Gene CNA06000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA06000 
Symbol 
ID3253832 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand
Start bp1601011 
End bp1608493 
Gene Length7483 bp 
Protein Length2333 aa 
Translation table 
GC content52% 
IMG OID638252921 
Productaspartate carbamoyltransferase, putative 
Protein accessionXP_566954 
Protein GI58259083 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ)
[COG0505] Carbamoylphosphate synthase small subunit
[COG0540] Aspartate carbamoyltransferase, catalytic chain 
TIGRFAM ID[TIGR00670] aspartate carbamoyltransferase
[TIGR01368] carbamoyl-phosphate synthase, small subunit
[TIGR01369] carbamoyl-phosphate synthase, large subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00636164 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATCC CCACCCCTCC TGCGTTCCAG GGTGTCGTTC CTCCCAGCGA CATCCCAGCC 
ACCCAACAGG CTTCCAGCTT GGCTCCTGCT GCTCACAGCG CTGTGGCGCC CGAAGCTGAC
ACTCCCACCA TGGAGCGCAC TCCTTCCTCT GCCCCCGTAC CTAGGCCCGC GGGCAGCCTT
TACCCCCCTG CTACTCTCAA GGGTATTGAC TACCAAGGTA TGCCTGACGA GCCCAAATGG
GACGACTCGA TGGGCGAGCC TGATGCCGTC CTTGAGCTTG CTGATGGCCT CGCTCTCGCT
GGTCACTCTT TCGGTGCCAA AAAGTCTGTT GCCGGAGAAT GCGTCTTCCA GACCGGTACG
TATACCGTTC CAGCTAAAAT GACCATGCAA AATTTATTGA CCCCGTCCAG GTATGGTCGG
TTATCCCGAG TCTCTCACCG ATCCTTCATA CTCTTCTCAG ATCCTTATCC TCACCTACCC
CCTGGTCGGT AACTATGGTG TTCCTGAGAG ACCCGACGTG GAGACCTCTC ACGTCCCCAC
TTCCGAGGAT GCTCACAATG TTCCTCCCGC TTCTAGCCTT CTTGACTCCT TGCCTCTTGA
GTTTGAGTCT TCCCACATTC ACGTTGCGGC CCTTGTGGTT GCCAACTATC ACCCTAGCTT
CTCGCACCAC TTGGCCACTT CTTCCTTGGG CAAGTGGCTC GAAGAGCAAG GCATCCCCGC
CATTTGGGGT GTCGACACTA GGATGCTCAC CAAGCGTCTC CGAGAAGGTG GTGTCCTCCT
CGGTCGAGTT CTCAACAAGC GAGCAGGTGT CCTCGATGGC GAGCGAGGTA GGGATGGCCA
GTCTGGCGTC CTTGGCGGCG TTCAGCGTCT CATTAACGGC CTTTCTCCTT CGACCTCTAT
GGCTCAAACC CAGTCCATTG ACAAGTTCAA TGTCAGCTGG CGAGAGGACT TTGAGACCAT
CCCTTATTAC GATCCCAACC ACGAGAATCT TGTAGCCAAG GTGTCTACCA AGGCTCCTGT
