| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA03560 |
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| Symbol | |
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| ID | 3253755 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006670 |
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| Strand | + |
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| Start bp | 920683 |
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| End bp | 925951 |
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| Gene Length | 5269 bp |
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| Protein Length | 1450 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | 638252686 |
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| Product | conserved hypothetical protein |
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| Protein accession | XP_566696 |
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| Protein GI | 58258567 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00609757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGCCCGCCAC TCCGCCGCCC TTGCCCATGG CGAAGAAAAA GCTCTCCCTC AAGCGTAAGC
CACACCCCGG CGTCCCCCGC TGACCGCCAG CCCAGAACAG GGGCTTTGCA ACCACTTCCC
TCCCCAAAAA GGCGGCCCCG CCACCTGCTC CACCACCCGC GGACTCCCCG CCCGCCCCGC
CACCCCAGGC CCCCCCGTCC TCCTCGCCAC CTCCCGCCGA CTGGGAGCAC GAGGAAGGTG
CGGAGGAAGC CGCCCTCCAG AGTCTCGTCG ACAGGCTGCA GGACAAGGCT GAAAAGGAAG
TCGCCCGCAT AGTAAAGGTA CGATCATGCC CTCCACCAAA AATGCAGATC TTACAGCCAT
GATGTTCAGG CCATTGAATA CGACTCTCGT CTGGCAGCCT CGTTCCCCAA GCTTGATATC
AACCAGGCCA TCCGAGATAC CGCCCTTGAG TTGGCATTGG AGGAAGAGAA AGCAGCCTGC
CAAGGTGAAT GGCATCCAAG ACACGCAGAA AGAATCTCAC TGAACGACCT TTCGCAGATA
CCGATCATCC TCCCGTCGTG ACCTTTCCAT CGACCACCGT TTCAGACTCA GATAAAGGAC
TGTTGCGGTA CTTTGTCGCT TATCACGTTC TTCAAAATCT CGGCTTCCGA CAAGAGAGGA
TTGAGCAATG CCTCCTACAA GGTATAAAAG AGGGAGAGGG CTGGGAAGAA GCTCTTGAAT
GGGTGTGTCT GGTCGGCAAA AGGCTTTCAT TACTGACAAA TGTTACAGAT GTGGTTGCAT
CTCAGCGAGG ATGAGTGCCT CCAACGAGGA GAGTATGAAA GGACAACCGG TACGCTTTGC
TAGGTGAAGG AATGGACTGA CCTTGATTTT CAATTTTTTA GAGCCCAGTA TAACTGAGAA
TCAGGAATCA CTCGTTCCCG CCATTGAACC GGACGTTGAA CCTATCGCTC AGCCCGCGCA
