Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNA02180 |
Symbol | |
ID | 3253584 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006670 |
Strand | + |
Start bp | 572742 |
End bp | 574482 |
Gene Length | 1741 bp |
Protein Length | 485 aa |
Translation table | |
GC content | 48% |
IMG OID | 638252550 |
Product | cytoplasm protein, putative |
Protein accession | XP_566606 |
Protein GI | 58258387 |
COG category | [S] Function unknown |
COG ID | [COG1723] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.51774 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTTGC TTGATCTCTC TAATCTCAGA AAAATGTTCA AGCGACTCCC TAGAACCCTT TTGCAGCCCT CATCTAGGCC TCCGCAAGTC TGCTCTCAAT GCCGCAATCT ATCTCAATTG CGCGCACCAG TGCACATTTC CCAGTTCCCT CGATATGCCT CTACTATCTC CGACAGACAA ACTAAGCAGG CTCGTATGAG CAAGCTCCCT GTGTCTCATA AACCTCCGAA ACGACGGCTA GAAGCCGCTT CTCAACCACT TCGAAATGCA GCTTCCATAA CAAGAGGGCC GGTTTTGCAG TGTATTGCCC ATACAACAGC AGAAAAGTAC GATCTTATCG CTCTAGGCAC AACTCTCCAG TCTTTGGGTG TTCGATGGGA CGAAGTACCA GAAGGCGACC CCGATAGGGC GCTGGTTATT GGACCATGGA AAGGGCGTGG TGGTGCGGAA CGTCTGATTA GCGGAAAGGA CGTTCGGTCT ACATCCACTA TAGCTAAGAG CCCTGCGGTC GAGTGGGCCG AAAACGAGGG GGTGGATCTG AGAGATATGG GGTTTGGCTA CGGAGAAAGA GGCGAAATAT GGGTATTTAG CTCTGGCTCC TTCGTTACAT GGGGCCTAAC CGAAGAGGAG GGAAAGGCGT TTTTGAGGCA AGTGATCAGA GGTGGTCGGA ATGTTGAAAT CGACCGAGTG TCCCCGAAGG AATGCGAACT GGAGGAAGTA GATTTTGTCG TCGATCCTAC AGCGTGAGTC TGAAATCGGG TCTCTTTGAA GTGCTAAAAG TGCCGCAGCA AGACACACAT CCTCGGTAAC CTCATCCTAC TCGGTCGACC ACCTCAGCTG TCGACGTTTC ATTATTCCCC TTCTCTTGCC TCTTTATTAG CCAGATATAC CTTGTCACTG TCGCTCTCCC GATCATCGTC CTTATCAGTC CTTGAAGAGC GGCTAGACAA TCATTTAGCA TCTGTATCAA TTCTGCCTAG GACTTTAGAA ATGTATGGAC GTCAGCCTTT ACCTCGTAAA GAGGTGATCA GAAAAATGGG AGAATTAATG ACTTTGAGGA TGGCTGTCAA CACAGCTGGT GGAGGACTGG ATGATACCCC TGAAGTGTGC TTTCCCCCTT GACATTGGGC CAATTCTGAC TATTTCACTT AGTTCTATTG GTCTGAACCC GAACTAGAAT GTGAGTCAGT CGAGTTGAGA GACGAATTCA GGTCATGCTG ACTTGCTTTA GCCTATTTCG ACTCTGTTGC AAGCGAGTTC GAAATAAAGG AGCGTATAGA TGTATTTAAC AAAAAAATCG ACTACGCTCA AGAAGTGCAA AGCACCCTGC GGGCACTTTT AACCGAAGTA AGCATTTGGC GCTATTTTAT TTTCGAAGAG CTAACGTCAT GCAGTCATCG GGGCACAGGA TGGAGATGAT CATTATATTG CTCATCAGTG TGGAAGTTGT TATCGTAAGC ACGCTAATTT CTATCATCTT GGCGCATCCC ACAGGTTAAA TATGCGACAG GTCCTTATCC GTGAAGGTCC CGACCTTATT CACAAGCTGT TGGAGATCGT CGGAGTGGCC CCGGCAGAGG CTGAAGATAT TACAGAGAAT ATCCAGAAGG TCGCCGATAA GTTACCTTCA ATAGGTGCCA TTTCATCGCC AGCGATTCGT CATACAACAA CACACTGGGC AGATGGTTCT GAACGATATG TATAAACTAA ATAGATTCCA AGATTCTCAT GCACTTCTCA T
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Protein sequence | MRLLDLSNLR KMFKRLPRTL LQPSSRPPQV CSQCRNLSQL RAPVHISQFP RYASTISDRQ TKQARMSKLP VSHKPPKRRL EAASQPLRNA ASITRGPVLQ CIAHTTAEKY DLIALGTTLQ SLGVRWDEVP EGDPDRALVI GPWKGRGGAE RLISGKDVRS TSTIAKSPAV EWAENEGVDL RDMGFGYGER GEIWVFSSGS FVTWGLTEEE GKAFLRQVIR GGRNVEIDRV SPKECELEEV DFVVDPTAKT HILGNLILLG RPPQLSTFHY SPSLASLLAR YTLSLSLSRS SSLSVLEERL DNHLASVSIL PRTLEMYGRQ PLPRKEVIRK MGELMTLRMA VNTAGGGLDD TPEFYWSEPE LESYFDSVAS EFEIKERIDV FNKKIDYAQE VQSTLRALLT ESSGHRMEMI IILLISVEVV IVLIREGPDL IHKLLEIVGV APAEAEDITE NIQKVADKLP SIGAISSPAI RHTTTHWADG SERYV
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