Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNJ00140 |
Symbol | |
ID | 3254290 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006679 |
Strand | - |
Start bp | 31864 |
End bp | 35016 |
Gene Length | 3153 bp |
Protein Length | 635 aa |
Translation table | |
GC content | 48% |
IMG OID | 638253171 |
Product | fumarate reductase (NADH), putative |
Protein accession | XP_567271 |
Protein GI | 58259717 |
COG category | [C] Energy production and conversion [I] Lipid transport and metabolism |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [COG5274] Cytochrome b involved in lipid metabolism |
TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0434389 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TATATCCCAG TACTTTTCTC ACTCCTTGAC TATCAATACC ACCACAAGAT CATAATGTCC AAAGTGAAGG TCATCATCGT AGGCGGCGGC CTTTCAGGTC TTTCCGCTGC CCATACAGTC CTCGAGCGAG GAGGGAATGT CGTAAGTATT ACGCTTTGTT GAGCTGTGTC GTGGGAAGAA AACACGGGTA ACTGATACGG ATTCCTTCTC CGTGTGAATG ATAATAGTTA CTGCTCGATA AGAACAGTTT CATGGGCGGA AACTCGACCA AAGCTACGAG TGGTATTAAC GGTGCCAATA CCCAGGTGAG TTCTCTTTGT TTGAGTATGC AGTGGCGGTA GTAAGGGGGT TCGCTGACCG ATGTTTTTGA CTGATGTAGG CTCAACAAGT GAGGACCTTC TCGCAGATAC TGCTTTGTCT ATCTGCTAAT ATCACATCTA CTTATAAAGA CACTCGGTAT CCCCGACACC TCTGCAAAGT TGTATGTCCT GTCATCCCCT TTGTTCACCA TGTCGCTATT CTTCCCGCTG ACGGTGTATC TCAGTTTCGC AGACACCAAG AAATCCGCTC GAGAGCTCGC TAGAGACGAC CTCATCCGTG TGCTCACCTA TAAATCCGGC GATGCAGTCA ATTGGCTCAT CGAGCGGTTC AACCTTGATC TAAGTAAGGT TTCCCGACTT GGGGGTCATT CAGAGAAGAG GACGCATAGA GGTACACAGC AGTTCCCCGG AATGACGATT ACTTATGCTT TGATGGAAAA GGTAAACCTT TTTGTTTTGT GTGTCATAGG TTTGGGTGCT GATGGTGGCC TTGCGCTAGC TCGAGGATAT GGCAGCACAA CACCCTGATA GAGTCAAGAT TCTCAAGAAA GCCAAGGTCA CCAAGCTCTT GCAAGAGGAT GGTAAAGTTA TTGGGGTCGA TTACGAGCGG GATGGTAAAC ATGTGATTCT TTCGAGTTTA GATCAATCAA CAGCGCTAAC GGGTCTTACA GTACACTGAA TACGGCCCCG TCGTACTTGC AACAGGAGGG TACGCAGCGG ATTTCACGGC AGACTCGTTA CTCCAGCAGT ATCGACCAGA ATATTACAAC CTTGTACGTT TCCTGTTTCT CACCTTTACC TTTTACTTGT TGGAGGAGGC TTCACTGACG CCTCCATCCC TCCCTATTGT ACAGCCAACA ACAAACGGCG ACCACTGCAC CGGCGACGGC CACAAAATGG CCATGCTCAT CGGTGCCAAA GGCATCGACC TCGAGAAAGT CCAAGTTCAC CCGACCGGGC TCGTGGACCC GAAAGACCCT GATGCAAAAG TGAAGTTCCT TGCTGCGGAA GCACTGAGAG GCGTGGGAGG CTTGTTGATC AATAGAGACG GGGAGAGATT TGTAGATGAG TTGGAGCATA GAGATTATGT GACGGGGAAG ATGTGGGAGA ATGACAAGGT GAGTTTTTCT CTTCTTCTCC TCAATATTAG CATTTTGACC TATGAACCTA ACCTTGATAC CAATAGTTCC CAGTCCGCCT TGTGCTGAAC AGCACGTCAA GCAAAGAGAT TGAATGGCAC TGCAAACACT ACGTCGGGAG GGGACTTATG AAAAAGTTCA ACAGCGGAGA AGAGTTGGCA