GTCTTCAAGA CCCACACGAA CCGCACTGCA GGCCACTGAC GCCAGCACCG AAGCTCGCAC
CACGGCCCAC AAATCACTAT TTCAAAGTCA AGATACATCG GATACCGAGT CTGACTCTGG
AACTGAAGAC GAATACCACA TCAACGAGCA ATGGGCAAAA TTGCAGTTGG AACTTGATAC
CCTTCGTATG GCGTCTGGAG AAGGGAAAAA AGGTAAAAAG GGAAAGGGTA ACCAAGTCAT
ACTGGAAACG CCGGAGATAA GAAGGCTCAA GGACAAGATT GGCAAAGTGG AAAAGGAGTA
CATGTTTACT CGCAAGAATG CCGGTGCGTT CCTTACAAAC CTTTATGTGC ATCCATTCTA
ACTTACATGT AGATGCTATA CTCAAAGTTT TGAGAAATCA AAGAGATGTC GCAGCCATTG
CCGCCAAGTT CAAGGGCGCT TCCATTCAGG ACGCTGATCA GACCGAAACC GATTCTCCTT
CGGGAAATAC TCAAGGTGAT TCGATTGTAG AGGAAAAGAC TAACCTTATG GATGGGTCGT
CTGACGAGGA GGGAGATCTT TTTGGTGGTA TGCTGGACGA GCCCACTACT CTCCCCGGTA
CACCGGCTGA AACATCGACT TCAACACACA TTACAGTCCG ATCCATGCCC ATCCCAAAGC
AAATGTCATT TGCTGGTACC ATTCCGAAAA ACGTTCTCAA AGCAGCCCTC GCCAAACAGA
CAAAGCAGGT TGTCATATCG TATGTCAACT TATCTGGTGC CAGTCGCGCC GCAAGGGCTG
GCCTGGAAAT TGGTTGGCAA GGAGGTGGAA GGAAGGTCTG GAAGATGGAT GATATTGCTT
GTGATGATAT GGTTGAGGCG GAGAACTATG TGTCGACACT CGCACTCTCG GATTTAGAGG
CAGAAAAAAC CGTTGCAGGA GTTAACTGGA GGACAATGCC GCCCTCATAC AGAGAATTAT
GGGAAGAGCT GAAGGTGAAG AGGCAAGAAA GAGAGGACGA AAGTAGAAGG GGCATTTGGA
AGATGATTAA GGGCATATGG GATAAGAAGG CCGTTGAAGC GACTGCAGAG AAGAACGACA
CGTCAAAACC TAGCACTAGC AATACTCCGA TTGACCCACC TGCGAGGCCG GCGAAAGAGA
AGGAAGACGT CATTATTCAA AAGCTTCAAG ATGATTTTGC CAAACGAAAA GAGTCATCAG
CGTACCAGAC AATGCTTACT CAGCGCAACA CACTTCCGAT CGCTTCATTC CGTGATCAAA
TCATTTCCAC TTTGGACACC AATCAGATCT TGGTGTTTAG CGGTGAGACT GGTTGCGGTA
AATCTACTCA ACTACCGTCC TTCATCCTCG AAGACCAACT GGCCAGGGGA AAGCCTTGTA
AAATAGTCGT GACCGAGCCT CGACGTATCA GTGCTATTTC CTTGGCTCAA CGAGTATCCC
AGGAACTGGG CGATGCCCCA GGTGCGGTTG GCACCTCATC CTCGCTTGTT GGCTACAGCA
TTCGTCTGGA ATCGAAAACT TCGGCCAATA CTCGTCTGTC ATTCGTGACG AATGGTATTG
CACTTCGTAT GCTTGAGTCT GGTTCCAGCG GTAGTTCCAG AGGCACCGCA TTTGACGAAG
TCACACATAT CATCGTGGAC GAAGTCCATG AACGTTCAAT CGAGTCAGAC TTTTTGCTCA
TCGTTTTGAA GAATCTTTGT GAAGCAAGGA AAGATCTCAA GGTTGTTTTA ATGTCAGCCA
CCGTAGATGC TGAGAAAATT TCGGCCTTTT TCGGAGGTTG CCCTTTCATG TCCGTACCTG
GAAGAACGTT CCCTGTCACT GTGCAATATC TTGAAGACGC TGTTGAGCTC GCTGGGTGGC
ACATCGACGG ATCTTCTCCA TATGCCATTC GAGGCAAGAA ATTCAAGCCA GCGAGTCAAA
TGGTGGAGTG GAACGAAGAA GGGGCTAAAT CTGATTCGGA TCCAGACGAT GAAGACGAGG
