| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNJ00200 |
|---|
| Symbol | |
|---|
| ID | 3254174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006679 |
|---|
| Strand | - |
|---|
| Start bp | 46850 |
|---|
| End bp | 49233 |
|---|
| Gene Length | 2384 bp |
|---|
| Protein Length | 573 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | 638253177 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_567277 |
|---|
| Protein GI | 58259729 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0125915 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | AAACACTTTC TCCGCAAAAA TATGGGACAC AACTCGGACA AGCTATACGT GACGCACTCG
GAACATGCGG CGGGGAGCCA CACTGCTTCA AGTTTTGGGA AAAGACAAGA GACGGGCAAA
TCAGAGTTTC AGCGATTACC GTTGTAAGTG TTATTTGTCC TCGTCCCTCG TTTCGGGTTG
CGGTTTCTCG ATAGCTTATG TGTGTGTGTG TGTGTGTGTG TGGTGTGCAG TGACTGCTGT
GCGTTATCTC TACAGCCGTT CAAGAATCCA GTCGCTGTTA TATCGGAAAC GAAAGCAGGA
GAAGCGCCGA GAGCAGATGT CTTTGACCTT TTGAACATTG TTCCTTATAT CAGAAAATTC
AAGTCTAGTG AGTTGGGCCG AATCGCTCCG TGTTGGCTCT TTTAACTGAT GAGGGATAAC
CCCCCCAAGA CCCGGTAACT GGTAAACCTC TGGAAACGAG CCAGTTGATC AAACTCAACT
TTTCCCGAGT GGGTGTGGCT CCAAAAAGAA AGAAAAAAAG GATGTTGTGG CTGATGTAAA
AAGTGCAGAA TGCGGAAGGC AACCTCCATG ACCCGATCAC TTATAAAGTC TTCTCCCCCC
ACATCCACAT TGTCTTTCTC AAAAACACTG TACGTTTTCT TATACTTGTC CGAACACCCA
CTCATTACTT GTTATATAGG GCAATGTATT TGACATGGCA TCCCTTCAGC TGCTCGCTAT
CAAGCCCAAG ACATGGCGAG ATCTGGTAAA CGACGAGCCG TTTAAGCGGA AGGATATCAT
CACGATCCAG GATCCGGAGA ACCTTGCTGC AAGGGATTTG AGAGAGTATG ATTATGTGAA
GAAGGATTTA AAGGTGTCGG GTATGTTGGT TCTTGCCCAG ATTGATGGTG GGGGCTGATT
GATGATAAGA GGACGAGCTG GCTGGGGATC CGTTGAGAGG AATCAATGTG GATGCAGCAG
GGGGAGCTAG CAAGGTGTTA AAGATGATTG CTGAAAAAGT AGGTTTTCGG TTTCGTCTGT
AGAAAATGTA GCGTTTATTG AAAAACGCCC AGAACAAATC TGGACAATCG CCAGCACCGA
CACCATCGAA AATAGACGAT GGAAAGGGGC AGGAAAAGAA GGAGGGCGTT GTTGCGAAGC
GCAAGGTTGA GCAGATGGCT TGTGAGTCTA ACCCTAAATC TTTGTTGAGA TGTACTAACA
TGGAATATGT ATCGCAGACA ATGCATCCAA CTATAGTTCT GGCCGAGCTG CTGCTTCGCT
GACTAGTACT TCATTGATGC CTGAAACGAA GAGTGAACGC GCCATGTTTG ATGAAGAAGA
ATGCAAGTGT CTTTTTTTAT TTCTAACTAC CTGGCTGATT GAAATATCAG ACATGTTTGA
AGAACTGTCC CGCCCGACGA AAGATAAAGA GCGACAGAAA TCCAAAGCGT ACGCGACGAT
AACGACCAAC TTTGGGCCGC TGAATGTCGA ACTTCATGGG GACCGTGCGC CAAAGACGGT
GTATAATTTT GTGCAGCTTG CGAAAGCGGG CAAGTATGAT AACGTCGTGT TCCATCGATT
GATACCTGGT TTCATGGTCC GTGTTTCTTG TCGTTTGTCC GTTTGGTTCT TCCGCTGATA
GGGGAACAGG TCCAAGGGGG CGATCCAACC GGTACGGGGC GAGGGGGAGA GTCATATTGG
GGTGAACCGT TTAGAGACGA GCATGGTGAA AAGGGGGCGT ACAAACACGA TTCCCGTGGT
GTGCTGGCAA GTCCGAGTGT CAGTCGTGGG GTAAGCTAAC AGCGCAACCG CCTGCAGTCA
ATGGCAAACT CTGGGCCGCG CACGAATGGC TCTCAGTTCT TTTTCACTTT CCGCCCGACG
CCGCATTTGG ACGGTAAGCA TACGGTGTTT GGCAAGCTTG TGGGCGGGGA AGAGACGTTG
GACAAGATTG AGCGGGTGAA TGTGCGGCCG GGCGGGGATC GGCCGGTGAG GGATATCGTT
ATTCAGGGTG TTACCGTGTA CGTCCCGGGT TCTTTCCTGA AGCAGCGAGC TGACGCGGGG
GATAGCCTGC AAGACCCGTT TGAAGCGTAC CAAGCGCGGC TGCAAGCGCG TCTGGCGCGA
CAAGACCAAT CGGACGCGGC GCTGAAACGG CGGGCGGAGG CGCAGAAGGA GAGGGAGAAG
GACAGGACGA CGTGGCTGGG TACGAAGCTG GGAGAGAAGG GCGCGGTGGG GAAGAGGAGG
ATGGAGGAGG ATGTGGGGGT GGGGAAGTAT CTGAAGGTGG GGGGAGAAGC TGGACAGAGG
ACGACATTGG ACGTGGTGGA CTATGGGGTG GAGAAGAAGA AGAAGAAGGC GGGGGGGTTT
GGCGATTTCT CGGGGTGGTA GGAGGCGCCG GTTAATTGTC GGGT
|
|---|
| Protein sequence | MGHNSDKLYV THSEHAAGSH TASSFGKRQE TGKSEFQRLP FDCCALSLQP FKNPVAVISE
TKAGEAPRAD VFDLLNIVPY IRKFKSNPVT GKPLETSQLI KLNFSRNAEG NLHDPITYKV
FSPHIHIVFL KNTGNVFDMA SLQLLAIKPK TWRDLVNDEP FKRKDIITIQ DPENLAARDL
REYDYVKKDL KVSEDELAGD PLRGINVDAA GGASKVLKMI AEKNKSGQSP APTPSKIDDG
KGQEKKEGVV AKRKVEQMAY NASNYSSGRA AASLTSTSLM PETKSERAMF DEEEYMFEEL
SRPTKDKERQ KSKAYATITT NFGPLNVELH GDRAPKTVYN FVQLAKAGKY DNVVFHRLIP
GFMVQGGDPT GTGRGGESYW GEPFRDEHGE KGAYKHDSRG VLSMANSGPR TNGSQFFFTF
RPTPHLDGKH TVFGKLVGGE ETLDKIERVN VRPGGDRPVR DIVIQGVTVL QDPFEAYQAR
LQARLARQDQ SDAALKRRAE AQKEREKDRT TWLGTKLGEK GAVGKRRMEE DVGVGKYLKV
GGEAGQRTTL DVVDYGVEKK KKKAGGFGDF SGW
|
|---|
| |