Gene CNA00460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA00460 
Symbol 
ID3253501 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand
Start bp133655 
End bp135951 
Gene Length2297 bp 
Protein Length674 aa 
Translation table 
GC content51% 
IMG OID638252380 
Productexpressed protein 
Protein accessionXP_566474 
Protein GI58258123 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GACGTAACAT TGTTTTATAA CCGTTTACAA TTCACTATCG CCATTCTTTT CGCCATTGAA 
GACCAACTTG TCTATCGCCT ACAATTGCAA TCTCCATCAT CAAGGTCTGA CAAAAGATGG
AAACGGCTCC GCTCACTCTC AAGGTGTTCG TGGAGGTTCT GTTGATATGA TTAAGTGCCC
TTTGTGCTGA CATGGGTTTT AAGCTTACAT ATATCCCCCT TGACTCTCAT TCCAACATCA
AACCCCGATG CATCAGCTTC CATCCCACCT ATTCCTCTCC CGCCGCCTCC GCCTCCCGCA
GGATTCAACT TTTCGCCCAC GCCCAACTAC CCACCACCCT TCGGCTCGAT CCCGTTAGGT
TCCAAACTCG ACCTTAGAGT AGGCCTCGAG AATGTCCATC GGCAGCGGTA TGGCGTGCAT
GGAGTAAGGA TGATGGTGGA GGTCCAATCT GCGTCAGGTC GAGTGCGATT GGGTGAGGCC
ATACATGGTC AAATATCCGA CACTTCCAGC GAACAACCGC TTCAAGAAGG GCAGGAAAGT
CAGTTACCAG AACTCAAGTT TGGCGAAATG GTTGAACTGG GGGTGGAGAG TGAGATGAAG
GACCTAGGTT TGGGTGTCGT GATTGTGAGC GTAGCTTGGG AGACACTGGA TGGGCGAAAG
ACATTTCAAA GGTTCTTCAA GTTCAACGTA GGTTGGTTTG TCGGGATGAA CTGGATGCAT
AAACTGACTA TATATCGATA GATTATAACA CCTCTGGGAA TCAAGACTCG GGTTCAGATA
CCCTCCCATC CTAATTCAAC ACTTTCGCTT TCTCTGCGCG AACAGACTTA CCTCGAAGTG
TTCATGCAGA ACACATCCCT CGAAAGTATG CTCATATCTG GGATATCGCT GGAACCAGTA
GAAGGATTGA AGGTGAACAA AATAGGAGGC TCGGAGATGG ACGGCGAGGA ACTGATAGTA
GGGGGCACGA GGCAGTATCT GTTTGTGGTT GATTCGTCTC CATCAAATGA CGACGAAGGT
GCGAAACAAG GCAAGTCTAT ATTCCCACCA ACATATCCTG CGGGCGCAGT GCTCCCTCTT
GGAAGACTAT TGGTTGAATG GATTTCGGGT CCTTATCATA CCCCTGGTAA ACTCCTTACT
TCTATGCTCA ATCGTCGTGC CCCTGCTCCC CGGCTTCCTT CAATCACTCA ACCTCATCCC
ACACCCACCC GAACACTGAG TGCAGCCCCG CCCACTCCCA GCAAAGGGCC AACAGCTCTT
GACACTGGCT CTGGGACACT CGCCACACCT CGGCGAGGGC TTAGCCCCAA TCCCGATTCA
ATACCTTCCC CGCGACACCG TCCGCTACCA TCTCCTTCAC CAAAGTGGGC ATTCGATTTG
ACTTTAAATG GTTCGCGAAA AGTCCCTTTG CAGTCTGAGT GGTATCTCAC ACTCAATCTT
GCGGTGCGAT CGGCAGCCCC TATCCAGGAT TCCTCAGAAG AACAAGCAGT GCCTACACTA
CCACGATTAG GTATACAGTA CTTAACACCA GTCGAACCGC CTCTTGTAGA TGGTGCGCAA
TCGGAAACAG ACCACAGTAG ACAGTCACAG CAAGGCAATC CTCAGATGAT GCTCTCTCCA
CCCTCCCGCA CTTCCACTCC CGCTTCACCG GCATTATCCT CCGCCGGCCG CCCATTGTCG
CCATTCACAA CCACTTCAAC GGCATCAACA TCAATCGCTG GTATCTCCGG AATAAGCAGA
TCTACCACTC CTTTGAGAGC AGAGTTGAAA TCTGCAGTGG GCAGCATGAT TGGGCCGAAC
CCTTTTACGA GCGCTTTTTT CAAAAAGATA CAGACCGCCC CTGATGACGA CCAGGAGGAG
AAGGAATCTA GGGCGTCTTT TCCCCCTATA GCCAGTGTCG TACCCAACCC CGATTACAAA
CCTTCCGCAT CTCTAGATAA AAGCGCAGGC CCTGTGCAAA TTTACCACAT CGGATCTTCG
CTCATCTTCC CCGATTTCCC GCCTCTTACT CCCAAATTTG AGAATCTTGG GCTACAACCA
CTGTCTGCTG GTGGATCAGA AAAGAAAGAG AGGGAAAGCG AAAAAGTAGC AAAGAAGTAT
TGGGAGACGA GTGTGCAGTG GCAATGGAAA TTTGTTGGAT TTGAAGAGGG ACTCGGAGTA
CTGGGAGGCG CGAGAGTTCT GATTTCTGAA GGTGAAGATG AAGGCGTAAT TGGACGGGAG
TGGGAGTGTT TGGGGGATGT CACGGTGTCG TGACTGCGTG TATTGACATA TACTCATTCC
AACTATGCCC GATGTGC
 
Protein sequence
METAPLTLKV LHISPLTLIP TSNPDASASI PPIPLPPPPP PAGFNFSPTP NYPPPFGSIP 
LGSKLDLRVG LENVHRQRYG VHGVRMMVEV QSASGRVRLG EAIHGQISDT SSEQPLQEGQ
ESQLPELKFG EMVELGVESE MKDLGLGVVI VSVAWETLDG RKTFQRFFKF NIITPLGIKT
RVQIPSHPNS TLSLSLREQT YLEVFMQNTS LESMLISGIS LEPVEGLKVN KIGGSEMDGE
ELIVGGTRQY LFVVDSSPSN DDEGAKQGKS IFPPTYPAGA VLPLGRLLVE WISGPYHTPG
KLLTSMLNRR APAPRLPSIT QPHPTPTRTL SAAPPTPSKG PTALDTGSGT LATPRRGLSP
NPDSIPSPRH RPLPSPSPKW AFDLTLNGSR KVPLQSEWYL TLNLAVRSAA PIQDSSEEQA
VPTLPRLGIQ YLTPVEPPLV DGAQSETDHS RQSQQGNPQM MLSPPSRTST PASPALSSAG
RPLSPFTTTS TASTSIAGIS GISRSTTPLR AELKSAVGSM IGPNPFTSAF FKKIQTAPDD
DQEEKESRAS FPPIASVVPN PDYKPSASLD KSAGPVQIYH IGSSLIFPDF PPLTPKFENL
GLQPLSAGGS EKKERESEKV AKKYWETSVQ WQWKFVGFEE GLGVLGGARV LISEGEDEGV
IGREWECLGD VTVS