Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNA08160 |
Symbol | |
ID | 3253780 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006670 |
Strand | - |
Start bp | 2245055 |
End bp | 2246256 |
Gene Length | 1202 bp |
Protein Length | 311 aa |
Translation table | |
GC content | 48% |
IMG OID | 638253138 |
Product | mitochondrion protein, putative |
Protein accession | XP_567195 |
Protein GI | 58259565 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.00756175 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CAAACTGACG TGCTTCCCTC TCCGCTCGTT CAGATAATGC TCCCCTGTAT AACTACTCTG ATTCGACCTG CTTTTTCTCC TATACACAAC ATCAGAGCCA TGTCCTCCTT CTCTCGACTT GTTCGATTCG TCCCCAAATC CTCCTCCACA CCGCTTATTG GTGAACCGGT CAACGCCGAC CTCGACATCG GTCTCGCCGC GTACGAGTCA AAACCTATCG AAATTGAGGT GTTCTCTGGT ACTTCTGTCC TCAACCCCGG AGAGAAGACT GGCAAAAAGG AAATTGTCGA GAGGCTTTTG AGCCCATTAG CCCAGTCTGA AGTCGGCACG ATACGATGTA TCGGTCTGAA TGTGAGTTCT TTTCAAGAGA ATTTCGAATG TTTTTGGATG TTGTGAGGCT AATCGTCGGT GGTTGTTTCT AGTACGTTAA CCACGCTAAG GAGGTCAATC TTCCCATGCC CGATATCCCC ACCCTTTTTA TGAAGCCTTC TACATCTCTC GCCGATCCCT TTCCTTCCCC TACCATTATC CCCAAGGCTT TTGTCGCTTC CAACTCTGCT GATTTCGAGT CGGAAGTCGC ATTCGTGATT GGCAAGGATG CCAAGAACGT TTCCGAAGAG GAGGCTCTTG ACTACGTCCT TGGGTGAGCC CATGCAATTT TTAAAAAATG ATAGCTTCCT GGCTGACTCT GCAAAGTTTT ACCGCCGCCA ACGACGTTTC CTCCCGAGAA GCTCAGTTCG CCCAGTCTCA ATGGTGTTAT TCCAAGTCTT TCGACGGCGC TTGCCCTATT GGTCCGGCCC TCGTCAACAA GAACCAAGCC AACAAGTTCT CCGATGTCAA GATTGAGGGC TCTCTTAACG GGAAGACAGT CCAATCTAGC CGCCTCGAGT GAGTAGATTG TTCGTGATTG TATTCTGGCG GAACTAACTT GTATGTATAG TGACTTGATC TTTTCTGTTC CCAAGATTGT TTCTTTCCTT TCCCAAGGTA CCACTCTTCC TGCTGGTACG ATCATCATCA CTGGGTAGGT CCCCATTTTT GTCACCGTTA ATACCGTTAT CTGACGCGTT TGTGATAGTA CCCCTGCCGG TGTCGGATGG TCATCTACTC CACGAATCAC TCTCAAGGAT GGCGACGAGT TCCGAGTATT TGTTTCCCAT GGTGTTGGTA CCTTGATTAA CAAGATTGTT GAGGAAAAAT AG
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Protein sequence | MLPCITTLIR PAFSPIHNIR AMSSFSRLVR FVPKSSSTPL IGEPVNADLD IGLAAYESKP IEIEVFSGTS VLNPGEKTGK KEIVERLLSP LAQSEVGTIR CIGLNYVNHA KEVNLPMPDI PTLFMKPSTS LADPFPSPTI IPKAFVASNS ADFESEVAFV IGKDAKNVSE EEALDYVLGF TAANDVSSRE AQFAQSQWCY SKSFDGACPI GPALVNKNQA NKFSDVKIEG SLNGKTVQSS RLDDLIFSVP KIVSFLSQGT TLPAGTIIIT GTPAGVGWSS TPRITLKDGD EFRVFVSHGV GTLINKIVEE K
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