Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNA06000 |
Symbol | |
ID | 3253832 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006670 |
Strand | - |
Start bp | 1601011 |
End bp | 1608493 |
Gene Length | 7483 bp |
Protein Length | 2333 aa |
Translation table | |
GC content | 52% |
IMG OID | 638252921 |
Product | aspartate carbamoyltransferase, putative |
Protein accession | XP_566954 |
Protein GI | 58259083 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) [COG0505] Carbamoylphosphate synthase small subunit [COG0540] Aspartate carbamoyltransferase, catalytic chain |
TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase [TIGR01368] carbamoyl-phosphate synthase, small subunit [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00636164 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCATCC CCACCCCTCC TGCGTTCCAG GGTGTCGTTC CTCCCAGCGA CATCCCAGCC ACCCAACAGG CTTCCAGCTT GGCTCCTGCT GCTCACAGCG CTGTGGCGCC CGAAGCTGAC ACTCCCACCA TGGAGCGCAC TCCTTCCTCT GCCCCCGTAC CTAGGCCCGC GGGCAGCCTT TACCCCCCTG CTACTCTCAA GGGTATTGAC TACCAAGGTA TGCCTGACGA GCCCAAATGG GACGACTCGA TGGGCGAGCC TGATGCCGTC CTTGAGCTTG CTGATGGCCT CGCTCTCGCT GGTCACTCTT TCGGTGCCAA AAAGTCTGTT GCCGGAGAAT GCGTCTTCCA GACCGGTACG TATACCGTTC CAGCTAAAAT GACCATGCAA AATTTATTGA CCCCGTCCAG GTATGGTCGG TTATCCCGAG TCTCTCACCG ATCCTTCATA CTCTTCTCAG ATCCTTATCC TCACCTACCC CCTGGTCGGT AACTATGGTG TTCCTGAGAG ACCCGACGTG GAGACCTCTC ACGTCCCCAC TTCCGAGGAT GCTCACAATG TTCCTCCCGC TTCTAGCCTT CTTGACTCCT TGCCTCTTGA GTTTGAGTCT TCCCACATTC ACGTTGCGGC CCTTGTGGTT GCCAACTATC ACCCTAGCTT CTCGCACCAC TTGGCCACTT CTTCCTTGGG CAAGTGGCTC GAAGAGCAAG GCATCCCCGC CATTTGGGGT GTCGACACTA GGATGCTCAC CAAGCGTCTC CGAGAAGGTG GTGTCCTCCT CGGTCGAGTT CTCAACAAGC GAGCAGGTGT CCTCGATGGC GAGCGAGGTA GGGATGGCCA GTCTGGCGTC CTTGGCGGCG TTCAGCGTCT CATTAACGGC CTTTCTCCTT CGACCTCTAT GGCTCAAACC CAGTCCATTG ACAAGTTCAA TGTCAGCTGG CGAGAGGACT TTGAGACCAT CCCTTATTAC GATCCCAACC ACGAGAATCT TGTAGCCAAG GTGTCTACCA AGGCTCCTGT TGTCTACACC GCTAGCACCA