TGTCTACACC GCTAGCACCA GCTCCGACAA GAAAATACAC CCTCAGACAG GTAGGCAGAT
GAGGGTTGTG GCCATTGATG TCGGTATGAA GTGGAACCAA ATCAGGTGTT TCAGGGAGCG
TGGTATCGAA GTTAAGGTTG TCCCTTGGGT GAGCTATTTC CACATCGCTC TTCATCCTAC
ATGTTCGGCT AATCTATCGA TAGAATTATG ATATCAACAA CGAATCTGAG CCTTACGATG
GTCTCTTTGT TTCTAACGGT CCTGGTGACC CTTCCATGGT CAAGGAGACT ATCAGCAACC
TTTCTCAAGC CCTCGAGACT TCCAAGGTCC CTATCTTTGG TATTTGTCTT GGTCACCAAC
TTCTCGCCCT TGCTTCCGGT GCCAAGACCC GCAAGATGAA GTACGGTAAT CGTGGTATGA
ACATTCCTTG TACCTGCGCT ACATCTGGTC GATGCTACAT CACCTCTCAG AACCACGGTT
ACGAAGTCGA CGTAACCACC CTCAAGAACG GCTGGGAACC TTTGTTCACC AATGCCAACG
ACGGCTCTAA CGAGGGTATC TGGTGCGGTA AGAACGGTAA ACCCTTCTTC TCCGTTCAGT
TCCACCCCGA GTCTGCTCCT GGTCCTCGAG ACACTGAGTT CCTTTTCGAT GTCTTCATCC
AAAGCATCGT TGACACTGCT CGAGAGGGCA GATTGATCTC CATTGATGTT CCCGGTGGTG
AGCTTGCGAC CAACATCGCT GCCAAGCCCC GAGAGCAGGT CAAGAAGGTT CTTGTCCTTG
GTTCCGGTGG TCTTTCCATT GGACAGGCCG GTGAATTCGA CTACTCCGGT TCCCAAGCCA
TCAAGGCTTT GAAGGAGGAA GGTATCTACA CCATCCTCGT CAACCCCAAT ATTGCCACTA
TCCAAACCTC CAAGGGTCTC GCGGACAAGG TTTACTTCCT TCCCGTCACC CCCGAATTTG
TGCTCAAAAT CATCAAGCAC GAGAAGCCCG ATGGTATCTA CTGTACTTTC GGTGGTCAGA
CCGCCTTGAA TGTCGGTATC AAGCTCAAGG ACGAGTTTAG CAAACTCGGT GTCAAGGTAC
TCGGTACCCC CATTGAGACC ATCATCACCA CCGAAGACCG AGAAATGTTT GCCCGTGCTA
TGGAGGAGAT TGGCGAGAAG TGTGCCGAGT CTGCTACCGC GGTCAACTTG ACAGAGGCTA
TCGAAGCTGC CAATCGAATT GGTTTCCCCG TCATTGTTCG AGCTGCCTAT GCTCTCGGTG
GTTTGGGTTC TGGTTTCGCC AAGGATGTGG AGCAATTGAC AGAGCTGTGT GGCAAGGCCT
TTGCTACTAG TCCTCAAGTT TTGGTTGAGA AGAGTATGAA GGGTTGGAAG GAGATTGAGT
ATGAAGTTGT TAGGGACTGC AGGAACAATT GTATCACCGT GTGTAACATG GAGGTGAGTG
TTGTCCACAT AGGAGACTTT ACCCGAAACT CATAGAATTT ACAGAACTTT GATCCTCTTG
GTATTCACAC TGGTGACTCG ATCGTCGTCG CCCCCTCCCA AACTCTCTCT GATGCGGACT
ACAACATGCT TCGAACTACC GCTGTCAACG TTATCCGACA CCTCGGTGTC GTTGGAGAGT
GTAACATCCA GTATGCGCTC AACCCGTACT CCAAGGAGTA CTGCATCATT GAAGTCAACG
CCCGTCTCTC CCGTTCGTCC GCTTTGGCTT CCAAAGCTAC CGGTTACCCT CTTGCCTTCA
