Gene CNJ00140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNJ00140 
Symbol 
ID3254290 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006679 
Strand
Start bp31864 
End bp35016 
Gene Length3153 bp 
Protein Length635 aa 
Translation table 
GC content48% 
IMG OID638253171 
Productfumarate reductase (NADH), putative 
Protein accessionXP_567271 
Protein GI58259717 
COG category[C] Energy production and conversion
[I] Lipid transport and metabolism 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
[COG5274] Cytochrome b involved in lipid metabolism 
TIGRFAM ID[TIGR01813] flavocytochrome c 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0434389 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TATATCCCAG TACTTTTCTC ACTCCTTGAC TATCAATACC ACCACAAGAT CATAATGTCC 
AAAGTGAAGG TCATCATCGT AGGCGGCGGC CTTTCAGGTC TTTCCGCTGC CCATACAGTC
CTCGAGCGAG GAGGGAATGT CGTAAGTATT ACGCTTTGTT GAGCTGTGTC GTGGGAAGAA
AACACGGGTA ACTGATACGG ATTCCTTCTC CGTGTGAATG ATAATAGTTA CTGCTCGATA
AGAACAGTTT CATGGGCGGA AACTCGACCA AAGCTACGAG TGGTATTAAC GGTGCCAATA
CCCAGGTGAG TTCTCTTTGT TTGAGTATGC AGTGGCGGTA GTAAGGGGGT TCGCTGACCG
ATGTTTTTGA CTGATGTAGG CTCAACAAGT GAGGACCTTC TCGCAGATAC TGCTTTGTCT
ATCTGCTAAT ATCACATCTA CTTATAAAGA CACTCGGTAT CCCCGACACC TCTGCAAAGT
TGTATGTCCT GTCATCCCCT TTGTTCACCA TGTCGCTATT CTTCCCGCTG ACGGTGTATC
TCAGTTTCGC AGACACCAAG AAATCCGCTC GAGAGCTCGC TAGAGACGAC CTCATCCGTG
TGCTCACCTA TAAATCCGGC GATGCAGTCA ATTGGCTCAT CGAGCGGTTC AACCTTGATC
TAAGTAAGGT TTCCCGACTT GGGGGTCATT CAGAGAAGAG GACGCATAGA GGTACACAGC
AGTTCCCCGG AATGACGATT ACTTATGCTT TGATGGAAAA GGTAAACCTT TTTGTTTTGT
GTGTCATAGG TTTGGGTGCT GATGGTGGCC TTGCGCTAGC TCGAGGATAT GGCAGCACAA
CACCCTGATA GAGTCAAGAT TCTCAAGAAA GCCAAGGTCA CCAAGCTCTT GCAAGAGGAT
GGTAAAGTTA TTGGGGTCGA TTACGAGCGG GATGGTAAAC ATGTGATTCT TTCGAGTTTA
GATCAATCAA CAGCGCTAAC GGGTCTTACA GTACACTGAA TACGGCCCCG TCGTACTTGC
AACAGGAGGG TACGCAGCGG ATTTCACGGC AGACTCGTTA CTCCAGCAGT ATCGACCAGA
ATATTACAAC CTTGTACGTT TCCTGTTTCT CACCTTTACC TTTTACTTGT TGGAGGAGGC
TTCACTGACG CCTCCATCCC TCCCTATTGT ACAGCCAACA ACAAACGGCG ACCACTGCAC
CGGCGACGGC CACAAAATGG CCATGCTCAT CGGTGCCAAA GGCATCGACC TCGAGAAAGT
CCAAGTTCAC CCGACCGGGC TCGTGGACCC GAAAGACCCT GATGCAAAAG TGAAGTTCCT
TGCTGCGGAA GCACTGAGAG GCGTGGGAGG CTTGTTGATC AATAGAGACG GGGAGAGATT
TGTAGATGAG TTGGAGCATA GAGATTATGT GACGGGGAAG ATGTGGGAGA ATGACAAGGT
GAGTTTTTCT CTTCTTCTCC TCAATATTAG CATTTTGACC TATGAACCTA ACCTTGATAC
CAATAGTTCC CAGTCCGCCT TGTGCTGAAC AGCACGTCAA GCAAAGAGAT TGAATGGCAC