AAACAGCGTT TAACCCTGCA AAGCTGTCGT CAAACAAGTA CTCTGCTCAG ACAGTCGACA
CTATCAATAT TCTGGATTCT CGATTAATTC CATATGATCT CATCGTCTTG CTGCTCGAGA
AGATTTGCTT TGAAGCTGCC GATTATGTGC CCTTTTCTCA GGCAACTTTG GTATTCATGC
CGGGCCTGGC TGAAATTAGA AAGCTGAACG ACATGCTGCT CGCCCATCCA AAATTCGGCA
GTACGGACTT TGTGGTGTGG CCTTTACATT CCAGTATTTC TTCCGAGGGG CAGAGTGCGG
TATTCAAGAG GCCTCCGGAA GGAGTGAGGA AGATTGTAAT CTGTGAGTCA TAGTTGTGAA
TTGTTGAATT TCACTAACTT TTCTGATCTA GCTACCAACA TTGCAGGTGA GGACAACAAA
AAGTCTCCAA TGACAAGCGC ATTCTAACCT GATTCTTTTC CCAGAAACTG GTGTTACCAT
CCCAGATATC ACATGCGTTA TCGACACAGG AAAGCAGCGT GAAATGCGGT GAGTTTTATC
CACAACCGTT TCTTCCCAGA AATTCATTAT GATGTTCTTT AGCTATGACG AGAAGCGACA
GCTTTCGCGA TTTGTCGAAT CGTATGTTGC AAGAAGCAAC GCTAAACAAC GTCGCGGACG
AGCCGGTCGT GTTCAGGAAG GCCTTGCGTT CCATTTGTTC ACCAAGGCCA GACATGATAC
GCAGGCAGGT TTATTTGAAA TTACTATCAG GAAAATTCGG CTTATTCATT GTAGCTTCCT
GATCATCCTA TTCCCGAGAT GCTTAGGCTC TCTCTCCAAG ACCTTGCTCT TCGTATCAAA
ATTCTCAAAG TACCTCTCGG CAAGACTGTT GAATCTGTCT TGTTGCAGGC GCTTGATCCG
CCTTCGTCGA TCAACATTCA ACGTGCTATC GCTTCTCTAG TTGAGGTCAA AGCGCTCACG
CCAAATGAGG AGATCACACC CTTAGGACGG CTACTTTCCA AACTCCCCAT GGACGTCCAT
CTCGGAAAGT TTCTACTTGT GGCCGCTATG CTTGGATGCC TAGACCCGGC TTTGACAATT
GCAGCAACGT TAAACTCCAA AAGCCCATTT GTGACTCCGT TTGGCTTTGA GTCGCAGGCC
AGAGCTGCTA AGCGGAGTTT TGCCATTGGT AGGTCTGGAT GTGTTAAGCA TGTAAATTTT
CGTAGCTCAG TCGAGACTTT TCTTTTTAGG AAATAACGAC TTTTTCACTA TTGCAAACGT
CTTTGCAAGC TGGAGAAGAG CTTCTGACAA TCCCCACTTT GTGAGAACTT TTTGTAAGAA
AAACTTTGTA TCTCATCAGG TCTGTCATAT ATCTCTCAAT CTATGACTTT TATGTTGAAA
TACTGATTTT GCGGATATAG AACCTGCAAC AAATTGAGGA ACTCAGACAG CAACTTCTTG
CGTAAGTTTA CTCGGCTAGT ATTGATATGA AGTCCCGACA CTCATGGGTG CATATAGATA
CCTCATTGAT ACATCTTTTG TCGATGCTAC GCCTGCTCAG AGGCAGGCGA TCAGCCAGTG
AGTGCCAAGT GATGACTTCC AGTGCGAGCA TAAGATTAAT CGAAGTCGGA TTTCAGGGGC
CGCTTCTCTC GTGGCGTGCG AACCAAATTT GTTCCTGTGC CTCCGGAATT GAACATCAAT
GGAGAGGATC TGAAAGTAGT TGGAGCGGCC CTGGTTTCCG GTCTGTACCC CAAACTGCTA
GCTCTCGATG CTTCTGGCGG CATGAAAACC ATAACAAACC AGCAACCAGT CGCAATTGTA
CGTTGTTTGT GCACTTCACG TGGACTGCAA AAATCTGACA GCAATCACAG CACCCAAGTT
CCGTCAACTT TAAAGTTCAC AAGGGCGAGT TTGGTTCAAA TTATCTGGCA TACTTTACCA