TTGCTGCCAA GTTGGGTTTG AACATTCCTT TGAACGAGAT CCGAAACTCG GTGACCAAGT
TAACTTCAGC GTGCTTTGAG CCTTCTCTTG ACTACTGTGT CGTCAAGATT CCTCGATGGG
ATCTCAAGAA GTTCAACCGC GTGAGCACCG CGTTGAGCTC CTCCATGAAG TCTGTTGGTG
AAGTCATGGC CATCGGCCGT ACTTTCGAAG AGACCATCCA AAAGGCTATC AGGTGTATCG
ACGACCAGCT CCCTGGTTTC GGTGACCACG CCAAGGTTGA GGATCTCGAC TATGAGATTG
CCAACCCTAC CGACAAGAGG TTGTTCGCCA TCGCAGCGGC ATTGAAGAAG GGCTACTCTG
TTGAGAAGTT GAACGAGATG AGCTCTATCG ATCCCTGGTT CTTGACCAGG TTGCAGAGGT
TGATTAAGAC GGAGCAGGTT ATCTCGTAAG TTGAATCATT CACCAGTTTA TTCTCATAGC
TAACTCTTTT TGTAGTCAAT ACAACGCTTC CAACGTTCCT TCCGCCCTCG TTCTTAACGC
TAAGCAGCTT GGTTTTGCTG ACAGGCAGAT CGCCAAGATG CTCAGCTCCA ACGAGCTTGC
TGTTCGTCGT CTCCGTATTG AGGCCGGTAT CACTCCTTTT GTCAAGCAGA TTGACACTGT
CGCCGCTGAG TTCCCCGCGT TCACCAACTA CCTCTACACT ACTTACAACG CCACTGAGCA
TGATGTTGAC TTCGAAGACA ACGGTGTTAT GGTCCTCGGT TCTGGTGTCT ACCGAATCGG
TTCTTCTGTT GAATTCGATT GGTGTGCTGT GAGGGCCATC AGAACATTGA GGGAGAATGG
CATGAAGACA GTCATGATCA ACTACAATCC TGAAACTGTG TCTACCGATT ACGACGAGGC
AGACAAGTTG TACTTTGAGA ACATCTCTCT TGAGACCGTT CTTGACATCT ATGACACTGA
GCACTCTAGC GGTGTCGTTT TGTCCATGGG TGGTCAGACC CCTAACAACA TTGCGCTCGC
GCTTCATCGA CAGAACGTCA AGATCTACGG CACTTCCCCC GAGATGATCG ACACTGCCGA
GAACCGATAC AAATTCTCTC GAATGCTCGA CAAAATTGGT GTTGACCAAC CCTTGTGGAG
GGAGTTGACC TCGTTCCCTG AGGCCAAGGC TTTCTGTGAC AAGGTCGGCT ACCCCGTGCT
TGTCCGTCCA TCTTACGTTT TGTCTGGTGC GGCGATGAAT GTCGTTTTCT CTCAAGATGA
CCTCAACAAC TACCTTACTC AGGCTACCGA CGTTTCCCGA GACCACCCCG TCGTTATCTC
CAAGTACATC GAGGAGGCCA AGGAAATTGA GATGGACGCC GTCGCCAGGG ATGGTAAGAT
GGTGATGCAC TACATCTCCG AGCACGTCGA GAACGCTGGT GTTCACTCTG GTGATGCTAC
GCTCGTGCTT CCCCCTCAGG ACCTCGATGC CGAGACTGTC CGAAAGATTG AGATTGCCAC
ACAAAAGATT GGTCACGCGC TCAACGTTAC CGGTCCTTAC AATATCCAAT TCATTGCCAA
GAACAATGAG ATCAAGGTTA TTGAGTGTAA CCTCCGTGCC GCTCGATCCT TCCCCTTCGT
CTCCAAGGTC ACCGGTATCG ACGCCATCGA AATTGCCACC AAGGTCATGC TCGGTTTGCC
TGTCACCCCC TACCCTGACG TCAAGATGCC CGCCAACTAC GTCGGTGTCA AGGTCCCCCA
GTTCTCTTTC AGCCGATTGT CTGGTGCGGA CCCTGTTCTC GGTGTTGAGA TGGCTTCTAC