GCTCCGACAA GAAAATACAC CCTCAGACAG GTAGGCAGAT GAGGGTTGTG GCCATTGATG TCGGTATGAA GTGGAACCAA ATCAGGTGTT TCAGGGAGCG TGGTATCGAA GTTAAGGTTG TCCCTTGGGT GAGCTATTTC CACATCGCTC TTCATCCTAC ATGTTCGGCT AATCTATCGA TAGAATTATG ATATCAACAA CGAATCTGAG CCTTACGATG GTCTCTTTGT TTCTAACGGT CCTGGTGACC CTTCCATGGT CAAGGAGACT ATCAGCAACC TTTCTCAAGC CCTCGAGACT TCCAAGGTCC CTATCTTTGG TATTTGTCTT GGTCACCAAC TTCTCGCCCT TGCTTCCGGT GCCAAGACCC GCAAGATGAA GTACGGTAAT CGTGGTATGA ACATTCCTTG TACCTGCGCT ACATCTGGTC GATGCTACAT CACCTCTCAG AACCACGGTT ACGAAGTCGA CGTAACCACC CTCAAGAACG GCTGGGAACC TTTGTTCACC AATGCCAACG ACGGCTCTAA CGAGGGTATC TGGTGCGGTA AGAACGGTAA ACCCTTCTTC TCCGTTCAGT TCCACCCCGA GTCTGCTCCT GGTCCTCGAG ACACTGAGTT CCTTTTCGAT GTCTTCATCC AAAGCATCGT TGACACTGCT CGAGAGGGCA GATTGATCTC CATTGATGTT CCCGGTGGTG AGCTTGCGAC CAACATCGCT GCCAAGCCCC GAGAGCAGGT CAAGAAGGTT CTTGTCCTTG GTTCCGGTGG TCTTTCCATT GGACAGGCCG GTGAATTCGA CTACTCCGGT TCCCAAGCCA TCAAGGCTTT GAAGGAGGAA GGTATCTACA CCATCCTCGT CAACCCCAAT ATTGCCACTA TCCAAACCTC CAAGGGTCTC GCGGACAAGG TTTACTTCCT TCCCGTCACC CCCGAATTTG TGCTCAAAAT CATCAAGCAC GAGAAGCCCG ATGGTATCTA CTGTACTTTC GGTGGTCAGA CCGCCTTGAA TGTCGGTATC AAGCTCAAGG ACGAGTTTAG CAAACTCGGT GTCAAGGTAC TCGGTACCCC CATTGAGACC ATCATCACCA CCGAAGACCG AGAAATGTTT GCCCGTGCTA TGGAGGAGAT TGGCGAGAAG TGTGCCGAGT CTGCTACCGC GGTCAACTTG ACAGAGGCTA TCGAAGCTGC CAATCGAATT GGTTTCCCCG TCATTGTTCG AGCTGCCTAT GCTCTCGGTG GTTTGGGTTC TGGTTTCGCC AAGGATGTGG AGCAATTGAC AGAGCTGTGT GGCAAGGCCT TTGCTACTAG TCCTCAAGTT TTGGTTGAGA AGAGTATGAA GGGTTGGAAG GAGATTGAGT ATGAAGTTGT TAGGGACTGC AGGAACAATT GTATCACCGT GTGTAACATG GAGGTGAGTG TTGTCCACAT AGGAGACTTT ACCCGAAACT CATAGAATTT ACAGAACTTT GATCCTCTTG GTATTCACAC TGGTGACTCG ATCGTCGTCG CCCCCTCCCA AACTCTCTCT GATGCGGACT ACAACATGCT TCGAACTACC GCTGTCAACG TTATCCGACA CCTCGGTGTC GTTGGAGAGT GTAACATCCA GTATGCGCTC AACCCGTACT CCAAGGAGTA CTGCATCATT GAAGTCAACG CCCGTCTCTC CCGTTCGTCC GCTTTGGCTT CCAAAGCTAC CGGTTACCCT CTTGCCTTCA TTGCTGCCAA GTTGGGTTTG AACATTCCTT TGAACGAGAT CCGAAACTCG GTGACCAAGT