Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNJ01300 |
Symbol | |
ID | 3254151 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006679 |
Strand | + |
Start bp | 365236 |
End bp | 367803 |
Gene Length | 2568 bp |
Protein Length | 760 aa |
Translation table | |
GC content | 54% |
IMG OID | 638253287 |
Product | conserved hypothetical protein |
Protein accession | XP_567508 |
Protein GI | 58260196 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00756] pentatricopeptide repeat domain (PPR motif) |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00232907 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCTCTG GACTTGGAGT ACGAGCGGTA AGAAGCTTGG GACAGGCAGC GGGGATATCG AGCGGCCGAC GGCTCTGTCC TGCTTGCTTG GGGTTTAGAC ATATTCAGGC GAGAGAGTAT AGCCATGGTC CGTCTTCAAG ACGGGCGAGG TCATCGGAAT TCGCTCCGAC ACCTCTGAAA CCGACAAAAG CTGCGGTAAG TTCCATTGAA TCTTTGTCAA CGTGAAAAAC CAATCGACCA AAAAACTCAT GCTTCTTTAT ACAATATAGC CAAAAGTCAA AGTAGCCGAC TCTTTGCTTC GCGCCCAATT CCAAACCGTC TTCCACAACC CTACTAAACC TATCGACTCT CACCAAGCGC TCCATGCGGC ATACCCCCTC ATTTTTCGCC GGAATATCCG TCCTCTTCTC GATCCGCATA CCAAGACGAT ACCGCTCCTT GTCGCTCCCA TATTACAACA AGCCGATACG ACAGACGAAG AGAGACGGCA AGCGCTGGTA CTGCTAGGTC ACTGCTATGG GAAAGTAGCG GTAGATTTGC TGTTTATGGG CCCAGAAGTG CAGCATGTGG CTGAACTGTT TGCCTGGGGG TTGATGCTTG AAGTGAATCG GTTCAACGAC GATCGGGAGA AATTACGGGC ATTGCAGGAT ACGCTGGAAG CGGTGTTAAA GCGACTGGCG AATAATGGGG CTACGCCCGT ACTGCAGGCG CCTATCGCTG CAGCCTGGGT GGTGTTGCGA TCCAAGACGG GTACGTCGAC CGTGCCGGAG AACGCATACG TCTGGCCTGC ACAAGCGTCA GTCGAAGAAT ACCTCTCCAA AGTGATTCCT GCGGGAGAGA CAGTCGACTC TTACCAGAGT CAGATCGAGA CGCTTTTGGG GAAATCTGAA GCGATTGCCG ATCGGATACC GAGGTCGAAG GATGCGCTCG ATACCGAACT CGCGAGTATG CGCAATCGAG GCGATTGGTC GGGAATCATC AACCTCTGGG GACGCGTCCA GGCTGGTATG CTGCGTGATG CGGTGCAAAG CCAAGTCGGG ATCCTCGACC CTTTGCCGGA AATACGATTC CCAGTGCTCG CATCGTTTCT CCTTGCGTTT AAACGGCCAT TTATGCGGTC CGCATCTCTA GCGGCTATCG CTAACCCGCC TCCTACGTCT TTCGACACGT ATGCAGCTCA AGTTTTAGCA AAGTGTCCTC GGCCTTTACC GCGTACGATT GCGTATACCC TCATATTCCT CCGGGTTAGA CCGGGTGATA ATGTGGGACT GAGGGCGGGG CATGAGGTCA TGTCGCTCGA TATGGACGAA AGAAGCGACG CGAGTGAGAA TGCGTTGGGA AACTTGAAAG CGACGTGGAA GGAAACGGGG GAGAGGGATT TGAAAATGTA CATGATGTAC ATCGAGGGGT TGGGTAGGCT GGGAGATTTA CATGGGCTGC