TGGTGAAGTC GCTTGTTTCG GTAAAGACAG ATACGATGCC TACTTGAAGG CTCTTATCTC
CACCGGTATC GTCCCTCCCA AGAAGAACAT CCTCTTGTCC ATTGGTTCCT TCAAGGAGAA
GCTTGAGATG CTTCCTTCCG TTCACAAGCT CCACCGAATG GGCTACAACT TGTTTGCTAC
CGCCGGTACT GCCGATTTCA TTCAAGAACA CGGTATCCCG GTCAAGTACC TCGAACAACT
TGGCTCGGAG AACGATCTCA ACCCTCAGAA GAAGGAGTAC TCTTTGAGCC AGCATCTTGC
CAACAACTTG ATCGACTTGT ACATTAACTT GCCTTCCAAG AACAGGTTCC GACGACCGGC
CAGTTACATC TCCCAGGGTT ACAAGTCTAG ACGAATGGCT GTCGACTTTG CTATTCCTCT
GATTACCAAC GTCAAGAATG CCAAGTTGTT CATCGAGGCG ATCATCCGAA AGCCCACATT
CGACATCTCC AGCGTCGATT ACCAAACCTC TCACGAGACT TTCACCTTCC CTGGTCTCGT
CTCCGTTCAG GCCTTTGTTC CTGGTGCTGC TGAGGAGAGC TCTACCGACT TTGGTGAGGC
GACTGAGGCT GCGATTGAGG GTGGATTTAC CATCATGCAG ATGGTGCCTC AGGGTGTCAA
CTCTGCTGTC GAAGACGAAA TCTCTCTTCA GCGAGCCCAG GCTAACGCTT CTGGCGCTGC
CCACTGCGAC TATTCCTTCT CTGTCGCTGC TACTGCCGAC AATGCCTCTC GTTTGCAGGA
TGCCATCGCC GCCGGCGCCA AGGCTCTTTA CATTCCCTTC AACAACTTTT ATGGTGCAAA
CAACAAGGTC AGCAGCGTCT CTCAACACTT TGCTGCCTGG CCTGCCGACA GGCCCATCAT
CACTGATGCT AGGGCTACTG ATCTTGCTTC CACCTTGTTG TTGGCCAGCT TGAACAACAG
GAGCATCCAC ATTACCAGTG TTTCCACCAA GGACGACTTG TTGTTGATCG CGTTAGCTAA
GGAGAAGGGT CTCGCCGTTA CTTGCGACGT TTCCATCTAC TCTCTCTTCT ACTGTCAGAC
TGACTTCCCC GACGCTGCCA AGGTCCTTCC CTCTAAGGCG GATCAGGAGG CTTTGTGGGA
CAACCTTGCC TCCATCGACG TTTTCTCCGT CGGTGTTCTT CCTTACGAGC TCGGCCGAGC
CCTCAACAAG CCCGTTTCTG CCCGATCTGG TGTTGCCGAG TCTCTCCCTC TCTTGCTCAC
TGCCGTCACC GAGGGAAAGC TTACTCTCGA AGACATCTCT CTTCGACTGA GCGAGAACCC
TCGTGCTATC TTCGGCTTGC CCGAGCAGTC CCAGACTTAT GTCGAGATTG AAGTGAACCG
ACGATCCTCT TTCACTGCTG AGGATGCCGA GCGTACTTGG TCACCTCTCG ACGGCCAGGC
CATCGCTGGT AACGTTCACC GAGTCGTCGC CAACAACCAC TCCATTTTCC TTGATGGCCA
AAGCTTCTCG ATGCCCTTCG GCCGGGACAT CTCTGCCTCC GGTTCTCGAC CGACCAAGCA
AGCCCGTGGC TCGTTTGCTC TTCAGAAGCG ACCTTCCGTC ACCGCCCTCA TGTCCCCCAT
CTCCGAGAAG ACCTCATCTG CCGGTGCCAA GCTCATGTCA CTTGCTTCCG TCGCCCCTAT
TCGAGAACTT TCCCCTATTC GTGGCCTCGT GTCTGTCCAG ACCCATCCCA CTTTCTCGCG