TAACTTCAGC GTGCTTTGAG CCTTCTCTTG ACTACTGTGT CGTCAAGATT CCTCGATGGG ATCTCAAGAA GTTCAACCGC GTGAGCACCG CGTTGAGCTC CTCCATGAAG TCTGTTGGTG AAGTCATGGC CATCGGCCGT ACTTTCGAAG AGACCATCCA AAAGGCTATC AGGTGTATCG ACGACCAGCT CCCTGGTTTC GGTGACCACG CCAAGGTTGA GGATCTCGAC TATGAGATTG CCAACCCTAC CGACAAGAGG TTGTTCGCCA TCGCAGCGGC ATTGAAGAAG GGCTACTCTG TTGAGAAGTT GAACGAGATG AGCTCTATCG ATCCCTGGTT CTTGACCAGG TTGCAGAGGT TGATTAAGAC GGAGCAGGTT ATCTCGTAAG TTGAATCATT CACCAGTTTA TTCTCATAGC TAACTCTTTT TGTAGTCAAT ACAACGCTTC CAACGTTCCT TCCGCCCTCG TTCTTAACGC TAAGCAGCTT GGTTTTGCTG ACAGGCAGAT CGCCAAGATG CTCAGCTCCA ACGAGCTTGC TGTTCGTCGT CTCCGTATTG AGGCCGGTAT CACTCCTTTT GTCAAGCAGA TTGACACTGT CGCCGCTGAG TTCCCCGCGT TCACCAACTA CCTCTACACT ACTTACAACG CCACTGAGCA TGATGTTGAC TTCGAAGACA ACGGTGTTAT GGTCCTCGGT TCTGGTGTCT ACCGAATCGG TTCTTCTGTT GAATTCGATT GGTGTGCTGT GAGGGCCATC AGAACATTGA GGGAGAATGG CATGAAGACA GTCATGATCA ACTACAATCC TGAAACTGTG TCTACCGATT ACGACGAGGC AGACAAGTTG TACTTTGAGA ACATCTCTCT TGAGACCGTT CTTGACATCT ATGACACTGA GCACTCTAGC GGTGTCGTTT TGTCCATGGG TGGTCAGACC CCTAACAACA TTGCGCTCGC GCTTCATCGA CAGAACGTCA AGATCTACGG CACTTCCCCC GAGATGATCG ACACTGCCGA GAACCGATAC AAATTCTCTC GAATGCTCGA CAAAATTGGT GTTGACCAAC CCTTGTGGAG GGAGTTGACC TCGTTCCCTG AGGCCAAGGC TTTCTGTGAC AAGGTCGGCT ACCCCGTGCT TGTCCGTCCA TCTTACGTTT TGTCTGGTGC GGCGATGAAT GTCGTTTTCT CTCAAGATGA CCTCAACAAC TACCTTACTC AGGCTACCGA CGTTTCCCGA GACCACCCCG TCGTTATCTC CAAGTACATC GAGGAGGCCA AGGAAATTGA GATGGACGCC GTCGCCAGGG ATGGTAAGAT GGTGATGCAC TACATCTCCG AGCACGTCGA GAACGCTGGT GTTCACTCTG GTGATGCTAC GCTCGTGCTT CCCCCTCAGG ACCTCGATGC CGAGACTGTC CGAAAGATTG AGATTGCCAC ACAAAAGATT GGTCACGCGC TCAACGTTAC CGGTCCTTAC AATATCCAAT TCATTGCCAA GAACAATGAG ATCAAGGTTA TTGAGTGTAA CCTCCGTGCC GCTCGATCCT TCCCCTTCGT CTCCAAGGTC ACCGGTATCG ACGCCATCGA AATTGCCACC AAGGTCATGC TCGGTTTGCC TGTCACCCCC TACCCTGACG TCAAGATGCC CGCCAACTAC GTCGGTGTCA AGGTCCCCCA GTTCTCTTTC AGCCGATTGT CTGGTGCGGA CCCTGTTCTC GGTGTTGAGA TGGCTTCTAC TGGTGAAGTC GCTTGTTTCG GTAAAGACAG