGGGAC CCTCAAGTCA GCTGCACTTG GTGAGTTATC CGTTTGGAAA
CCTTAAGATT TGTCGTTGAT TTTCGAAAGA CCATTTCAAT GATGAAACCG CCCCTCGTCC
ATGTTGTAAG CCCTCAGTAC CTTTTCCTTT ATCACTCTTT GACTAAGCTT TTTCATTAGT
CAAGGTGTTT GACATCCTTT TCTTGAACGA TCATTGCCTT TCCCGCAAAC GTTTATCAGA
ACGCAAGCGT CTCCTTCGCT CTGGAAAAAT CTTCAAGAAT ATTGAGAACT ATAAGGGGAG
ATTGGAATTT GTAGACGAGA AAAGAGGGAA GAACGCAAAG GATATTAGAG AGTATTTGGA
AAGAGTGGTC GAGACCAAGT AAGTCAATCG ATCTCGGCTT AATATGATCC GGGAGTAAAG
CTAACCATGA ATTGTTAGAG GCGAAGGTTT AGTGGTTAAG AAGACGGATG TGATTTATCA
GACGAACTCG AGAGGATATG ACTGGATCAA GGTCAAGCCC GAGTATAGTG ACCAAATGGG
TGAGGTATGT CAAGATACTA CTTTTATTTG AAGCAACGAC TGATATCGTT TGTATAGAAT
TTAGAAGTCT TGGTGTTGGG CGGATGGTGG GGTAAAGGAG GACGTTCAGG GAAGATTTCA
AGATTACTCT GCGGGTTAAG AGAACAGGCG TTTGACGATG GTACAGTGGA AAGACCAAGG
TAACGATTAT TAATCTATCT GCCTGTTAAG GAAGTTGGGG TTGACTGATG ATGAAACAGC
TTCAAGACTT TCTGTTCAAT CGGTTCTGGA ATGAGCTACT CGGACTACGA GTGGATTTTG
TAAGTCACCT CATGCACTTG CGTTCAATGA GGTGCTCACC TACTCACCTA TCACAATGCA
GGAATAAACA CAAGAAGCAT TGGAGACCTT TTGATAGGTC CAACCCACCC CCTTTCATGA
AGCTTGGGCC AGTGGGTCTC GATGACAAGC GTGAGTTGAT CCAAACGCTC TGATATGATG
AGCTAAATGA GATTTAGCGG ATGTTTATAT CGAGCCGGAA AAGTATGTTA CTCTGGACAG
AAATTCAAAA TGTAAATAGT TGCTGATAGC TGTATAGCTC TTTCGTCATC GAAGTAAAGG
CGTCTGAAAT CGTGCCGGCA GGTCGGTCGC TGTCCAAAGG CTCTTTTCGA TGTTTTGTTC
TAACGATACG CGCAGGAGGC TATGGAATAG GATTTACTCT TCGTTTTCCA CGCTGTAAAT
ACATTTACTA CGACAAGAAT AGTCGAGACT ATGCGCTCGA TGATGAGTCG AAAGAGAGGG
ATATGTGGAC TAGTGTAAGT CTATTTGGCC CCGAAAGTCA GATTTAATGC TGATCAAATT
GGCGAAAAGA TGTCTGTGGA CGGTAGGTCA AGGATTTTTT TATAAGACTA GGAAACTCAT
AAAACGGACA GACTTCATGG ACCTCTTCTC AAGGCCCAAG AGGTCGTATG ACGATAGTCA
AGGTCCTGGG TGAGTGCCAT TGTCTTCTGT TGACGGGATC AGAAGGTTAA CAGTGCAGCA
GGAAAAGGAA GAAGCGCAAG GTGATCAGGT CTAAAGTAAG TTCCCATGTA GATCTCCGCT
GTGTAAGGAA ATCAACTGAA GTGACATGCA GAAAAACCAC CTCATCAGCA ACTTCCGAGG
TCAGAAGCTT TCAGATGCAG ATGTGGAAAC GAGCATATTC AGCGATATGA CGTTTTGTTA
GTCGCGCAAA CCTTGGTTAT CTTGTCTTTC ACTGACGTAT GAGTATAAGT TATTGTGAAG
GGCACATCCG ACTACCCTAA AGCTGATCTC GAAGCACTTG TGCATAAGCA TGGTGCAGAT
TTCACGCAAG CGCAGCTGTC CGACCTATCG GCGATTGTTA TCTCTCCCGA TCAAAAGAGT
CAGTATTGTA TAATTGATTG GGGATCGTGT GAGTAGATGT GCTGACTCAT TGATAGACCC
TTTAGTACGA GCCCAGATCA GACACGGAGT CAATGTCATC AAACCTGAGT GGGTATTTGA
GAGTATTGCG CGGAGGACAG CATTGCCTTT CTTAAAGGAG TAAGCCCTTT CTTTACACGC
AGCATGTCTT TTCTTCAAGT GCTAAATCAT TTGCCAGATT CCTGGTCTTC GCATCGGAAG
AAGCTCAAGA TGGGCGATAT TACAATAAGA CACTTGAGCA ATACGATAAG GTTTCTTTTG
TGCGCGATCG TACCGGCGGG GCACTCGTCG ATGAAGATGG TGATGCCGAT GTCGAAGATG