TCGACACATC CTCTCAGTGA AGCAATTCGA CCGTGAAGAC TTGCACGCGT TGTTCAATGT
TGCTTCCGAG ATGCGTACTG CGGTTGAACG ATCCGGCTCT GTTGACACTC TTCGAGGCAG
GGTCCTCTGC ACCTTGTTCT ACGAGCCGTC AACGAGGACT AGCACTTCGT TCGAGGCTGC
TATGAAGAGG TGTGGTGGTG AAGTTGTCCA GGTCAATGCT TCTACTTCTT CTGTGCAGAA
GGGTGAGAGC TTGGCAGACA CCATCAGGAC TGTTGGCTGC TACGCCGATG CCATTGCTTT
GCGACATCCC TCTGTGGGTA GCGCCAAGGC TGCGGCCAAG TCCAGCCCTG TGCCCATCTT
GAACGCTGGT GACGGTATTG GAGAGCACCC TACTCAGAGT TTGTTGGATG TCTTTTGTAT
CCGAGAAGAG TTGGGCTCTG TGAACGGTAT CACGGTCACA CTGAGTAAGT TGCCTGATGC
TCTTAACGAT TCTAAAACGC GTGCTGACCA AACGACACTA GTTGGTGATC TCAAGAATGG
TCGAACTGTT CACTCGCTTG TCAAGCTTCT CTCCCTTTAC GACGTGACCC TCAACTTTGT
CTCCCCTCGT TCTCTTGCCA TGCCCGAGTC TGTCAAGACC GAGGCTTTCC GAGCCGGTAT
CCGATTCACC GAGTCTTTCA CTCTCACTGA TGAGATTGTG TCCAGATCTG ACGTCTTGTA
CGTTACTCGA GTGCAGAAAG AGCGATTTGA GAACATTGCG GAGTACGAAG CTGTCAAGGA
CATTTATGTC ATCAACAATG ATGTGCTGGA GAAGGCCAAG GAGTCGGCGA TTGTAATGCA
CCCCTTGCCT AGGGTGAACG AGATTGACCC CGAAGTGGAC TTTGACTCGA AGAGGGCAGC
GTACTTTAGG CAGATGCGAT ACGGTCTTTT CGTGAGTTTT ATGGCAACTT TTTTTTTTCT
GGTACAATTG CTGATCTCGC AAACAGGTCC GGATGGCTCT TCTTACTCTT GTCATGGGTG
CTTAGAGTAT GTAGACTTGG TGGCCCGGCC GGGGTGTCTT GGTGTCAGTG TAGGAGAGTA
GCATTGTGGG GATTGGGTGT TGTGATGGAA GGAAAAGATG TGTTTTTTTT AAAAAGTAAC
TAGATTCATC TCTCTCTATC TTAGTCATGT ACAAATCAAG AAT
 
Protein sequence
MSIPTPPAFQ GVVPPSDIPA TQQASSLAPA AHSAVAPEAD TPTMERTPSS APVPRPAGSL 
YPPATLKGID YQGMPDEPKW DDSMGEPDAV LELADGLALA GHSFGAKKSV AGECVFQTGM
VGYPESLTDP SYSSQILILT YPLVGNYGVP ERPDVETSHV PTSEDAHNVP PASSLLDSLP
LEFESSHIHV AALVVANYHP SFSHHLATSS LGKWLEEQGI PAIWGVDTRM LTKRLREGGV
LLGRVLNKRA GVLDGERGRD GQSGVLGGVQ RLINGLSPST SMAQTQSIDK FNVSWREDFE
TIPYYDPNHE NLVAKVSTKA PVVYTASTSS DKKIHPQTGR QMRVVAIDVG MKWNQIRCFR
ERGIEVKVVP WNYDINNESE PYDGLFVSNG PGDPSMVKET ISNLSQALET SKVPIFGICL
GHQLLALASG AKTRKMKYGN RGMNIPCTCA TSGRCYITSQ NHGYEVDVTT LKNGWEPLFT
NANDGSNEGI WCGKNGKPFF SVQFHPESAP GPRDTEFLFD VFIQSIVDTA REGRLISIDV
PGGELATNIA AKPREQVKKV LVLGSGGLSI GQAGEFDYSG SQAIKALKEE GIYTILVNPN
