Gene CNA06310 details

Gene Information

• Locus tag: CNA06310
• ID: 3253986
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006670
• Strand: -
• Start bp: 1713380
• End bp: 1717070
• Gene Length: 3691 bp
• Protein Length: 867 aa
• GC content: 47%
• IMG OID: 638252952
• Product: ATP-binding cassette (ABC) transporter, putative
• Protein accession: XP_566978
• Protein GI: 58259131
• COG category: [R] General function prediction only
• COG ID: [COG4178] ABC-type uncharacterized transport system, permease and ATPase components

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GCCGCTGTTC GATACTACGT ACGCTCTTCG TTTCGTTTCA TGCGTGTGGA GAACGAAGTC 
TATGGGCCGT AGCGCATAGC AAGCAATAAC TTACCATCCT CTCTATTGCT GCAATCGACC 
GAATTGACCG AGCTTCGATA TCACTCAATA CCATTTGTTT AACCCGTTAC CTTGGGAAAT 
CCGAAACAGC AATGTCATCT GTCCTGCCCA CGTCTCTGAC GAGGGGCCCA TTCGTCCCAC 
CTTCCAAATC TCGCCAGATG GTTATCCTCA GCATCATTTT AGCCGCCTTG TTATCCCGCT 
CAACTGTCGT CAGCACACCC CGCTTGGCCG TCCAAGAATG GTATTCTGAA CGAGTCAGAG 
TCAGAAACGA CCGGAAAAGA AGAGAAGCTG AAACGCCTCT GTAAGCTTCA TTGGCCTTGA 
GGCTCTGAAA TTCCATTAAC TCTCCTCATG TTCAGCAATA CGCCTGCTCT GGAGAAGAAG 
CTGGTTGACC TCTATATCCG TGATCCCTCG TCAGACTCTC GAACACTGCT GGTCCCGCAT 
ATGGGAAAAA TTTCCAAGGT CCGAATCACA CCCACTTCCT CCGAGCTATA TAAGGAGCAT 
CTTTCTCTGT TTCCTCGGAT GACAGGTTCC GAAAAGCTGG GGGTGAACAA GGAATTTTGG 
AGGATGCTAA AGGCCGTACT CAAAGTCACA TTTCCTAGGT ATGGTTTACG AGCGCAGTTG 
ATGAGTACGT CCTGACAAAT GAACAGTAAG AGGGGAAAAG AAGTGTTTCT ACTGTTGCTC 
CATTCCTTCT TCTTAGTTTC AAGGACAGTA TTGAGTGTAA TGGTCGCTAG ACTGGACGGG 
AAAATCGTCC GTGACCTGGT CAGTGGTTCA AGGACCAAGG ATAAACAAGT AACGGGAGAT 
CGGCTAAATG TGGTTGTAGG TGTCAGCTAA TGCTGTCGGG TTTTTAAGGG GGTTAGGATG 
GTGGTTTATC CTTGCTGTGC CCAGCACCTA TACCAACGCC ATGGTAAGAT TTCCCAGGAC 
CTTGAGTCAG AAGCTCGTGG CAGTGATGAT ATACTAACAC CCCTTGAGAT CCGATACCTT 
GAGAGAAAAC TCGCGCTAGC ATTCCGGACC AATTTGACCC GTTACATCCA TGATCTCTAT 
CTGTATGCTC TTGTCTTGGC ATCTGCCCTT TCGTTTTACT CTGAAAGATG ATAATCTGAT 
GAAGCTTTCA CAGCAATGAC AACCTTAACT ATTACAAATT CGGCTCAGGG GTGGGTGGAC 
AGGTGGCTAT GGGGGAAGGG AGAGAAAAGA AGCATGGAGG ATTCGGCGGC TCGAGTGAAG 
CTGCCGCTGG AACGGCCGAC CAGTAAGCTT AACTTCCGAA AGAACGAGAA AAAAAAGCTG 
ATATGATATC AAGGTTCATC ACCACTGATG TGGCACGATT CTGTGACTCT TTAGCTGCTC 
TCTAGTGAGT CGACTATTCT CAGACCATCT AGCTGACAAA TCAATAGTGG TAACATGGGT 
AAACCAGCTT TGGACCTCTT GATATTTACT TCTCAGCTCT CTTCTTCGCT GGGACCTCTT 
GGGACAATCG GCCTCTTTGC CAATTATGGG CTCACAGCTT ACATCCTTCG AAAGGCAACC 
CCTGCCTTTG GTCGAATGGC CGCGACTACC GCCCGCCTGG AGGGTAATTA TCGGGCTGGC 
CTGTCAAGAG TGGGTCGAGA TGCCGAGGAA GTTGCATTCT ACAATGGTGG CAAGAGGGAA 
AGGGGTATTT TGGAAGGGAT GTACAGGAAG CTAAAAGAAC ATGTCCAAGC AGTTCATAAA 
GCTAGAATCC CGTATGGGTA AGTCTCAATA TATCATGTGC ACGTTTGGGC AGATCTTTAC 
TTGTAATATA CAGGATGATA GAAGACTTTG TCATCAAATA TCTGTGGTCA GCCGCTGGAT 
ACGGCCTTAT GTCTATACCG ATTTTCTTCC CTGTTGCCAC AACGGCCCTC GGACCTACGA 
ATCATAGAGT GAACCACGAG ATTGCCGAAC GCACGGAGGG TAAGTTGAAC TTCAACGGCA 
ACAACGCATT AGTATTGACA AAAGAAAGGT TATGTGTCTA ACCGACGCTT GTTGCTATCC 
CTCGCCGACG CCGGAGGAAG GTTGATGTAC TCTGGCAAAG ACTTGGCAGA ACTTTCTGGG 
TATACGAGTC GTGTATATTC TCTAATTTCT GCTCTACATA GCTTGGATAA TGGCATTTAT 
CCCGAACACC CCCGCCCGAG TTCATTATCA CCAAACGATG TGAGCTTCTT TTTTTATATA 
GCGGATATTA GGCGCAAACT GACGAGATGA CTTTAGACAT TCTATGATAT GGCGAACATT 
CAGGGCCAAG TATCTATCGG CCCCAACCAT CTGTTACTAA GGGGTGTGCC CATTGTTGCT 
CCACCGGAAG GTTCAGGGGC TGAAAGAGGA GGGGAAGAGC TGATCAAGAG CTTGGATTTG 
AGGGTAGAGA AAGGTGATCA TACACTCATC ACGGGGCCCA AGTAAGTTTT CCTTCCATCC 
TTCAATACCG ACAGTGAAAT ACCGACAGTG AGGCTGATGG TGAAATAGTG GTGTAGGAAA 
GACATCTGTG GCCAGGATCA TAGCGCAACT CTGGCCAGTG TGGAAAGGCC TTTTAGAAAG 
ACCCAGACAC GGTGAAGGAG GTATATTCTT CCTGCCTCAG CGTCCTTACC TGTCAATTGG 
AAGCCTTCGA GATCAGGTCA TCTAGTAAGC AACTATATGC TTTATATCTA GTCGTTTGTG 
GAGACGAGGC TGATATGACC AGTCCACATA CCTATGCGGA GATGAAATCT CGCGGAAGGA 
CAGATACAGA ATTGATGATG ATCCTTGAAG CTGTTCACCT GGAGTATCTT CCGGGGCGAG 
AGGGCGGTTG GGAAACAAGG AAAGAATGGA AGGACGTCCT GTCGTGAGTT TTATCATCTC 
TCAAAAAGAG TCACCATTGG CTAACTAACT GTGCATCAGA GGAGGTGAAA AGCAGCGTGT 
GAGCAAATCC TGTTTCCGTC CTATTTTGAT AGCACATACT GACTCTCGAG TGTTATATAG 
ATGGGCATGG CGCGTCTTTT CTATCACCGA CCGCAATTTG CTGTTTTGGA TGAATGCACT 
TCAGCTGTAT CCAGCGATGT TGAAGGACTC ATGTACGAAC ATGCAAAGGC TCTAGGTATA 
ACTCTTGTAA CTATCTCGTA AGTACAGGAA AAAAAGAAAT AGTCGTCTGC CGAGATTGTT 
TTAGTTTTTG CAAACTGACG GGATGGGGCG CAAGGCATCG GCCGTCGTTA TTGAAATATC 
ACAACCGCCA TTTGCGTCTC GGGGATCCAT CTCAACCTGT CCCAAGCGCA CCGTCCCGTG 
CGCAATCGAC ATACTCTCTC ACAGCTTTCC AAACCCCTTC ACAATCTGAT GCTCCTCATC 
AAAAGATGCC TGCAACGCCT CTCGCATCTC AAGGCTGGCA ACTGACCACC CTTTCTTCAA 
GTAGTGCGGA GGAAAAGTTG GAGCTGGATA AAGAAATTGA GGCGTTGGAG ATGACGTTGA 
ATGAAGAAGT CGAAAAATGG GAAAAGAGAT TGCGAGAAAT CACCAAAGAG TTGAAATCTG 
GCGAACATGT AGATAGGAGA CAAGTATGAG GCTTCTCATT TGTGTCATCA TCATTCGTTG 
TAGATACGTG TATATTACAG ATCATGCAAG T 