AGCAAGCGTG GAACGAGTTG GTTGGCGATG AAGAGTGTAA AAAGATTTAT CTTTCTGAAG AACGTTTGCG TGAGTCGCCA TTTGCCTTGT TTCTGGAAAA CCAACTGAAA AAAAAAAAAA ACGTGGAACA GCATCCAAAG CCCCCTTTCC GCCCATCCAT GCACTTAATC AGATGATTTC CGCCTGCCTA CTCATCCCCA ACGATGGCCC CCCCCTCGCG CTCGACCTCT TTTCCCAAGC GTCCCGCCCT GACTCGGCCA TCCGATGTAA CCTTATCACC ATCAACACCG TTCTTCGCCA CTATGCCCGT GAAGCCAATA TCGAGGCCAT GTCCGCCCTG TTCAGCAAGG CCGGGGAACT GAAACTCCAG CCGGACGTGG TGACGTACAC GACCTTGGTC CAGGGACTGC TCCGTGCGCG ACGACTCGAT TTGGCAAAAG GTGCGATGGA TGCGATGCAG AAGCAAGGGA TCGTCCCGAA CGAGCGGATG TGTTCGATGC TTATCGCGGA CCTTGCCAAG TCGGGCACGC GTGTGGGGTT GGAACATGCA GAAGAGATGC TCAAGCTTAT GCATCAGAAG AACATGCAGA CGAACGAAGT CACGTGGACG GCGCTGGCTT CGGGGTACTT TAGGGGCGGC TGGGAGGCGG ATGGGTGGGA GGCGCTGGCG AGGATGAACA GGCTTGGGAT CAAGCTGCAT AGGGTGGGGT ATAACATGCT CCTCAAGCAG GCTACGGGGA GTGTGGATTC GAACGGCGGG GAGGACGATG TGGAGACGGT GATGAAGCTC TGGAGGAGGA TGCTCCATGA CGGGGTGGTT CCGAATAGTG ACTCGTATCT CATAGTGTTG ACCAAGTTGC TGCAGATGGA CCGAAGGAAA GAGATTGAAG AGATTATGCG GGAGATGCGC CAGAGAGGAT TCCGGCCTGA AAAGGGGGCG TTGGTCAGGG TAGTGGAGAG TATTAGTAGA CGACGATGAG TGCATGTGGA TGGTACAATT CTGCAGGGCT TTACATCGTT GACATTACGC GCTATGAGAG GCCGAAGAAT GTGCGGCCGA GACCGATTTG TTGATATCTT TCGTACGCTG CACGGCTAGT TAGCTCGATC ATGCACTGCT GGCGGCGT
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Protein sequence | MASGLGVRAV RSLGQAAGIS SGRRLCPACL GFRHIQAREY SHGPSSRRAR SSEFAPTPLK PTKAAPKVKV ADSLLRAQFQ TVFHNPTKPI DSHQALHAAY PLIFRRNIRP LLDPHTKTIP LLVAPILQQA DTTDEERRQA LVLLGHCYGK VAVDLLFMGP EVQHVAELFA WGLMLEVNRF NDDREKLRAL QDTLEAVLKR LANNGATPVL QAPIAAAWVV LRSKTGTSTV PENAYVWPAQ ASVEEYLSKV IPAGETVDSY QSQIETLLGK SEAIADRIPR SKDALDTELA SMRNRGDWSG IINLWGRVQA GMLRDAVQSQ VGILDPLPEI RFPVLASFLL AFKRPFMRSA SLAAIANPPP TSFDTYAAQV LAKCPRPLPR TIAYTLIFLR VRPGDNVGLR AGHEVMSLDM DERSDASENA LGNLKATWKE TGERDLKMYM MYIEGLGRLG DLHGLQQAWN ELVGDEECKK IYLSEERLPS KAPFPPIHAL NQMISACLLI PNDGPPLALD LFSQASRPDS AIRCNLITIN TVLRHYAREA NIEAMSALFS KAGELKLQPD VVTYTTLVQG LLRARRLDLA KGAMDAMQKQ GIVPNERMCS MLIADLAKSG TRVGLEHAEE MLKLMHQKNM QTNEVTWTAL ASGYFRGGWE ADGWEALARM NRLGIKLHRV GYNMLLKQAT GSVDSNGGED DVETVMKLWR RMLHDGVVPN SDSYLIVLTK LLQMDRRKEI EEIMREMRQR GFRPEKGALV RVVESISRRR
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