Gene CNA00340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA00340 
Symbol 
ID3253495 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand
Start bp110962 
End bp112420 
Gene Length1459 bp 
Protein Length417 aa 
Translation table 
GC content54% 
IMG OID638252368 
Productexpressed protein 
Protein accessionXP_566466 
Protein GI58258107 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCCGTTTTCC ATCTTCACTT AAAGTCTCAA ACATGTCAGA TCCTCTAAAT GCTGCTAGCC 
TTTTGGGCCT TCTTCCAACG TTACTACCTC AGGGAACAAC ATCGCCCTTG CCGCTCTCCA
CCGACGCCAT TGCGGCCTTG GTACACGCAA TCCATACCGC CCTTCAATTC CGCCTAATCT
CGCCTGCGCC TCAGCCAGTA GATGATAACT CCAAGTTAGA ACAACCAAGG TCTGGTGGCG
ATAACGATGA TGCCATGTCT GAAGTTACAG CGGTCGAGCA GGAGGACAAT TCACAACCGC
CCATTGGACG ACTTGCCGAA GGGTGGAACA GTCGAGGTGA AGATTCCTAC TCATTCCAGT
ACCGGCATGA TCAAAGTGCT ATGAATTTTA GGGTCAGAGT AGGGAAAATG GGCAACAGAG
TTCAGATCGA CGCTATGGCT GAGGTGAGTG TTAGCGCACT GAACGTGTCA AGAAAGCAGT
GGCATCAAGG TCCGGATGCT TATGCCTGTG TCGTTTGAAA GGATGGTGAA CCACATAATC
TGTCTGTTGT CAGATCTGAA TTAGTAGATT CCGGGCTGTT CCCAATCCCG AGCTCGGCCA
CTGCTTCATC AGCTTCTAAC CAAGAATCAC CAGATGCTTC TGCTACTGCA GTCGGGTTTA
AATCAATGAA CGAGTAAGCG AATTTTTCTT GCAGTTGATC TCTGACCAAA AGCTGACCGA
GGGCCTTTTC AGCGTCAAGA CATTCGTTGA AAAGTATAGT CGCGACGTCA TCTCAAGACT
GTTGCCCGGG CTCTCAATTC CAGGGTACAG CCAGGTATCC GGCTCTGATC CTCGTGGTCC
TCCTCCGGCT GGAGCGCCAC AAGGGAGCGA ACCATCTCCT GCGCGTCCTT CGGTCCCAAG
GACTGGTGAC CCACTTCTGG ACAATATAAA CAACATCAAC CCATCCGGCC GGAACCCAGC
TTCTCTCGGA CACCGCGACC TCGATCCTCT TGCGTCCCTC CGTCCACCTG GATCGTTCAA
TCCTAACAGA GATGGCGGTG GGATGCTGAT GGATTTTAAC CATCCCATGT TTGATTCTCG
CCGTGGTCGA GGTTTGGGCG ACCCGGATCT TGATGGGCCG GGTGGTTCAG TCCAGCCTCC
AGGATCGAGG TGGGATCCTG TAGGCCCCTC TCCTGATGGA GTGGGCGGTG GAGGGATCTT
CCCTGGAGTA GGCGGCAATC CCCTTGGGGG TGTGGGGAGA GGTGATAGGG ATAGGTGGGG
AGATGAGATG CCTCCTCCTG GGGAGTTTGG GCCTGATCTG GGAAGATTTG GAGGCGGTAA
TGGAATTGGT GGGCCGTTGG GTGGGGGTCG TGGGGGGGGA AGGTTCGGTG GTGGTGGTGG
ATTCGGGGGC GGAGGTGGTT TTGGAGGCAA TATGTACATG TAAACCTGTA ATCAGAGGGT
AGAGAGCATC GAGTGCTGT
 
Protein sequence
MSDPLNAASL LGLLPTLLPQ GTTSPLPLST DAIAALVHAI HTALQFRLIS PAPQPVDDNS 
KLEQPRSGGD NDDAMSEVTA VEQEDNSQPP IGRLAEGWNS RGEDSYSFQY RHDQSAMNFR
VRVGKMGNRV QIDAMAEDGE PHNLSVVRSE LVDSGLFPIP SSATASSASN QESPDASATA
VGFKSMNDVK TFVEKYSRDV ISRLLPGLSI PGYSQVSGSD PRGPPPAGAP QGSEPSPARP
SVPRTGDPLL DNINNINPSG RNPASLGHRD LDPLASLRPP GSFNPNRDGG GMLMDFNHPM
FDSRRGRGLG DPDLDGPGGS VQPPGSRWDP VGPSPDGVGG GGIFPGVGGN PLGGVGRGDR
DRWGDEMPPP GEFGPDLGRF GGGNGIGGPL GGGRGGGRFG GGGGFGGGGG FGGNMYM