Gene CNA02180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA02180 
Symbol 
ID3253584 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand
Start bp572742 
End bp574482 
Gene Length1741 bp 
Protein Length485 aa 
Translation table 
GC content48% 
IMG OID638252550 
Productcytoplasm protein, putative 
Protein accessionXP_566606 
Protein GI58258387 
COG category[S] Function unknown 
COG ID[COG1723] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.51774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTTGC TTGATCTCTC TAATCTCAGA AAAATGTTCA AGCGACTCCC TAGAACCCTT 
TTGCAGCCCT CATCTAGGCC TCCGCAAGTC TGCTCTCAAT GCCGCAATCT ATCTCAATTG
CGCGCACCAG TGCACATTTC CCAGTTCCCT CGATATGCCT CTACTATCTC CGACAGACAA
ACTAAGCAGG CTCGTATGAG CAAGCTCCCT GTGTCTCATA AACCTCCGAA ACGACGGCTA
GAAGCCGCTT CTCAACCACT TCGAAATGCA GCTTCCATAA CAAGAGGGCC GGTTTTGCAG
TGTATTGCCC ATACAACAGC AGAAAAGTAC GATCTTATCG CTCTAGGCAC AACTCTCCAG
TCTTTGGGTG TTCGATGGGA CGAAGTACCA GAAGGCGACC CCGATAGGGC GCTGGTTATT
GGACCATGGA AAGGGCGTGG TGGTGCGGAA CGTCTGATTA GCGGAAAGGA CGTTCGGTCT
ACATCCACTA TAGCTAAGAG CCCTGCGGTC GAGTGGGCCG AAAACGAGGG GGTGGATCTG
AGAGATATGG GGTTTGGCTA CGGAGAAAGA GGCGAAATAT GGGTATTTAG CTCTGGCTCC
TTCGTTACAT GGGGCCTAAC CGAAGAGGAG GGAAAGGCGT TTTTGAGGCA AGTGATCAGA
GGTGGTCGGA ATGTTGAAAT CGACCGAGTG TCCCCGAAGG AATGCGAACT GGAGGAAGTA
GATTTTGTCG TCGATCCTAC AGCGTGAGTC TGAAATCGGG TCTCTTTGAA GTGCTAAAAG
TGCCGCAGCA AGACACACAT CCTCGGTAAC CTCATCCTAC TCGGTCGACC ACCTCAGCTG
TCGACGTTTC ATTATTCCCC TTCTCTTGCC TCTTTATTAG CCAGATATAC CTTGTCACTG
TCGCTCTCCC GATCATCGTC CTTATCAGTC CTTGAAGAGC GGCTAGACAA TCATTTAGCA
TCTGTATCAA TTCTGCCTAG GACTTTAGAA ATGTATGGAC GTCAGCCTTT ACCTCGTAAA
GAGGTGATCA GAAAAATGGG AGAATTAATG ACTTTGAGGA TGGCTGTCAA CACAGCTGGT
GGAGGACTGG ATGATACCCC TGAAGTGTGC TTTCCCCCTT GACATTGGGC CAATTCTGAC
TATTTCACTT AGTTCTATTG GTCTGAACCC GAACTAGAAT GTGAGTCAGT CGAGTTGAGA
GACGAATTCA GGTCATGCTG ACTTGCTTTA GCCTATTTCG ACTCTGTTGC AAGCGAGTTC
GAAATAAAGG AGCGTATAGA TGTATTTAAC AAAAAAATCG ACTACGCTCA AGAAGTGCAA
AGCACCCTGC GGGCACTTTT AACCGAAGTA AGCATTTGGC GCTATTTTAT TTTCGAAGAG
CTAACGTCAT GCAGTCATCG GGGCACAGGA TGGAGATGAT CATTATATTG CTCATCAGTG
TGGAAGTTGT TATCGTAAGC ACGCTAATTT CTATCATCTT GGCGCATCCC ACAGGTTAAA
TATGCGACAG GTCCTTATCC GTGAAGGTCC CGACCTTATT CACAAGCTGT TGGAGATCGT
CGGAGTGGCC CCGGCAGAGG CTGAAGATAT TACAGAGAAT ATCCAGAAGG TCGCCGATAA
GTTACCTTCA ATAGGTGCCA TTTCATCGCC AGCGATTCGT CATACAACAA CACACTGGGC
AGATGGTTCT GAACGATATG TATAAACTAA ATAGATTCCA AGATTCTCAT GCACTTCTCA
T
 
Protein sequence
MRLLDLSNLR KMFKRLPRTL LQPSSRPPQV CSQCRNLSQL RAPVHISQFP RYASTISDRQ 
TKQARMSKLP VSHKPPKRRL EAASQPLRNA ASITRGPVLQ CIAHTTAEKY DLIALGTTLQ
SLGVRWDEVP EGDPDRALVI GPWKGRGGAE RLISGKDVRS TSTIAKSPAV EWAENEGVDL
RDMGFGYGER GEIWVFSSGS FVTWGLTEEE GKAFLRQVIR GGRNVEIDRV SPKECELEEV
DFVVDPTAKT HILGNLILLG RPPQLSTFHY SPSLASLLAR YTLSLSLSRS SSLSVLEERL
DNHLASVSIL PRTLEMYGRQ PLPRKEVIRK MGELMTLRMA VNTAGGGLDD TPEFYWSEPE
LESYFDSVAS EFEIKERIDV FNKKIDYAQE VQSTLRALLT ESSGHRMEMI IILLISVEVV
IVLIREGPDL IHKLLEIVGV APAEAEDITE NIQKVADKLP SIGAISSPAI RHTTTHWADG
SERYV