Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNA00870 |
Symbol | |
ID | 3253881 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006670 |
Strand | + |
Start bp | 244911 |
End bp | 246723 |
Gene Length | 1813 bp |
Protein Length | 521 aa |
Translation table | |
GC content | 48% |
IMG OID | 638252419 |
Product | expressed protein |
Protein accession | XP_566514 |
Protein GI | 58258203 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0378248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATTTTCACTT TATTCTCTAC CATCAATCCA TTTCGAGCAT GCCCCATAGA CCAAGTCCCA AGCCTCCATC GTCATTGCCG TCCCCTTCAC GGCCACAAGA ATCACAAATA GAGGTACTCT ACAACACGGC CGTTCAATCC TTTGTTAGGC GGGACCATGT CAAGACCCAA GCAACGCTCG CACGGCTGCT CGAGTCTTTA AAAAAGAAGA GGATTGGACC TTATAGAACA TGGTACAAAC TGGATGGGGC TAAACCTGAC AATGAGAATT CGGAAGCAGC TGCGAATGAC GACTGGATGG TCAAAACACT CAAGCTGCTC ATCAGTTCAA CGGCTTCGCT ATACGCTGAT CCTCCTAACA ATACCACAGC TCTTCCTGAG CTCCTGGTCT CTATGTTGCC CCCTAAATCC CCAAAAGAGA TTTTATCGTA TCTCCAACAT CGTTGTATGA GCGCGTATTA CTCCAAAGGA GCGACAGCAC ATCTTCTACC TCCCCAATTG GTATCCACTC TTATCCTGGC GTCTCTCAAG CTTTCACCAC AAAGATCTGC ATTGGACTTT GCCCATTCAA TGACAGAGTC ATGGATAGCG TCTTTACCAG ACTCTTTGAT ACTCTCCATT AGCCCTACAA GCTCTTACCG GCCTAAAGAC CCAATCGAAC GCAAGCGGGT CGAGAGTGCG CGGGAAGGAT ATTTGAAAGT TGTAGAGCTT TTTATCGGCG AAGTTTTGAG TCGTGAAGAG GAATGGGAGA TGGCAAGGGG ATTCTTGGAG GGTGAAGTTG TTATGTCTTC AAAGAAGAAA GAGGTGCGTA CTATCATTCC TATCCCCTTC TCTGTCCATA CACAGACTAA TATCGAATTT AAAAGACACT GTACAAACAT CTTAGAACAC TTGAATCCAA GGCTTCCCTC CCCTCTCTAG CCCCATCCCC TTCCTCATCC CTCATTCTCC CTTCTTCCTC CGATTCCTTA TCCATTGAAG AGGAAAAAGA AAGTAAGATA CGCTCCCGAT TATCAAGGTC ATCAAGCACA TCATCATCCA GCTCAAGCTC GAGCGAAGCT ACCGCTCGTC CCGGTACTTC CCAGAATGGC GGTCTCCTGG GTACAGGTCT CGCTCTAGGC CAAAGAATGG AGCAGCTGAG ACAGATACGA AAGGCTGGTA AGGATAGGGG AGAGGAATCA CCGCGTCCTG GTTCTATTGC GAGTCAAGCA TCAGGGTCTG GTATCTCTGA AAGCACTTAT CGCCTTGTCC ATTCGAATTT TAGACGCAAT TCATCTTCCC GGCGAGGAAA TGATGTCCCA ACCTCCAGAC CAGATAATTT GCACCATATC CTTCAATCTT TGCTCGGTCG CCTACCTACA TCCCTATCAA CCACTCTCCA ATCCCTCTCC CCCGTCGTTC TGACGGTCAT CACTATACCG TTGCCTTTAC TTATCATTTT TACCATTATC CGACTCCGTC GATCGAGATT CGCGCGCCAG CAGACGACAG TAGTAGGAGG AGCGAGAGGG GGCTCGCGCA ATACGGTATT ACAAGTCCAA CATCGACTGC AAAGGGTTAG AACTCAGCAG AGAGGATGGT GGGATTGGGT ATTGTGGTAT TTGAGATGGT GGTTAGCCAA ATTTGCGGGT GTTTGGAAGC TGGGTACGAC GATCACGTAT GTTTGATCAA GAGTCTATCA GGGTTTTGGC GGGGGAACGC ATTGTTTTTT GCACCGGATC GCAACTTTGA CAGCGTATGG CTCTTGTAGC AAGTTGTATT GATGCATTAT CGAGTAAAAG ATATAAAACA AGCAACAATC AGGTGATTAA TGT
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Protein sequence | MPHRPSPKPP SSLPSPSRPQ ESQIEVLYNT AVQSFVRRDH VKTQATLARL LESLKKKRIG PYRTWYKLDG AKPDNENSEA AANDDWMVKT LKLLISSTAS LYADPPNNTT ALPELLVSML PPKSPKEILS YLQHRCMSAY YSKGATAHLL PPQLVSTLIL ASLKLSPQRS ALDFAHSMTE SWIASLPDSL ILSISPTSSY RPKDPIERKR VESAREGYLK VVELFIGEVL SREEEWEMAR GFLEGEVVMS SKKKETLYKH LRTLESKASL PSLAPSPSSS LILPSSSDSL SIEEEKESKI RSRLSRSSST SSSSSSSSEA TARPGTSQNG GLLGTGLALG QRMEQLRQIR KAGKDRGEES PRPGSIASQA SGSGISESTY RLVHSNFRRN SSSRRGNDVP TSRPDNLHHI LQSLLGRLPT SLSTTLQSLS PVVLTVITIP LPLLIIFTII RLRRSRFARQ QTTVVGGARG GSRNTVLQVQ HRLQRVRTQQ RGWWDWVLWY LRWWLAKFAG VWKLGTTITY V
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