TCATGCATTC CAAGAGATTG TATGCCTGGG AAACGGGACC AGTGGACGAC GCGGCGCTGG
CGTTGCTATG TGGTGATATT GCAGACTTCA AGGTATGTCA TGGTCCGTTG TTGTTGTAAT
AGAGGACTGA CTTTTAGCCA CGGACAGGTA TCAGCGTCCT CATTCATTCT TGACAGGAAG
ATCAAATACA GCTTGTCGCC CAAGACGTCC ATCGCTATCA AACTGATTCG AGAGCAATTT
TATCAGGTAA TGTCATTGCG CTTTAGAGGA AAGAAACTGT CAGACAACCA ACAAAGATGG
TTTGAGCTTG GTCTCAAGTG TCTCGCAGCT GGACTGCAAG ACGAGGAGGC GGCGAAAATT
TGTGTGGTAT AGAATATGTA GCACGTTTTT CACAGTTCCG CAATACAAC
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| Protein sequence | MAKKKLSLKP QNRGFATTSL PKKAAPPPAP PPADSPPAPP PQAPPSSSPP PADWEHEEGA
EEAALQSLVD RLQDKAEKEV ARIVKAIEYD SRLAASFPKL DINQAIRDTA LELALEEEKA
ACQDTDHPPV VTFPSTTVSD SDKGLLRYFV AYHVLQNLGF RQERIEQCLL QGIKEGEGWE
EALEWMWLHL SEDECLQRGE YERTTEPSIT ENQESLVPAI EPDVEPIAQP AQSSRPTRTA
LQATDASTEA RTTAHKSLFQ SQDTSDTESD SGTEDEYHIN EQWAKLQLEL DTLRMASGEG
KKGKKGKGNQ VILETPEIRR LKDKIGKVEK EYMFTRKNAD AILKVLRNQR DVAAIAAKFK
GASIQDADQT ETDSPSGNTQ GDSIVEEKTN LMDGSSDEEG DLFGGMLDEP TTLPGTPAET
STSTHITVRS MPIPKQMSFA GTIPKNVLKA ALAKQTKQVV ISYVNLSGAS RAARAGLEIG
WQGGGRKVWK MDDIACDDMV EAENYVSTLA LSDLEAEKTV AGVNWRTMPP SYRELWEELK
VKRQEREDES RRGIWKMIKG IWDKKAVEAT AEKNDTSKPS TSNTPIDPPA RPAKEKEDVI
IQKLQDDFAK RKESSAYQTM LTQRNTLPIA SFRDQIISTL DTNQILVFSG ETGCGKSTQL
PSFILEDQLA RGKPCKIVVT EPRRISAISL AQRVSQELGD APGAVGTSSS LVGYSIRLES
KTSANTRLSF VTNGIALRML ESGSSGSSRG TAFDEVTHII VDEVHERSIE SDFLLIVLKN
LCEARKDLKV VLMSATVDAE KISAFFGGCP FMSVPGRTFP VTVQYLEDAV ELAGWHIDGS
SPYAIRGKKF KPASQMVEWN EEGAKSDSDP DDEDEETAFN PAKLSSNKYS AQTVDTINIL
DSRLIPYDLI VLLLEKICFE AADYVPFSQA TLVFMPGLAE IRKLNDMLLA HPKFGSTDFV
VWPLHSSISS EGQSAVFKRP PEGVRKIVIS TNIAETGVTI PDITCVIDTG KQREMRDSFR
DLSNRMLQEA TLNNVADEPV VFRKALRSIC SPRPDMIRRQ LPDHPIPEML RLSLQDLALR
IKILKVPLGK TVESVLLQAL DPPSSINIQR AIASLVEVKA LTPNEEITPL GRLLSKLPMD
VHLGKFLLVA AMLGCLDPAL TIAATLNSKS PFVTPFGFES QARAAKRSFA IGNNDFFTIA
NVFASWRRAS DNPHFVRTFC KKNFVSHQNL QQIEELRQQL LAYLIDTSFV DATPAQRQAI
SQGRFSRGVR TKFVPVPPEL NINGEDLKVV GAALVSGLYP KLLALDASGG MKTITNQQPV
AIHPSSVNFK VHKGEFGSNY LAYFTIMHSK RLYAWETGPV DDAALALLCG DIADFKVSAS
SFILDRKIKY SLSPKTSIAI KLIREQFYQV MSLRFRGKKL SDNQQRWFEL GLKCLAAGLQ
DEEAAKICVV
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