Gene CNK00790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNK00790 
Symbol 
ID3254421 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006680 
Strand
Start bp252276 
End bp253481 
Gene Length1206 bp 
Protein Length346 aa 
Translation table 
GC content49% 
IMG OID638253569 
Productconserved hypothetical protein 
Protein accessionXP_567642 
Protein GI58260464 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AACACACGCT TGTCATCTCT CATCACCAAA ACAATAATGT CTACTACCAT TACAATCGAC 
CTTTTAATCA TTGGAGGCGG CCCAGCAGGT CTATCAGCTG CCATCACATT CTCAAGACTT
CGTCGTTCTT GTTTTATATA CGACTCTGGT GACTACCGTA ACGCCCCAGC TTCTCATTCG
CATACTATTC TCGGCTTTGA AGGGCAGGAT CCTGTTGACT ACAGAGCGAA AGTCAGAAGC
GAGCTGGTAA GAGACTATAA CGCCACGACT ACATTTAGGA AAGGCCAAAT CATCTCCTTG
GTCAAAGATG GCGAATATTT TGAGGCGAAA GACGCAGAGG GAAACACTTT GAAGGCGAGG
AAGGTGATTT TGGCAACTGG ACTCAAGGAC CATCTTCCTG ACATTGCTGG TAAGCAGCCT
ACTCTACAAT TATTATGTAC CAGTACTCAT GTATGTATCT GACCCTGGAC AGGTGTATCC
GAGCAATGGG GCAAACGAAT CATCCACTGT ATCTTTTGTC ACGGTACAGA GACTGCTAAC
CAGCCTTTTG CTTTCCTCTT TACCCCCAAC AATGCCAAGA TGAACCCTTT CTTGGTCGCC
GGTATGCTCA AGTTATGGGG TGCCATGAAT CACCAACCAA TATACATCTT GACGCATGGG
TCCGATGTCA GTACTGAGGA AGGCAGGCGT GAGGCGGGTC TTGAGACTTA TTGGAAAATC
ATCCAAAACA AGGGGTAAGT CCTATTCCTA TATGCTATGG ATTTTGTCTA CGCAGGCCTT
TGTTACTGAC AATGGTCCAG ATACCAAGTG ATCTCCTCTC CAATTCAATC AATCAAAGAG
GACGATTCAA AGTCATCTCT CATCATCAAA TTTGCCGATC ATCCCTCCAT CAGCGTCCCA
TACATGCTCC TTTTCCCAGA AAAGTTTACG CCATCCGACC ATGGCGCACC TATCGTCAAC
GAAAAGCTCC TAGGTGGCCC TCTTGGCCCA ATGGGTACTA TTCCTGCGCC TACCGAGTCC
TCAGGAGCTC CCAAGATGCC TCCTCGTATG GGCGATGACC CAAGGACGCC TGTTGACGGC
TTATTCTGGG CTGGTAACAG TGGGTCCATG CCGGCTAATG TGACGATCAG TGCAGCTCAG
GGATGCGCGG CTGCAATTGT GGCCGCAGAC GAGCTCGGCA CAGAGGATTT GGTCAAGCTC
GCGTAG
 
Protein sequence
MSTTITIDLL IIGGGPAGLS AAITFSRLRR SCFIYDSGDY RNAPASHSHT ILGFEGQDPV 
DYRAKVRSEL VRDYNATTTF RKGQIISLVK DGEYFEAKDA EGNTLKARKV ILATGLKDHL
PDIAGVSEQW GKRIIHCIFC HGTETANQPF AFLFTPNNAK MNPFLVAGML KLWGAMNHQP
IYILTHGSDV STEEGRREAG LETYWKIIQN KGYQVISSPI QSIKEDDSKS SLIIKFADHP
SISVPYMLLF PEKFTPSDHG APIVNEKLLG GPLGPMGTIP APTESSGAPK MPPRMGDDPR
TPVDGLFWAG NSGSMPANVT ISAAQGCAAA IVAADELGTE DLVKLA