Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNA03170 |
Symbol | |
ID | 3253386 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006670 |
Strand | - |
Start bp | 836319 |
End bp | 838137 |
Gene Length | 1819 bp |
Protein Length | 399 aa |
Translation table | |
GC content | 47% |
IMG OID | 638252648 |
Product | conserved hypothetical protein |
Protein accession | XP_566758 |
Protein GI | 58258691 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00254863 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TGCAAATCAA GAAAGGTAAT GTTAAATTGC TCTCATTCTT CGTTCTTTGT GTCCTTGGTG AAGACACTCA AAATTGTCTG AACCCTTACG TAATGTGCAC TTCATGGTGG AAGAGTCGCA CTTTGAGAGT TCGGGGGGAT CCCAGGGAAA AGAAATCCTT GCGTAAGCAC TTTTGCAACA TTAATTAAAT ATCCTTCTTT GTTGATGAAC AAATAAATAA ATCCACCGTG CTCGCCAGTG TCCAGCACTG ATTACTCGAT ATTGCAACGA TAATCTCAAG TTCATCTTCG AAGCGAACTC ATTCCTCACC ATGTCCGACC TCCCATTACC CCAATTCTAC GCTCACTCCC TCGTCCCTCT CGCCCCCATC TTCGATGACA CCCTTTCTCT CTCATCCCCT GAAGCTCAGT CCACTTTATC CATCGCGCTC GATAAACTAT ATCTCATCCA ACGCATGCTC ACGTCCCTCG GCGCATTTTC TGAGAATGAG TCAGTATCCG AGGCCAGCAA CGGACAACTA CTTTTTATGA GCATTGGATG GGCCATTGGC TCCTGTGAAG AGAAGCGAAA TCCCGGCAGT ATGCCAGAGA GGAGAGAAGC TTTACTAAAA GCGGAAGTGA GTCACGTCAT CTGTCGGAGA TGGGTAATTT AAGGATGTCT AACACTTTTT TACCCGTAAT CAGTACGCTT TCCAGGCATT TGTAGAGTTA CTGTCCTCGT ATGGTATCCT GTCATCGCAA GAAGCATCCG AGTACTCTGT GGGTAACAGA GCCGGTCTTC CTAACGATCC GGCCAAGAGA CGCGAGGCAA AGATTAATCA GTACAAGAAA GAGAAAGAAC TTCGTGAGAA GATCAATGTG AGTCTGTCTT TTCGCCTTCA TCAAACATGT TAAGACCGTT AAGTCCTGAC CAATTTTTTC CTTGGCGTAG GCTGCCATAT CACGCCGCAA GCAAGTGTCT GCTTCAACTC CCGTCTCTTT CTTGATCTCT CTGTTGCCAG AACCTCCCGC TGAAGCATCG ACGGTTCAAT CAACACAGGC GCGGGATGTG AATGAAGATG ACATGGCAGA AGAATCTAGA GAAACCATCA TCAACGTCCT GCGTCTTCTC TATTCCTTAG CGCTGTCTTC TATGGCTTCC ATGAAGATGG AACTTGATAT CCTCTCTTCT GCACCTCCTG TTGATCCATC CCAGGGTATA CCCCACACAG ACCTGCGTCA AGGCGGAAGA GGGGAGAACG ACGATACTTG GCGCCTCGAC CAGTTGCCGA CATCTTTGGC TCGGTCGTCA GATCTCATAT CCTCAAAAGG CAAAGTCTTA CGACCTTTCA CAATCCTGCC AAGCGATACT GGAGTAGCAC AGAGAGAAAA GTTGAAGGCG GGAGTTTTCA AGCAGAGTTG GAGATTGCCA ACGATGACTA TAGACGAGTA CCTCGATATC GAAAGACAAA GGGGTAATGT CATAACTGGT GGCGGGTGCG TTTTCCCCTC ACAAAGATGT CGTGCAGCGG CAATAGCTCA TGTTGTTAAA CTACAGTCAA GCATCTTATG ATAAACCGAC GGACTCTGAG CTGCTGGAAT TGGACTCGGA AATGGATGGT ACATTGCACG CTGAACAACA AGCTGAGCAT AAGCGAGAGA AAGATGAAAA GTGGGCCCAA TACACGGATG ATAACCCAAA GGGATATGGA AATACAACGA ACAAGGGGTA AAAGTGTGGA CCATACATGG CAATCAGCAA CGCCAGGGCA CCGTATGGTT AGATCTTGTC TCAATATTAT AAATCAGATT ACACAATGAA TGAGACAGAA ACTTCCTTT
|
Protein sequence | MSDLPLPQFY AHSLVPLAPI FDDTLSLSSP EAQSTLSIAL DKLYLIQRML TSLGAFSENE SVSEASNGQL LFMSIGWAIG SCEEKRNPGS MPERREALLK AEYAFQAFVE LLSSYGILSS QEASEYSVGN RAGLPNDPAK RREAKINQYK KEKELREKIN AAISRRKQVS ASTPVSFLIS LLPEPPAEAS TVQSTQARDV NEDDMAEESR ETIINVLRLL YSLALSSMAS MKMELDILSS APPVDPSQGI PHTDLRQGGR GENDDTWRLD QLPTSLARSS DLISSKGKVL RPFTILPSDT GVAQREKLKA GVFKQSWRLP TMTIDEYLDI ERQRGNVITG GGQASYDKPT DSELLELDSE MDGTLHAEQQ AEHKREKDEK WAQYTDDNPK GYGNTTNKG
|
| |