Gene CNA00980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA00980 
Symbol 
ID3253864 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand
Start bp274164 
End bp276111 
Gene Length1948 bp 
Protein Length518 aa 
Translation table 
GC content52% 
IMG OID638252430 
Producthypothetical protein 
Protein accessionXP_566527 
Protein GI58258229 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.437946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCTTC AGGATAAACT GCCGCAACTC AAGATCGTCC AGATCTCCTC TTCCCTGGCC 
GTCGGACATG CGCTTCCCCC CTCTTCTCTG CCCGAGAACA TCCCCCTCTG CCCTTCGCTC
CCTCCGTCCG CTCCCCGCCC TCTCATCGTC GCGTCCTCTC CACACATCCC TCGCTCATCC
TAACAGCTCC CAATCCCAGT CAGACCTTCC AGTCGACGGT GCCACTGACC TCTCCCATTC
CCATTTCATC TCTTCTGCCT CTCCCAGCTC TGATTTCAAC CCTGCCCAAA CACCCAATGC
AGGGCAAGAC ATCGCTCATG CATTAAAGGC TCAGTGGGAG GGCAAACTGT CCCCAACTAC
GTCCCACCTG TTCAAGCTTA TTGTGCCCCT TCCGGCACCT GGCTGCCAAC CGGGCCAAAC
TCCGACACCC CGTCCTACAG CTTTTCTTTT ACATCCTTCC CAGCCTTTGT CTCATTTGAG
CAGACTTATC TCAGGCTCCC TCCCACCACC TTATACCCAC TCGGACATCT CTTACCTCGC
TCTAACCGGC TCGGAGTCCG ATGTAGATAC ACACTTGCGT AATGCCGAAA AGTCCTCGGA
TAACAGCTCT ACAAATGAGA ACGACTATGC AGGTCGTGAT GAAGGTGGTC CTTTCCTGAC
CGAAAGAAAA GGGGAAGGCG GTAGATGGCA GGAAGTCGCC TGGAGCCAAA GTACTGACCT
GAGCGATTTT ATCAAGCAGA GCTGCTTGAA TGAAAAGTTT AAGATTGTCA TTTCGCCTGA
AAGAGACAGG GATGGGGCGC AGCTCAAGGG GAAAGAGACA GAGTTACGTG AGCTGGTTCT
GCAGGTGCTC ATACCGAGCT TTGCTAGTCG GACACATTAC ATTCGCAAAA GACTATTGTC
CTTGACTAAA GATCTGGATA CACTCAACAA AGAAAAAAGG AGGTGTGTTC CCGAAACCTG
CCTTTCTTGC AGTTCAAGGA CTGACCCTTG GATAGGATTG ACTATGCTGC CCACAAGGGT
GCGCAGAGAT TGGCAGTCAT GGCGCTTGGA GGTGGTGTAG TCTACTGGGG TACTATTATC
CGTTTTAGTG CGTTTGTCAC CTTCAGCTAG TGTCAGAGCA TATCCTAACG CGATATACAG
CCTTCTTCAC AGACGCCGGA TGGGACATGA TGGAGCCTGT CACCTGGGCT ACAGGCTTCG
CCGCCCTTCT TGGATCAGCC GCTTTCCTCA TGTAAGTCTC ATGAGTCTTT CTCCACCTAG
TTTCCTATGG CGCCTGACGG AGAACAAACG CAAAATTAGC TACCACAACC GCGAAGTCTC
CTACTCTTCC CTCCTCGACC TCTCCATCAC CGCCCGCCAA CGTAAACTCT ACGCGGAGGC
AGGGCTAGAC CTCGAAAAAT GGACAGAGAT GGTCGCTGAA GCGAAAGCGT TGCGGAAGGA
GATTGAGAGA ATCGCAGCGG ATTATGACAT TGAATGGCGT GGAGAGTTGG AAGGTTTGGA
AAAGGTTGGT AGTCGGGAAG GGGCCGGTGG AGGTTCGCCG AGGGTAGGGT TGCCTGGTGT
AGAGATAGGG GAAAAGAAGG AGGATGTAAG AGAGAACGTT GATGCCAAGG ATGGAAGTAA
AGAGGGGGAA AGGAAAGAGA TGGAAGAGGA GAATGAGACC AAACTGCAAG GGGAGGAAGG
AAAAGTAGAG ACGGAAAAAA TTGATGTCGA CAAGACGATC GATGAGGCGT CAGAGTTGGC
TGAAGAGTCC GGGGAACAGC GAAGTCGCAC CAAGGCTGCG CAAAGAAACG GAGAAGTCAT
GGATTCGTCG GATGATGACA AGGGGTCTAA AACTAGAAAG GGTGAAGAGC AAGAGAGTGA
TAGCGTAACC AAAGGCAGAG CAGCTGCCAA AAAGGTTATT AACGAAAAAT AGATTCCCTG
TAGCCATAAC CTAGCATGCC ATACACCC
 
Protein sequence
MFLQDKLPQL KIVQISSSLA VGHALPPSSL PENIPLCPSL PPSQSQSDLP VDGATDLSHS 
HFISSASPSS DFNPAQTPNA GQDIAHALKA QWEGKLSPTT SHLFKLIVPL PAPGCQPGQT
PTPRPTAFLL HPSQPLSHLS RLISGSLPPP YTHSDISYLA LTGSESDVDT HLRNAEKSSD
NSSTNENDYA GRDEGGPFLT ERKGEGGRWQ EVAWSQSTDL SDFIKQSCLN EKFKIVISPE
RDRDGAQLKG KETEIDYAAH KGAQRLAVMA LGGGVVYWGT IIRFTFFTDA GWDMMEPVTW
ATGFAALLGS AAFLIYHNRE VSYSSLLDLS ITARQRKLYA EAGLDLEKWT EMVAEAKALR
KEIERIAADY DIEWRGELEG LEKVGSREGA GGGSPRVGLP GVEIGEKKED VRENVDAKDG
SKEGERKEME EENETKLQGE EGKVETEKID VDKTIDEASE LAEESGEQRS RTKAAQRNGE
VMDSSDDDKG SKTRKGEEQE SDSVTKGRAA AKKVINEK