AGATCATGGA TGGTGAGGAC AAAGATGAGA TTGACGTGGA AGAAAGTCGA GAATCCAAGA
ACCGAAGGAT GGCCAGAGAA GATCTCAAAG AGAAAGAATC GAATAGAACG CTGGAGCAGA
AGAAGCTTCA GGAAGCATGG GGTTTGAGAT CACGAGCGAG TCCAGGAGAT TCCGATAGTG
AACCTGAAGA GGAGATGTCG CTGAAGGAGG AGAGTGACAC GGATTCGGAA AGAAGTAGGG
GGCTCCGGGT ACGTCGCCGT AACCGCATGA TATGTTGATT ATTGCTGAAA TTCATCTCGT
AGGCGATTTA TGAAGATGAA GAGGACGGAG AAAACGACAG TCATGAATCA GATGTTGGGG
TAAACGGAGA TGATTACAGA GCGGTTCCCC TCAGCGGGTT GAATGACAAG GAGGTGGGTC
GTTGCTGACT GACATTTTAC TACAAAGTGC TGATCAAATC GACAGGAAGG ACTTATGGGA
GAGAGTCCAG AAGCAATGCA CTATGATGAA GATCGAGTAC GTTCTTCACC GTGTACGGCA
GATGTATGAA TGTATACTGA TGGTGCGGAA GATTTTCTAT CACCTTGCAT TTTACATCGA
TACTGCAAAG AACGCTGCGG TTAACGGCTT GGAAAGCTCG TCTCCCTCTT TCGACACCCA
AGAAAGGTTA GTCCTCCATT CTCTCATGGG GGCATCGAGC TGATCAGTTT CTCAGACTCG
TCAAAGTCGA GAAGCTGCTG ATAGAGAATG GTGGACGTGT GGCGAGAAGC ATCTCCGATC
CCAAGCTCAC GCACATTATA ATGGATGATG AGGATTCGAG AAGATACGTC GAGTTGACGA
GGAAGACTGC CATGTGAGTT GGTCCTGTCA TGTATGTTGT GGCTCTAACC GAACTATTTG
ATAGGCCCAA AAGGAAACAC ATTGTGACCC CCAAATGGGT GGAGGATTGC GTGGATGAAG
AGACATTGCT GGACGAAGAT CGTGCGTTAT TTGTCTTTCG CGCCATCATG CTGTCCACTG
ACTATTGTTG CAGTGTACAA GCCCAAGTAA
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| Protein sequence | MAVHAPYNHA PPPTQEINGQ KPTLAPAITL ERPADCINRG QYPAFYIICG YLNRLRADAP
HKKYELLTRI FGNWREKVGP DLYPLIRLLL PDKDRERPVY NLKESMLARC YIDILSLEKH
SEAAQRLIKW KQPAGNSPNP TGDFAKVCYN EIKARSTVEE GQLSVEAVNM LLDKLAVGKM
KQKDYVPILK AINMQCTAEE QEWIIRIILK DLHISIRERG VLSAFHPDAI DLYNVCSDLK
RVCWTLYDPG FRLNKNETHL ELFHSFLPQL CGRMNDASLE NIAKAIGAPK EFIMEEKLDG
ERIQLHMRGN GAQWFYCSRK AKDYTYLYGA HPGEGSLTRY IATAFQDNVR NVILDGEMMV
WDPVVERYLA FGTLKSAALA FSLVKVFDIL FLNDHCLSRK RLSERKRLLR SGKIFKNIEN
YKGRLEFVDE KRGKNAKDIR EYLERVVETK GEGLVVKKTD VIYQTNSRGY DWIKVKPEYS
DQMGENLEVL VLGGWWGKGG RSGKISRLLC GLREQAFDDG TLQDFLFNRF WNELLGLRVD
FVSHLMHLRS MRCSPTHLSQ CRNKHKKHWR PFDRSNPPPF MKLGPVGLDD KPDVYIEPEN
SFVIEVKASE IVPAGYGIGF TLRFPRCKYI YYDKNSRDYA LDDECLWTVG QGFFYKTRKL
IKRTDFMDLF SRPKRSYDDS QGPGNFRGQK LSDADVETSI FSDMTFSDLE ALVHKHGADF
TQAQLSDLSA IVISPDQKNP LVRAQIRHGV NVIKPEWVFE SIARRTALPF LKEFLVFASE
EAQDGRYYNK TLEQYDKVSF VRDRTGGALV DEDGDADVED EIMDGEDKDE IDVEESRESK
NRRMAREDLK EKESNRTLEQ KKLQEAWGLR SRASPGDSDS EPEEEMSLKE ESDTDSERSR
GLRAIYEDEE DGENDSHESD VGVNGDDYRA VPLSGLNDKE EGLMGESPEA MHYDEDRIFY
HLAFYIDTAK NAAVNGLESS SPSFDTQERL VKVEKLLIEN GGRVARSISD PKLTHIIMDD
EDSRRYVELT RKTAMPKRKH IVTPKWVEDC VDEETLLDED LYKPK
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