ATACGATGCC TACTTGAAGG CTCTTATCTC CACCGGTATC GTCCCTCCCA AGAAGAACAT CCTCTTGTCC ATTGGTTCCT TCAAGGAGAA GCTTGAGATG CTTCCTTCCG TTCACAAGCT CCACCGAATG GGCTACAACT TGTTTGCTAC CGCCGGTACT GCCGATTTCA TTCAAGAACA CGGTATCCCG GTCAAGTACC TCGAACAACT TGGCTCGGAG AACGATCTCA ACCCTCAGAA GAAGGAGTAC TCTTTGAGCC AGCATCTTGC CAACAACTTG ATCGACTTGT ACATTAACTT GCCTTCCAAG AACAGGTTCC GACGACCGGC CAGTTACATC TCCCAGGGTT ACAAGTCTAG ACGAATGGCT GTCGACTTTG CTATTCCTCT GATTACCAAC GTCAAGAATG CCAAGTTGTT CATCGAGGCG ATCATCCGAA AGCCCACATT CGACATCTCC AGCGTCGATT ACCAAACCTC TCACGAGACT TTCACCTTCC CTGGTCTCGT CTCCGTTCAG GCCTTTGTTC CTGGTGCTGC TGAGGAGAGC TCTACCGACT TTGGTGAGGC GACTGAGGCT GCGATTGAGG GTGGATTTAC CATCATGCAG ATGGTGCCTC AGGGTGTCAA CTCTGCTGTC GAAGACGAAA TCTCTCTTCA GCGAGCCCAG GCTAACGCTT CTGGCGCTGC CCACTGCGAC TATTCCTTCT CTGTCGCTGC TACTGCCGAC AATGCCTCTC GTTTGCAGGA TGCCATCGCC GCCGGCGCCA AGGCTCTTTA CATTCCCTTC AACAACTTTT ATGGTGCAAA CAACAAGGTC AGCAGCGTCT CTCAACACTT TGCTGCCTGG CCTGCCGACA GGCCCATCAT CACTGATGCT AGGGCTACTG ATCTTGCTTC CACCTTGTTG TTGGCCAGCT TGAACAACAG GAGCATCCAC ATTACCAGTG TTTCCACCAA GGACGACTTG TTGTTGATCG CGTTAGCTAA GGAGAAGGGT CTCGCCGTTA CTTGCGACGT TTCCATCTAC TCTCTCTTCT ACTGTCAGAC TGACTTCCCC GACGCTGCCA AGGTCCTTCC CTCTAAGGCG GATCAGGAGG CTTTGTGGGA CAACCTTGCC TCCATCGACG TTTTCTCCGT CGGTGTTCTT CCTTACGAGC TCGGCCGAGC CCTCAACAAG CCCGTTTCTG CCCGATCTGG TGTTGCCGAG TCTCTCCCTC TCTTGCTCAC TGCCGTCACC GAGGGAAAGC TTACTCTCGA AGACATCTCT CTTCGACTGA GCGAGAACCC TCGTGCTATC TTCGGCTTGC CCGAGCAGTC CCAGACTTAT GTCGAGATTG AAGTGAACCG ACGATCCTCT TTCACTGCTG AGGATGCCGA GCGTACTTGG TCACCTCTCG ACGGCCAGGC CATCGCTGGT AACGTTCACC GAGTCGTCGC CAACAACCAC TCCATTTTCC TTGATGGCCA AAGCTTCTCG ATGCCCTTCG GCCGGGACAT CTCTGCCTCC GGTTCTCGAC CGACCAAGCA AGCCCGTGGC TCGTTTGCTC TTCAGAAGCG ACCTTCCGTC ACCGCCCTCA TGTCCCCCAT CTCCGAGAAG ACCTCATCTG CCGGTGCCAA GCTCATGTCA CTTGCTTCCG TCGCCCCTAT TCGAGAACTT TCCCCTATTC GTGGCCTCGT GTCTGTCCAG ACCCATCCCA CTTTCTCGCG TCGACACATC CTCTCAGTGA AGCAATTCGA CCGTGAAGAC TTGCACGCGT TGTTCAATGT TGCTTCCGAG