| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA05480 |
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| Symbol | |
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| ID | 3253216 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006670 |
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| Strand | + |
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| Start bp | 1469420 |
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| End bp | 1472855 |
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| Gene Length | 3436 bp |
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| Protein Length | 944 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | 638252868 |
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| Product | DNA ligase, putative |
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| Protein accession | XP_566872 |
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| Protein GI | 58258919 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GACGGACACT ACTTTCCGTC TGCCATAACG ATCACCTTCC CTCGTCGCTC ATCCACAGCC
TGCCGTCGGC CTTGTAGGCA TCCAAGATGC CCGCTGACAG CAAAGTCAAA AGGGGAGCGA
AACCACAGGC AACACCCATC ACACCGCCCA GTAAGAAATT CAAGCAAGCG GCTGTCACCC
AACAACGTCC CATATCCTCT TTTTTTCACT CACCTGTTAA AAGCAGCATC AAGGGCAAGG
AGGTCATTAT CATAGAAGAT TCAGATTCAG ATGATTATCC TGAGTCCTCA ACCCAGGCGG
CGATAGCACA TGACGGGAAT GGTGATGTGG AATCATCCAG AAACCATGTT CTTCAACTAC
CTGAAGAGAA TCAGATAAGC TCCCTCAGCT GTGTAAAGGA GAAAGATGGA CATGGTATGG
CCAGTACTTC AAAAGTTTTT CATGAAAGAT CGAAGACAAC GCCCAATGGG ACGGCTATCT
CGTCACGAAC GGAAGGACAA AGTGATCGAG TGCACTACTT CTCCCGAAAA TCCCAGAGAA
CAATAACTGG GGACGAACCT GTTCCTCCCT CCAGTATCAC TACTTGTGCT TCAGAAGACT
CGGTTCAAAA TATAGATTTT GATCGCGACC CTCTCGCCTT CGATCCGTCC CGGGTTATAG
CAACTTCCTG GCCCAAGGGT CGTTTACCGT ACAGTATTCT CGTCAGCGTG TATGTACAGC
TCTCCAGTAC AAAGTCGCGA TTAGCTATCG TACGAATCTT AACAAAGTAC GTTCAAAATC
CGTCCCTGAA TTGGTACCTA TGCATGCTAA ACAAATGTTA ACCCATCATG CAGCTTCCTT
CATTTGCTCA TGCACACTTC ACCACCTGAT TTGACACCTT GCCTTTATCT CCTTTCCAAT
CACCTTACCC CTTCCTACAT CCATTGTGAT CTTGGCATTG GATCTTCTAT ATTGTCCAAA
AGTATACAAG AAATTTCGGG CCTTCAAGCT CGCGATCTCA AACACCTATG GCAAAAATAT
GGCGATCCTG GCGATGTTGC TTTCGAAGCG AAAAACAAAC TACGAACTTT GGTGCAACCA
GCTCCGCTTT TGGCTGGAGA AGTGTATGAT AAGTTGCTGG AAATTGCGAA AGTGAAGGGC
AGTAATAGCG GGAAAATAAA AAATGAGCTA GTCAGAAAGT TGTTGATTCG GGCCAAAGGA
GAGGAAGTCA GATTTCTTGT CCGAAGTATA GTAGGCAACT TGAGGGTAAG CTTAGATGCC
CTTTTCAAGG CCCGTCTTTG GACTCATTAG AGTGATTTAC TGCAGATAGG TGCCGTCAGG
CTGGTAGGTC TCGTTTGCAA CTATCCAAGC TACAATTTCT AATTTATTGA CAGACCCTTC
TGACCGCCTT GGCACGCGCC ACCACTATAA CACGGCTTCC AGCTGACCTT AAGCAGTCTA
TAATACCCCT TCCAAGGGCT ACAGCCAACG ATGGCAGGAA TGATAAACGC TCAGTCATTA
CTAAAGCACC TCCAGACGTT GCCCGCGATT CCGCAGAGAC TCTCTGTCTA GATGCCATAC
GCATAGTACG GAAAGTGTAT GTACGACATC CAAATTACGA AGATCTTGTA GCCGGCCTCA
AGGAAGGAGT TGAAAGTTTG GAGGATAAAG TGCCTGTGAG CGTAGGGATT CCACTGTCTC
CCATGCTGGG GTCCATCACA AGATCACTGA ACGAGGTGTT CACGAGACTG GGACATCTTT
CGTTTACAGC AGAGGCGAAG TTAGATGGTC AGAGAGGACA ACTTCATATC AGACTGGATG
