Gene CNA08160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA08160 
Symbol 
ID3253780 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand
Start bp2245055 
End bp2246256 
Gene Length1202 bp 
Protein Length311 aa 
Translation table 
GC content48% 
IMG OID638253138 
Productmitochondrion protein, putative 
Protein accessionXP_567195 
Protein GI58259565 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00756175 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAAACTGACG TGCTTCCCTC TCCGCTCGTT CAGATAATGC TCCCCTGTAT AACTACTCTG 
ATTCGACCTG CTTTTTCTCC TATACACAAC ATCAGAGCCA TGTCCTCCTT CTCTCGACTT
GTTCGATTCG TCCCCAAATC CTCCTCCACA CCGCTTATTG GTGAACCGGT CAACGCCGAC
CTCGACATCG GTCTCGCCGC GTACGAGTCA AAACCTATCG AAATTGAGGT GTTCTCTGGT
ACTTCTGTCC TCAACCCCGG AGAGAAGACT GGCAAAAAGG AAATTGTCGA GAGGCTTTTG
AGCCCATTAG CCCAGTCTGA AGTCGGCACG ATACGATGTA TCGGTCTGAA TGTGAGTTCT
TTTCAAGAGA ATTTCGAATG TTTTTGGATG TTGTGAGGCT AATCGTCGGT GGTTGTTTCT
AGTACGTTAA CCACGCTAAG GAGGTCAATC TTCCCATGCC CGATATCCCC ACCCTTTTTA
TGAAGCCTTC TACATCTCTC GCCGATCCCT TTCCTTCCCC TACCATTATC CCCAAGGCTT
TTGTCGCTTC CAACTCTGCT GATTTCGAGT CGGAAGTCGC ATTCGTGATT GGCAAGGATG
CCAAGAACGT TTCCGAAGAG GAGGCTCTTG ACTACGTCCT TGGGTGAGCC CATGCAATTT
TTAAAAAATG ATAGCTTCCT GGCTGACTCT GCAAAGTTTT ACCGCCGCCA ACGACGTTTC
CTCCCGAGAA GCTCAGTTCG CCCAGTCTCA ATGGTGTTAT TCCAAGTCTT TCGACGGCGC
TTGCCCTATT GGTCCGGCCC TCGTCAACAA GAACCAAGCC AACAAGTTCT CCGATGTCAA
GATTGAGGGC TCTCTTAACG GGAAGACAGT CCAATCTAGC CGCCTCGAGT GAGTAGATTG
TTCGTGATTG TATTCTGGCG GAACTAACTT GTATGTATAG TGACTTGATC TTTTCTGTTC
CCAAGATTGT TTCTTTCCTT TCCCAAGGTA CCACTCTTCC TGCTGGTACG ATCATCATCA
CTGGGTAGGT CCCCATTTTT GTCACCGTTA ATACCGTTAT CTGACGCGTT TGTGATAGTA
CCCCTGCCGG TGTCGGATGG TCATCTACTC CACGAATCAC TCTCAAGGAT GGCGACGAGT
TCCGAGTATT TGTTTCCCAT GGTGTTGGTA CCTTGATTAA CAAGATTGTT GAGGAAAAAT
AG
 
Protein sequence
MLPCITTLIR PAFSPIHNIR AMSSFSRLVR FVPKSSSTPL IGEPVNADLD IGLAAYESKP 
IEIEVFSGTS VLNPGEKTGK KEIVERLLSP LAQSEVGTIR CIGLNYVNHA KEVNLPMPDI
PTLFMKPSTS LADPFPSPTI IPKAFVASNS ADFESEVAFV IGKDAKNVSE EEALDYVLGF
TAANDVSSRE AQFAQSQWCY SKSFDGACPI GPALVNKNQA NKFSDVKIEG SLNGKTVQSS
RLDDLIFSVP KIVSFLSQGT TLPAGTIIIT GTPAGVGWSS TPRITLKDGD EFRVFVSHGV
GTLINKIVEE K