 

Protein sequence

MSSVLPTSLT RGPFVPPSKS RQMVILSIIL AALLSRSTVV STPRLAVQEW YSERVRVRND 
RKRREAETPL NTPALEKKLV DLYIRDPSSD SRTLLVPHMG KISKVRITPT SSELYKEHLS 
LFPRMTGSEK LGVNKEFWRM LKAVLKVTFP SKRGKEVFLL LLHSFFLVSR TVLSVMVARL 
DGKIVRDLVS ANAVGFLRGL GWWFILAVPS TYTNAMSEAR GSDDILTPLE IRYLERKLAL 
AFRTNLTRYI HDLYLNDNLN YYKFGSGVGG QVAMGEGREK KHGGFGGSSE AAAGTADQFI 
TTDVARFCDS LAALYGNMGK PALDLLIFTS QLSSSLGPLG TIGLFANYGL TAYILRKATP 
AFGRMAATTA RLEGNYRAGL SRVGRDAEEV AFYNGGKRER GILEGMYRKL KEHVQAVHKA 
RIPYGMIEDF VIKYLWSAAG YGLMSIPIFF PVATTALGPT NHRVNHEIAE RTEGYVSNRR 
LLLSLADAGG RLMYSGKDLA ELSGYTSRVY SLISALHSLD NGIYPEHPRP SSLSPNDTFY 
DMANIQGQVS IGPNHLLLRG VPIVAPPEGS GAERGGEELI KSLDLRVEKG DHTLITGPNG 
VGKTSVARII AQLWPVWKGL LERPRHGEGG IFFLPQRPYL SIGSLRDQVI YPHTYAEMKS 
RGRTDTELMM ILEAVHLEYL PGREGGWETR KEWKDVLSGG EKQRMGMARL FYHRPQFAVL 
DECTSAVSSD VEGLMYEHAK ALGITLVTIS HRPSLLKYHN RHLRLGDPSQ PVPSAPSRAQ 
STYSLTAFQT PSQSDAPHQK MPATPLASQG WQLTTLSSSS AEEKLELDKE IEALEMTLNE 
EVEKWEKRLR EITKELKSGE HVDRRQV