AAAGAGATTG GGTGTAGTCC CGAGGCTTTG AAGAAGACTT GTAAGTTGAT GGTCTGATAC TATCAAATGG GCAACAGGAC TGATGATTGC AGTCGACGAT CATAATAGAT ACGCCAAGAA CCCGGGTACT GATCCATTTG GCAAAAAGGT TCGTCCATCT ATTCTTTCTC TTGACATAGC TAACCCTTCC TCAACTAGTT CTTCTCTGGC GGCGACTTTT CCATGTCGGA CACTTACCAC GCCGCTATCA TGACCCCCGT ATTGCACTAC ACCATGGGCG GTCTCGAAAT CGGTATCAAC GCCGCCGTCC ACAATGCTAA TGGTGGAGAG GTGGAAGGCC TCTACGCTTG TGGCGAACTT GCAGGCGGTG TCCATGGAGC AAACCGGTTG GGTGGGAGTA GTCTTCTGTA TGTTTCTTTT TACTTTCTTC CCTTAATCAG GCCTTCGACT AATATACCTT GACATGATAT CAGGGGTTGC GTCGTGTTTG GTCGTGTAGC AGGCGATTCC GTCTCTTCGT ACCTCCTTTC CTCTCTCGCC AACACTGATG CGAATGTGAA AGCGGCCAAG CGACTCGGTA CGATCAACAA CCATCTCGTT GAGACCAAGA TTAAGCTAGA CCCAGAGTCA AAGGCTTTGC AGCTATCCTT CTCTTGGGGA GATGAGACCG GCGACCAGAA TCAGAAGGAT GCTGGTGGTG CCCAAGTCCC AGCGAGTAGC GCTCCGGGTC AAAAAGGGGA CCGCACAGCC GCAGAAATCG AACCCGAGGC CCTTCCGACC CCACCCGCTA AAAAAGGTTC TGACAAGGGC GATAAGAAGG AGTATACCCT TGAAGAGGTT GCGAAGCACA ATACTGAGAA GGATTGCTGG GTGGTGATCG GTGGTCAAGT CTTGGATGTT ACCAAGTAAG TTTTTCTTCC AACTCCTTCA CCTAATGCGT CCGTCGGACA ATCAGCTGAT TGTTATCATG TCTCCTCTCT TTTATCCTTG TTCTCTTACC AAACTTAGTT TCTTGGAAGA TCACCGTAAG TCCCATCTCG AACGTCTTAG GTACATCAGA AACTGGAGCT GATTTCAATT CCTTTTCTAA TAGCTGGCGG TGTGAAAGCA ATCATGCTCT ACGCAGGCAG GGATGCTACT GAGTGCGTTT TCTCCGTTTC ACATTTCACA GAGACTTAAT GTTGATGTGA TTGATTTGAT TAGGGAGTTT GATATGATCC ACCCCCCTAA TGCGATTGCG AAGTATGCGC CCGATACTGG TAGGTTCAAA ATCCTCTAAA CCTACCTTTG ACGCAGTTCG AGTTCATGAC TGACGTGAAT GTATGTAGTT ATCGGAACCA TCAAGTCGTA AGACTACTCG AACAATTGAC GGGCGGATCA TATTGCGTGC GGTTGTAATC TATTAACAGA GGTGAAAGGA AGTGACGAAA GCGCGGAAGA GAAGGAAGCG CGGCCGTGTG ATGATGCGAA GAAAAGAAGA TACGATTCTG TTGTGTTGTG CGCACGTATA AGTATTTCTA TGTAGCATGC AGA
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Protein sequence | MSKVKVIIVG GGLSGLSAAH TVLERGGNVL LLDKNSFMGG NSTKATSGIN GANTQAQQTL GIPDTSAKFF ADTKKSAREL ARDDLIRVLT YKSGDAVNWL IERFNLDLSK VSRLGGHSEK RTHRGTQQFP GMTITYALME KLEDMAAQHP DRVKILKKAK VTKLLQEDGK VIGVDYERDG KHYTEYGPVV LATGGYAADF TADSLLQQYR PEYYNLPTTN GDHCTGDGHK MAMLIGAKGI DLEKVQVHPT GLVDPKDPDA KVKFLAAEAL RGVGGLLINR DGERFVDELE HRDYVTGKMW ENDKFPVRLV LNSTSSKEIE WHCKHYVGRG LMKKFNSGEE LAKEIGCSPE ALKKTFDDHN RYAKNPGTDP FGKKFFSGGD FSMSDTYHAA IMTPVLHYTM GGLEIGINAA VHNANGGEVE GLYACGELAG GVHGANRLGG SSLLGCVVFG RVAGDSVSSY LLSSLANTDA NVKAAKRLGT INNHLVETKI KLDPESKALQ LSFSWGDETG DQNQKDAGGA QVPASSAPGQ KGDRTAAEIE PEALPTPPAK KGSDKGDKKE YTLEEVAKHN TEKDCWVVIG GQVLDVTNFL EDHPGGVKAI MLYAGRDATE EFDMIHPPNA IAKYAPDTVI GTIKS
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