ATGCGTACTG CGGTTGAACG ATCCGGCTCT GTTGACACTC TTCGAGGCAG GGTCCTCTGC ACCTTGTTCT ACGAGCCGTC AACGAGGACT AGCACTTCGT TCGAGGCTGC TATGAAGAGG TGTGGTGGTG AAGTTGTCCA GGTCAATGCT TCTACTTCTT CTGTGCAGAA GGGTGAGAGC TTGGCAGACA CCATCAGGAC TGTTGGCTGC TACGCCGATG CCATTGCTTT GCGACATCCC TCTGTGGGTA GCGCCAAGGC TGCGGCCAAG TCCAGCCCTG TGCCCATCTT GAACGCTGGT GACGGTATTG GAGAGCACCC TACTCAGAGT TTGTTGGATG TCTTTTGTAT CCGAGAAGAG TTGGGCTCTG TGAACGGTAT CACGGTCACA CTGAGTAAGT TGCCTGATGC TCTTAACGAT TCTAAAACGC GTGCTGACCA AACGACACTA GTTGGTGATC TCAAGAATGG TCGAACTGTT CACTCGCTTG TCAAGCTTCT CTCCCTTTAC GACGTGACCC TCAACTTTGT CTCCCCTCGT TCTCTTGCCA TGCCCGAGTC TGTCAAGACC GAGGCTTTCC GAGCCGGTAT CCGATTCACC GAGTCTTTCA CTCTCACTGA TGAGATTGTG TCCAGATCTG ACGTCTTGTA CGTTACTCGA GTGCAGAAAG AGCGATTTGA GAACATTGCG GAGTACGAAG CTGTCAAGGA CATTTATGTC ATCAACAATG ATGTGCTGGA GAAGGCCAAG GAGTCGGCGA TTGTAATGCA CCCCTTGCCT AGGGTGAACG AGATTGACCC CGAAGTGGAC TTTGACTCGA AGAGGGCAGC GTACTTTAGG CAGATGCGAT ACGGTCTTTT CGTGAGTTTT ATGGCAACTT TTTTTTTTCT GGTACAATTG CTGATCTCGC AAACAGGTCC GGATGGCTCT TCTTACTCTT GTCATGGGTG CTTAGAGTAT GTAGACTTGG TGGCCCGGCC GGGGTGTCTT GGTGTCAGTG TAGGAGAGTA GCATTGTGGG GATTGGGTGT TGTGATGGAA GGAAAAGATG TGTTTTTTTT AAAAAGTAAC TAGATTCATC TCTCTCTATC TTAGTCATGT ACAAATCAAG AAT
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Protein sequence | MSIPTPPAFQ GVVPPSDIPA TQQASSLAPA AHSAVAPEAD TPTMERTPSS APVPRPAGSL YPPATLKGID YQGMPDEPKW DDSMGEPDAV LELADGLALA GHSFGAKKSV AGECVFQTGM VGYPESLTDP SYSSQILILT YPLVGNYGVP ERPDVETSHV PTSEDAHNVP PASSLLDSLP LEFESSHIHV AALVVANYHP SFSHHLATSS LGKWLEEQGI PAIWGVDTRM LTKRLREGGV LLGRVLNKRA GVLDGERGRD GQSGVLGGVQ RLINGLSPST SMAQTQSIDK FNVSWREDFE TIPYYDPNHE NLVAKVSTKA PVVYTASTSS DKKIHPQTGR QMRVVAIDVG MKWNQIRCFR ERGIEVKVVP WNYDINNESE PYDGLFVSNG PGDPSMVKET ISNLSQALET SKVPIFGICL GHQLLALASG AKTRKMKYGN RGMNIPCTCA TSGRCYITSQ NHGYEVDVTT LKNGWEPLFT NANDGSNEGI WCGKNGKPFF SVQFHPESAP GPRDTEFLFD VFIQSIVDTA REGRLISIDV PGGELATNIA AKPREQVKKV LVLGSGGLSI GQAGEFDYSG SQAIKALKEE GIYTILVNPN