IATIQTSKGL ADKVYFLPVT PEFVLKIIKH EKPDGIYCTF GGQTALNVGI KLKDEFSKLG
VKVLGTPIET IITTEDREMF ARAMEEIGEK CAESATAVNL TEAIEAANRI GFPVIVRAAY
ALGGLGSGFA KDVEQLTELC GKAFATSPQV LVEKSMKGWK EIEYEVVRDC RNNCITVCNM
ENFDPLGIHT GDSIVVAPSQ TLSDADYNML RTTAVNVIRH LGVVGECNIQ YALNPYSKEY
CIIEVNARLS RSSALASKAT GYPLAFIAAK LGLNIPLNEI RNSVTKLTSA CFEPSLDYCV
VKIPRWDLKK FNRVSTALSS SMKSVGEVMA IGRTFEETIQ KAIRCIDDQL PGFGDHAKVE
DLDYEIANPT DKRLFAIAAA LKKGYSVEKL NEMSSIDPWF LTRLQRLIKT EQVISQYNAS
NVPSALVLNA KQLGFADRQI AKMLSSNELA VRRLRIEAGI TPFVKQIDTV AAEFPAFTNY
LYTTYNATEH DVDFEDNGVM VLGSGVYRIG SSVEFDWCAV RAIRTLRENG MKTVMINYNP
ETVSTDYDEA DKLYFENISL ETVLDIYDTE HSSGVVLSMG GQTPNNIALA LHRQNVKIYG
TSPEMIDTAE NRYKFSRMLD KIGVDQPLWR ELTSFPEAKA FCDKVGYPVL VRPSYVLSGA
AMNVVFSQDD LNNYLTQATD VSRDHPVVIS KYIEEAKEIE MDAVARDGKM VMHYISEHVE
NAGVHSGDAT LVLPPQDLDA ETVRKIEIAT QKIGHALNVT GPYNIQFIAK NNEIKVIECN
LRAARSFPFV SKVTGIDAIE IATKVMLGLP VTPYPDVKMP ANYVGVKVPQ FSFSRLSGAD
PVLGVEMAST GEVACFGKDR YDAYLKALIS TGIVPPKKNI LLSIGSFKEK LEMLPSVHKL
HRMGYNLFAT AGTADFIQEH GIPVKYLEQL GSENDLNPQK KEYSLSQHLA NNLIDLYINL
PSKNRFRRPA SYISQGYKSR RMAVDFAIPL ITNVKNAKLF IEAIIRKPTF DISSVDYQTS
HETFTFPGLV SVQAFVPGAA EESSTDFGEA TEAAIEGGFT IMQMVPQGVN SAVEDEISLQ
RAQANASGAA HCDYSFSVAA TADNASRLQD AIAAGAKALY IPFNNFYGAN NKVSSVSQHF
AAWPADRPII TDARATDLAS TLLLASLNNR SIHITSVSTK DDLLLIALAK EKGLAVTCDV
SIYSLFYCQT DFPDAAKVLP SKADQEALWD NLASIDVFSV GVLPYELGRA LNKPVSARSG
VAESLPLLLT AVTEGKLTLE DISLRLSENP RAIFGLPEQS QTYVEIEVNR RSSFTAEDAE
RTWSPLDGQA IAGNVHRVVA NNHSIFLDGQ SFSMPFGRDI SASGSRPTKQ ARGSFALQKR
PSVTALMSPI SEKTSSAGAK LMSLASVAPI RELSPIRGLV SVQTHPTFSR RHILSVKQFD
REDLHALFNV ASEMRTAVER SGSVDTLRGR VLCTLFYEPS TRTSTSFEAA MKRCGGEVVQ
VNASTSSVQK GESLADTIRT VGCYADAIAL RHPSVGSAKA AAKSSPVPIL NAGDGIGEHP
TQSLLDVFCI REELGSVNGI TVTLIGDLKN GRTVHSLVKL LSLYDVTLNF VSPRSLAMPE
SVKTEAFRAG IRFTESFTLT DEIVSRSDVL YVTRVQKERF ENIAEYEAVK DIYVINNDVL
EKAKESAIVM HPLPRVNEID PEVDFDSKRA AYFRQMRYGL FVRMALLTLV MGA