| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA00670 |
|---|
| Symbol | |
|---|
| ID | 3253894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006670 |
|---|
| Strand | + |
|---|
| Start bp | 191885 |
|---|
| End bp | 194717 |
|---|
| Gene Length | 2833 bp |
|---|
| Protein Length | 835 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | 638252400 |
|---|
| Product | sulfate transporter, putative |
|---|
| Protein accession | XP_566490 |
|---|
| Protein GI | 58258155 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
|---|
| TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.122332 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTGACAAAAA ATCGCTTCTT GGTGAATTCA CCTTTCAGTC AATCCCGCCA TATCATCTCC
CATCTTAATC TGAAGACGTG CTGGCTCCCG CTGTCTTCTT CACCTTTTTA GACAAATAGA
TTCGATAGAT GGGTCTTATA AAGAGTAGCC TTGGGAATTC GAATAAAGGA AAATTCGTAG
ATTGTTCAAC ACCACCACTA CACAACTCGT CCTTCATTCG TATTCAGGAA GATAGTTCAT
CTACGGCGGC AGCGAGAACA TCGACTCAGG AAGATCTCCA CGCCTCCATG TCTCCCGATA
TCAAGCCTAG CTTCCGCCCC GAGGTGGTCA AGAGTAAAAT CAAGCACTAT TTTGGTTATA
CGGAAACAAC ACCAGAGACT GTCTCCGTCT TTGACTGGGC AAGGAGTCAG ACTCCAGCTC
TTGGGCCAGG AGTGAGTGAT GCATTCACTT CCCAGATGAC TGTTCTGACT ATTTTTCAGA
TCAAAGCTTA TATCCTCTCT CTTTTCCCCT TCATTCAATG GGTTCCCCGA TACAACTTGA
CGTGGTTGTT TGGTGACCTC GTGGCGTGAG TAGGCTTCTT CTTTCCGTGG TAATGGCTGA
CCAATCATCC ACAGTGGTAT CACCGTTGGT ATGGTCCTTG TTCCCCAATC GCTTTCTTAT
GCCAAAATTG CCGAACTCGA GCCCCAATAC GGTTTATACT CTTCTTTCAT CGGTGTCCTT
ACCTATGCCT TTTTTGCCAC ATCCAAGGAT GTTTCCATCG GTCCGGTCGC CGTCATGTCT
CTCGAGACTG GTAACATCAT TCTCAGTGTG CAAGACAAGT ACGGCGATCT TTACTCCAAG
CCTGTTATCG CTACTGCTTT GGCGTTCATC TGTGGATTCA TCGTCTTGGG TATCGGATTA
TTGAGGATTG GATGGCTCGT TGAGTTCAGT GAGTTCGGAG TTTTTTTCGA GTCGCCAGGA
GCCGCAGTTT GCTGACATAA TCCATAGTTC CTCAACCTGC CGTCTCTGGT TTCATGACTG
GTAGTGCTCT TAACATCGCC GCTGGCCAAT TCCCGGCTGT TTTTGGTCTG TCCAAGAAGT
TTGACACTCG TGCTGCCACA TACAAGGTTA TCATCAACAC TCTCAAGTAC TTGCCCCAGG
CATCGCTCGA CACCGCTTTC GGTATGACTG CACTTGCTGC CCTTTACGGA ATCAAGTGGG
GATTTACCTG GCTCGGTAAA CGATACCCTC GCTATGGCCG AATCACTTTC TTCTGCCAAT
CTCTTCGACA CGCCTTTGTC ATCATCATCT GGACCATCAT CTCTTGGCGA GTCAACGTTC
ACGCCGCCTC GCCTCGCATT TCCCTCGTCG GCAATGTCCC TTCGGGTTTG CAACACGTAG
GCCGACCTTT CATTGATAGC CAACTGCTTT CTGCCATCGG TCCCCACATT CCTGTTGCCA
CTATCATCCT TCTTCTCGAG CACATCTCCA TTGCCAAATC TTTCGGTCGG TTGAACGGTT
ATAAGATTAA CCCTAACCAA GAGCTTATTG CTATCGGTGT TAACAACACC ATCGGTACTC
