| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA08110 |
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| Symbol | |
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| ID | 3253875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006670 |
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| Strand | - |
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| Start bp | 2231989 |
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| End bp | 2233226 |
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| Gene Length | 1238 bp |
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| Protein Length | 348 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 638253133 |
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| Product | D-hydroxyacid dehydrogenase, putative |
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| Protein accession | XP_567190 |
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| Protein GI | 58259555 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00184163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATCGCATCCA CTGCCACCCT GGATTTCACC AGAAACCACG GAAACATTCA ACATCATGAA
GCTGGCCGTT TTCAGTGCCA AATCCTACGA CAAGAACTTT CTTGACTCTG CTCGAGAAAA
ACATTACGCA TCTCTTTGCG AAATCACCTA CCACACTTTC CCACTGTGCT TAGAAACTGT
TCCTCTAGCA CAAGGAAGCG ATGCGGTTTG CGTCTTCGTC AACGACGACC TCAGTGCCGA
AGTACTACGC TCCCTTCATG CCGTCGGTAC CCGCGCGATC CTCCTCCGCT GCGCTGGCTA
CAACAATGTC GACCTCTTAG TAGCTGAAGA ACTCGGTTTC TTCGTCGCCA ATGTGCAATC
TTACTCACCA GAAGCTGTTG CTGAGTTTGC TGTAGCGTTA ATCCAAACTT TGAACCGTAA
AACGCATCGG GCCTACAACC GTGTACGAGA AGGAAACTTC AATCTCGAAG GTTTCTTAGG
CCATACGCTA TATGGGAAGA CGGTGGGAAT AATAGGTGTG GGAAGGATTG GCATGGCGCT
GGCTCGTATC ATGAAAGGAT TCGGGTGTCG ACTACTTGCC TTTGACCCTT TCGGTAGTGA
AGAATTCAAC AAGCTCGGTG ACTTTGTCGA CCTCGAAACT CTCTTGGGGC AGAGCGATAT
CGTCAGTCTG CACTGTCCTT TGACTGAAGG GACGAGGCAT ATCATGAATG ACCAAACCCT
TTCTCGAATG AAGAAAGGGG TCCTGCTCGT CAACACTTCC CGAGGGGGAT TGATCAACAC
CAGAGCGGCC ATCCGTGCTC TCAAAACGGG CCAGCTTGGC GGTTTGGCCC TAGATGTGTA
CGAAGAAGAA GGATCACTGT TTTACAACGA TCATTCGGCC GAAATCATCC AAGATGATAC
CTTGATGAGG TTGATGACGT TTCATAATGT CCTGGTCTGT GGCCATCAAG CGTTCTTCAC
CAAGGAGGCA TTGGACGAGA TTGCTCGGAT GACATTGAGT AATTTGAAGG ACTTCGTGGA
GAAAAAAGAG TGCAAGAATT CGTTGGTTCG AGAAGGCCAT CTGTATGTCG CGAAAGGCAA
GGAACCAGTG AGAAACTTAT AAAGGTGTGT AATCTTTATT GATGGTAAGA TTTTGCTGAT
GTTATCACAC CCGACTTCGC AAACGTTTGA AGACGGAAAC TGTCGGAAGG TCCAGCTCTT
GTATATAATA TTGAATGAAC GCCTGATATA TATGCCCT
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| Protein sequence | MKLAVFSAKS YDKNFLDSAR EKHYASLCEI TYHTFPLCLE TVPLAQGSDA VCVFVNDDLS
AEVLRSLHAV GTRAILLRCA GYNNVDLLVA EELGFFVANV QSYSPEAVAE FAVALIQTLN
RKTHRAYNRV REGNFNLEGF LGHTLYGKTV GIIGVGRIGM ALARIMKGFG CRLLAFDPFG
SEEFNKLGDF VDLETLLGQS DIVSLHCPLT EGTRHIMNDQ TLSRMKKGVL LVNTSRGGLI
NTRAAIRALK TGQLGGLALD VYEEEGSLFY NDHSAEIIQD DTLMRLMTFH NVLVCGHQAF
FTKEALDEIA RMTLSNLKDF VEKKECKNSL VREGHLYVAK GKEPVRNL
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