GCCCGGAAGG AAAAGATGAT GGAGGGGGGA GATGGGTTTA TGCGGATAAT GGTACTAAAG
TTTGGGTTAG GCTATTCAGC AGGTAGGTGA AGATGTTTAA CATGCGCTCT GTATTTGTGC
TTAGGAGGCA TGTGACGGAT TGGCAGGCAC TTGGAAGACA TGACCGACAA GTACCCCGAT
ATCTGTCACC TAGCTCTTGA TCTTCTCTCG CGACCCCTTG CAACAGAAAG GCCGCCATTC
CCAGCCGTTT CCAGTCGACC ATTTTCAAGA GTCATCGATT TACTACACAT CAATAATATC
ACATCAGTGG TTATGGATAC CGAGATTGTA GCACTGGACA AGGATACCGG TAACTTTCGA
ACCTTTCAAG AACTGTCTAA CAGAGCGAAA AAAGACGTGA AAATGGAGGA AATTAAAGTT
ATAGTTGGGG TCTTTGCTTT TGATTTAATG GTGCTCAATG ATGTCGTAAG TAGTTGAACT
CGGCTGCTTA ACGGTAATAA TCCTATGCTG AATCTCTCAA AGTCATTACT GGACGTCCCT
TTTTCACATC GGAGACATCT CCTTCACAGT CTGCTCCCCC CTTTCGCTCC CAATTCAAAT
GAAGTTGGAC ACCCAGTGGC ACGTTTCACA CATGTCGAAT ACATTGATTC TGTCCATCTC
ACTGATCCTG AGGCGGAATT GCAAGCATTC TTCGAGAGGG TTGTGGAAAA AAAGTGCGAA
GGCTTGATGG TCAAATTGCT GGAAAACGGG GAAGGCTTGG CTGGGGAAGA GGCGACAGAA
GATAGTTTAG GTCAAGAAGG GGGCCTGGAA GTTAAGTCGG AGCAGAAGAA TGGGAGTAAG
AGTAAGCGTC AACCTCTTCC CGCTACATAC GAGCCAGATC AGCGCAGTCA AGGTTGGCTC
AAGGTAAAGA AAGGTAAGTG TGGTTGTGAA TTGATTCTGC TTCCAGAAGC CTCTCTGACC
TCCCTCAAGA TTATCTAGAA GGGTTAGGGG ATTCTCTCGA TCTCGTGCCC ATTGGCGCGT
GGTGGGGTCA GGGCCGTAAA GCGGGTTGGT GGAGTCCTAT TCTCTTAGCC TGCCACAATC
CTGATAGTGG CGCCCTGGAA GCGGTCTGCA AATGCATGTC CGGTAAGTTT TGTTCGAAAA
GGCTGTGATG TTGAAGCTGA CCAAACTGTA CTAGGGTTTT CTGACGCATT CTACAAAGAT
CTTAGCAAGC GCTATCCTGC CGAAGGAATG CCGAGTAAAT GCAGCAAAAT AGCACCTATT
GGATTTGTAA ATACGAACGG CTTAATACCA GACGTGTGGT TTGAGCCTAG CGAAGTATGG
GAGATTAAAG GTGCTGAGTA AGTAACGAAA GGCAAGTTTT ACTATATTCT GGCTGATAGG
CTGGTAGCAT CACCCTCTCT CCGGTCTATC CGGCGGCTTC ATCGCATCTT GGATCTGAAA
GAGGGTTGAG TGTCCGATTC CCTCGTTTCA TACGCATGCG AGACGACAAG ACATGGGAGG
ACGCTATGAC AAGTGATCAG CTTGCCGATA TGTACAGACG CCAGATAAAA GAAGGCGAGA
AGACAACCAA AAACTAGCCA GTCATGTTAA TTCTCAACTT TGTAGAGATC TATAATGAAA
AACATGCGCC TATACA
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| Protein sequence | MPADSKVKRG AKPQATPITP PSKKFKQAAV TQQRPISSFF HSPVKSSIKG KEVIIIEDSD
SDDYPESSTQ AAIAHDGNGD VESSRNHVLQ LPEENQISSL SCVKEKDGHG MASTSKVFHE
RSKTTPNGTA ISSRTEGQSD RVHYFSRKSQ RTITGDEPVP PSSITTCASE DSVQNIDFDR
DPLAFDPSRV IATSWPKGRL PYSILVSVYV QLSSTKSRLA IVRILTNFLH LLMHTSPPDL
TPCLYLLSNH LTPSYIHCDL GIGSSILSKS IQEISGLQAR DLKHLWQKYG DPGDVAFEAK
NKLRTLVQPA PLLAGEVYDK LLEIAKVKGS NSGKIKNELV RKLLIRAKGE EVRFLVRSIV
GNLRIGAVRL TLLTALARAT TITRLPADLK QSIIPLPRAT ANDGRNDKRS VITKAPPDVA
RDSAETLCLD AIRIVRKVYV RHPNYEDLVA GLKEGVESLE DKVPVSVGIP LSPMLGSITR
SLNEVFTRLG HLSFTAEAKL DGQRGQLHIR LDGPEGKDDG GGRWVYADNG TKVWVRLFSR
HLEDMTDKYP DICHLALDLL SRPLATERPP FPAVSSRPFS RVIDLLHINN ITSVVMDTEI
VALDKDTGNF RTFQELSNRA KKDVKMEEIK VIVGVFAFDL MVLNDVSLLD VPFSHRRHLL
HSLLPPFAPN SNEVGHPVAR FTHVEYIDSV HLTDPEAELQ AFFERVVEKK CEGLMVKLLE
NGEGLAGEEA TEDSLGQEGG LEVKSEQKNG SKSKRQPLPA TYEPDQRSQG WLKVKKDYLE
GLGDSLDLVP IGAWWGQGRK AGWWSPILLA CHNPDSGALE AVCKCMSGFS DAFYKDLSKR
YPAEGMPSKC SKIAPIGFVN TNGLIPDVWF EPSEVWEIKG ADITLSPVYP AASSHLGSER
GLSVRFPRFI RMRDDKTWED AMTSDQLADM YRRQIKEGEK TTKN
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