TTTTCTCTGC GTACCCCTCC ACCGGTTCTT TCTCTCGATC TGCCCTCAAG TCTAAGGCTG
GTGTGCGCAC CCCTGCTGCG GGTCTCGCCA CCGGTGTTGT CGTCATCGTT GCCTTGTACG
CAGTCGCACC GGCCTTTTAC TGGATTCCCA ACGCGGCTCT TTCTGCCTTG ATTATTCACG
CCGTCGCCGA CCTTGTCGCT TCTCCCAAGC ACTCTTACAG CTTCTGGCGA GTTGCCCCCA
TTGAATACGT GATCTTCGTT GGTGCGGTTC TTTGGTCCGT TTTTTACACC ATCGAGTCAG
GTATCTATTG GTCTCTTGCC ACCTCTGTCG TTCTCTTGCT TCTTCGTATC GCTCGACCCA
AAGGTCACTT CCTCGGGCGT GTACGAATCA AGCCTGAGGC TGGTAACACC CTTGAGCACA
TCCGAGATGT CTACGTTCCC CTTGATGAAG AATCTTCTGG GGAAGATGTC AAGGTTGAGA
ACCCTCCTGC CGGTGTCATA ATCTACCGAT TCGAAGAGTC TTTCCTCTAC CCTAACGCTT
CTTATATCAA TGACCGACTT ATCGAACAGG CCAAGAAGGT AACCAGGCGA GGTGGTGACT
ACTCCAAGGT TGCAGCGGGC GACCGACCTT GGAATGACCC AGGACCCAGC AAGAAGAACG
CGGCGGCGGT TATAGAGGCT GACATGGTCA AGCCTGTACT CAAGGCTGTT ATCCTTGACT
TTGCTGCTGT TGCCAACCTT GATACCACTG GTGTGCAAAA TTTGATCGAC ACCAAGACGG
AGATGGAGAA ATGGGCCGAT GGTCCTGTCG AGTTCCACTT TTGCGGTATT CTTTCACCTT
GGATCCGACG TGCTCTTGTT GCTGGTGGAT TTGGTCAAGG CCGTGCCAAG GAAGGTGCCG
CTCTTGAAGT AGCTCCTGCT GTCATCGAGA ATCTTGAGAA CGCTGCTTCC CCGGGAATGG
AGAGGGAGAG GTATAATGAG CATGAAGTCT CTTTCATTCA CGAGGTCGGT CAAGCTTCCA
ACTCAACTTC CGCCGGTACT TCTTTCAGCG AGGAGGAGAA GAGGATTGGC TCTGGAGCCA
CCACACCATC TCCTCAATTG GATGGGGTTA ACGAAAGAAG ACCGAGCGGT GTATCAACCA
AGACTGTTCC ATTGTTAGAC AGGTCAACAC CTTTCTTCCA CTTTGACCTG GCCGATGCCT
TGAACTCGTT GAACTTACCT GAGAATGAGT GATTTGTATG ACGTGTAAAG GGGTCTGGGG
CTTATTTGTA GTG
|
|---|
| Protein sequence | MGLIKSSLGN SNKGKFVDCS TPPLHNSSFI RIQEDSSSTA AARTSTQEDL HASMSPDIKP
SFRPEVVKSK IKHYFGYTET TPETVSVFDW ARSQTPALGP GIKAYILSLF PFIQWVPRYN
LTWLFGDLVA GITVGMVLVP QSLSYAKIAE LEPQYGLYSS FIGVLTYAFF ATSKDVSIGP
VAVMSLETGN IILSVQDKYG DLYSKPVIAT ALAFICGFIV LGIGLLRIGW LVEFIPQPAV
SGFMTGSALN IAAGQFPAVF GLSKKFDTRA ATYKVIINTL KYLPQASLDT AFGMTALAAL
YGIKWGFTWL GKRYPRYGRI TFFCQSLRHA FVIIIWTIIS WRVNVHAASP RISLVGNVPS
GLQHVGRPFI DSQLLSAIGP HIPVATIILL LEHISIAKSF GRLNGYKINP NQELIAIGVN
NTIGTLFSAY PSTGSFSRSA LKSKAGVRTP AAGLATGVVV IVALYAVAPA FYWIPNAALS
ALIIHAVADL VASPKHSYSF WRVAPIEYVI FVGAVLWSVF YTIESGIYWS LATSVVLLLL
RIARPKGHFL GRVRIKPEAG NTLEHIRDVY VPLDEESSGE DVKVENPPAG VIIYRFEESF
LYPNASYIND RLIEQAKKVT RRGGDYSKVA AGDRPWNDPG PSKKNAAAVI EADMVKPVLK
AVILDFAAVA NLDTTGVQNL IDTKTEMEKW ADGPVEFHFC GILSPWIRRA LVAGGFGQGR
AKEGAALEVA PAVIENLENA ASPGMERERY NEHEVSFIHE VGQASNSTSA GTSFSEEEKR
IGSGATTPSP QLDGVNERRP SGVSTKTVPL LDRSTPFFHF DLADALNSLN LPENE
|
|---|
| |