TGCAAACACT ACGTCGGGAG GGGACTTATG AAAAAGTTCA ACAGCGGAGA AGAGTTGGCA
AAAGAGATTG GGTGTAGTCC CGAGGCTTTG AAGAAGACTT GTAAGTTGAT GGTCTGATAC
TATCAAATGG GCAACAGGAC TGATGATTGC AGTCGACGAT CATAATAGAT ACGCCAAGAA
CCCGGGTACT GATCCATTTG GCAAAAAGGT TCGTCCATCT ATTCTTTCTC TTGACATAGC
TAACCCTTCC TCAACTAGTT CTTCTCTGGC GGCGACTTTT CCATGTCGGA CACTTACCAC
GCCGCTATCA TGACCCCCGT ATTGCACTAC ACCATGGGCG GTCTCGAAAT CGGTATCAAC
GCCGCCGTCC ACAATGCTAA TGGTGGAGAG GTGGAAGGCC TCTACGCTTG TGGCGAACTT
GCAGGCGGTG TCCATGGAGC AAACCGGTTG GGTGGGAGTA GTCTTCTGTA TGTTTCTTTT
TACTTTCTTC CCTTAATCAG GCCTTCGACT AATATACCTT GACATGATAT CAGGGGTTGC
GTCGTGTTTG GTCGTGTAGC AGGCGATTCC GTCTCTTCGT ACCTCCTTTC CTCTCTCGCC
AACACTGATG CGAATGTGAA AGCGGCCAAG CGACTCGGTA CGATCAACAA CCATCTCGTT
GAGACCAAGA TTAAGCTAGA CCCAGAGTCA AAGGCTTTGC AGCTATCCTT CTCTTGGGGA
GATGAGACCG GCGACCAGAA TCAGAAGGAT GCTGGTGGTG CCCAAGTCCC AGCGAGTAGC
GCTCCGGGTC AAAAAGGGGA CCGCACAGCC GCAGAAATCG AACCCGAGGC CCTTCCGACC
CCACCCGCTA AAAAAGGTTC TGACAAGGGC GATAAGAAGG AGTATACCCT TGAAGAGGTT
GCGAAGCACA ATACTGAGAA GGATTGCTGG GTGGTGATCG GTGGTCAAGT CTTGGATGTT
ACCAAGTAAG TTTTTCTTCC AACTCCTTCA CCTAATGCGT CCGTCGGACA ATCAGCTGAT
TGTTATCATG TCTCCTCTCT TTTATCCTTG TTCTCTTACC AAACTTAGTT TCTTGGAAGA
TCACCGTAAG TCCCATCTCG AACGTCTTAG GTACATCAGA AACTGGAGCT GATTTCAATT
CCTTTTCTAA TAGCTGGCGG TGTGAAAGCA ATCATGCTCT ACGCAGGCAG GGATGCTACT
GAGTGCGTTT TCTCCGTTTC ACATTTCACA GAGACTTAAT GTTGATGTGA TTGATTTGAT
TAGGGAGTTT GATATGATCC ACCCCCCTAA TGCGATTGCG AAGTATGCGC CCGATACTGG
TAGGTTCAAA ATCCTCTAAA CCTACCTTTG ACGCAGTTCG AGTTCATGAC TGACGTGAAT
GTATGTAGTT ATCGGAACCA TCAAGTCGTA AGACTACTCG AACAATTGAC GGGCGGATCA
TATTGCGTGC GGTTGTAATC TATTAACAGA GGTGAAAGGA AGTGACGAAA GCGCGGAAGA
GAAGGAAGCG CGGCCGTGTG ATGATGCGAA GAAAAGAAGA TACGATTCTG TTGTGTTGTG
CGCACGTATA AGTATTTCTA TGTAGCATGC AGA
 
Protein sequence
MSKVKVIIVG GGLSGLSAAH TVLERGGNVL LLDKNSFMGG NSTKATSGIN GANTQAQQTL 
GIPDTSAKFF ADTKKSAREL ARDDLIRVLT YKSGDAVNWL IERFNLDLSK VSRLGGHSEK
RTHRGTQQFP GMTITYALME KLEDMAAQHP DRVKILKKAK VTKLLQEDGK VIGVDYERDG
KHYTEYGPVV LATGGYAADF TADSLLQQYR PEYYNLPTTN GDHCTGDGHK MAMLIGAKGI
DLEKVQVHPT GLVDPKDPDA KVKFLAAEAL RGVGGLLINR DGERFVDELE HRDYVTGKMW
ENDKFPVRLV LNSTSSKEIE WHCKHYVGRG LMKKFNSGEE LAKEIGCSPE ALKKTFDDHN
RYAKNPGTDP FGKKFFSGGD FSMSDTYHAA IMTPVLHYTM GGLEIGINAA VHNANGGEVE
GLYACGELAG GVHGANRLGG SSLLGCVVFG RVAGDSVSSY LLSSLANTDA NVKAAKRLGT
INNHLVETKI KLDPESKALQ LSFSWGDETG DQNQKDAGGA QVPASSAPGQ KGDRTAAEIE
PEALPTPPAK KGSDKGDKKE YTLEEVAKHN TEKDCWVVIG GQVLDVTNFL EDHPGGVKAI
MLYAGRDATE EFDMIHPPNA IAKYAPDTVI GTIKS