IATIQTSKGL ADKVYFLPVT PEFVLKIIKH EKPDGIYCTF GGQTALNVGI KLKDEFSKLG VKVLGTPIET IITTEDREMF ARAMEEIGEK CAESATAVNL TEAIEAANRI GFPVIVRAAY ALGGLGSGFA KDVEQLTELC GKAFATSPQV LVEKSMKGWK EIEYEVVRDC RNNCITVCNM ENFDPLGIHT GDSIVVAPSQ TLSDADYNML RTTAVNVIRH LGVVGECNIQ YALNPYSKEY CIIEVNARLS RSSALASKAT GYPLAFIAAK LGLNIPLNEI RNSVTKLTSA CFEPSLDYCV VKIPRWDLKK FNRVSTALSS SMKSVGEVMA IGRTFEETIQ KAIRCIDDQL PGFGDHAKVE DLDYEIANPT DKRLFAIAAA LKKGYSVEKL NEMSSIDPWF LTRLQRLIKT EQVISQYNAS NVPSALVLNA KQLGFADRQI AKMLSSNELA VRRLRIEAGI TPFVKQIDTV AAEFPAFTNY LYTTYNATEH DVDFEDNGVM VLGSGVYRIG SSVEFDWCAV RAIRTLRENG MKTVMINYNP ETVSTDYDEA DKLYFENISL ETVLDIYDTE HSSGVVLSMG GQTPNNIALA LHRQNVKIYG TSPEMIDTAE NRYKFSRMLD KIGVDQPLWR ELTSFPEAKA FCDKVGYPVL VRPSYVLSGA AMNVVFSQDD LNNYLTQATD VSRDHPVVIS KYIEEAKEIE MDAVARDGKM VMHYISEHVE NAGVHSGDAT LVLPPQDLDA ETVRKIEIAT QKIGHALNVT GPYNIQFIAK NNEIKVIECN LRAARSFPFV SKVTGIDAIE IATKVMLGLP VTPYPDVKMP ANYVGVKVPQ FSFSRLSGAD PVLGVEMAST GEVACFGKDR YDAYLKALIS TGIVPPKKNI LLSIGSFKEK LEMLPSVHKL HRMGYNLFAT AGTADFIQEH GIPVKYLEQL GSENDLNPQK KEYSLSQHLA NNLIDLYINL PSKNRFRRPA SYISQGYKSR RMAVDFAIPL ITNVKNAKLF IEAIIRKPTF DISSVDYQTS HETFTFPGLV SVQAFVPGAA EESSTDFGEA TEAAIEGGFT IMQMVPQGVN SAVEDEISLQ RAQANASGAA HCDYSFSVAA TADNASRLQD AIAAGAKALY IPFNNFYGAN NKVSSVSQHF AAWPADRPII TDARATDLAS TLLLASLNNR SIHITSVSTK DDLLLIALAK EKGLAVTCDV SIYSLFYCQT DFPDAAKVLP SKADQEALWD NLASIDVFSV GVLPYELGRA LNKPVSARSG VAESLPLLLT AVTEGKLTLE DISLRLSENP RAIFGLPEQS QTYVEIEVNR RSSFTAEDAE RTWSPLDGQA IAGNVHRVVA NNHSIFLDGQ SFSMPFGRDI SASGSRPTKQ ARGSFALQKR PSVTALMSPI SEKTSSAGAK LMSLASVAPI RELSPIRGLV SVQTHPTFSR RHILSVKQFD REDLHALFNV ASEMRTAVER SGSVDTLRGR VLCTLFYEPS TRTSTSFEAA MKRCGGEVVQ VNASTSSVQK GESLADTIRT VGCYADAIAL RHPSVGSAKA AAKSSPVPIL NAGDGIGEHP TQSLLDVFCI REELGSVNGI TVTLIGDLKN GRTVHSLVKL LSLYDVTLNF VSPRSLAMPE SVKTEAFRAG IRFTESFTLT DEIVSRSDVL YVTRVQKERF ENIAEYEAVK DIYVINNDVL EKAKESAIVM HPLPRVNEID PEVDFDSKRA AYFRQMRYGL FVRMALLTLV MGA
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