Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNA00220 |
Symbol | |
ID | 3253507 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006670 |
Strand | + |
Start bp | 66911 |
End bp | 69614 |
Gene Length | 2704 bp |
Protein Length | 594 aa |
Translation table | |
GC content | 49% |
IMG OID | 638252356 |
Product | D-3-phosphoglycerate dehydrogenase, putative |
Protein accession | XP_566457 |
Protein GI | 58258089 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases [COG3386] Gluconolactonase |
TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.540783 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATCT CCCCCTCAAC CAAAGGCCAA AACGGCATCC TCAATGGTGT CGCAAATGGG CATCACATAA ATGGTACCAA CGGCACGTGT GGAGCTCATG TGAAGCCCAG AGTCTTCGCC CTGGATCCCC TTCATTCTGA AGCCTTGACA CTCGCTGAGA AACATTTTGA CCTGGTGCTT CCCGGCCATG AAGGGGAGAA CCAATGGCAA GAGGAAGCCC AAGGCTTGCT CGTTCGAGGT TCATACGTTA CGGCTGAAGA CTTGGAACGA GCCACTTCCA TGAAGGGCGG AAAATTGAAA TACATCTCCA AGCAGGGCAC CGGAGTGGAC AAGATCGATA TTGTGAATGC CAAAAAATTG GGAATTCCTG TCATGAACAC CCCCGGAGTG AACGTGAGTA AGCGGAAGTA TGACCAGTGA GGACCGTCCT TCTGACTCTG TGGCGTTCAG GCTCAGGCAG TGGCAGAACT TGCTTTTGGA ATGATGCTAT CGTGAGTGCT GAAACTCTCA TGCAGATAGA AGTTGAGAAC TGACCAATTC TTGTAGCTTG GCGCGGCAAA CCCCCTCGAT TGACCGTAAG ATACGGAAGG GTGCCTCGGT GACGAAGCTA GACGGATGGA AAGGGCAAAT GCTGTACGGA AAGACGCTGG GCGTTATCGG TGAGTATATC ATATCTGTAT CCATGGTTTC GTGCAGCTGG ATTAACAACC TCCTTCAGGT GGTGGTAATA TCGGCCTGCT CGTTGCGAAA ATGTTTGCTG GCGCATTCTC AGGTAAGATC GTACTTTACG ATCCATACCT CAAATCCCTA GACACCTGGC ACTCGGCCAT ACCAAATGCT TCAATCCACA AGGTCTCAGA GATAGATGAG CTCTTAACAA CAAGCGATAT TGTGACGATC CACGTGCCGC TAACTCCCTC GACGGAAAAT ATGATCTCGG CGCCCCAATT CAAGACCATG AAGCCCACTG CGATCCTGAT CAATACTGCC CGAGGCGGAA TTATCAATGA GGAAGATCTT TCTCAAGCGC TTCTTAACGA AGAAATCTTT GCGGCGGGTC TCGATGCTTT TACCGTGGAG CCCCCGAGCT TGGAGAGGTA TCCGGATTTG TGCGCTAGTG AGCGCGTATT GATGTTGTGC GTGCTACAGA AGCTGCTGTG AAGTCAATGC TAACCGCCTT CTTAGGCCGC ATATCGGAGC TGCATGCGAA TCTGTTCAGC AGGCTACGTG TCTCGCCATG GTTCAAAATC TCGTCAATGC CTTTGAAGGC AAGGTCGAGA ATCGGGTATA TTAAGAAGTG TTTAGGCTTC CGTTTGTACT ATAGGCTAGG ATGAAAATAG AGCTTGTTGA ACTATCAATG TATCTTTTCT CCCTCTCTCT CTCTAAATGT CTTCCTGCTG TCATTCGTTG CATCCGTTCG GAAACCTTTG CCGTACTGTG ACAGGACTTA GTGCGAGCAG TCCTTCTCCC GCTGTCCGCG GAACGGAACC CTCTCCGCGC TAGTCATCGG TTATTTGTTT ACGTTCGGCC CGAAGTTCAT GTACCAGTAC GCAGTGCGTG ACTTCTTCGA GACAGGTGAA ACAGCAGTCA TCAATATTTA TCTGATACAA ATATTCTTTA CTCAACAAAT TGACTACCAA AGACAGCATG TCAAACTTTT ATCCGCCACC TCGGTTAGTC ACTGCGAGGG CATTCTCCAG TGTTCCCACC ACGCTCTGGT CGACCAAGAC CACCGATTGG CTTCCCGGTG ATTTCATTCA TTTTCAGCCC TCGCATGTGC ACTTACTGAC CGAAATCTTG CGAAGGCTCA GGTGTACCTC CGGAAATCTT CCTTGAGGGT CCGACGACCG ATGCACAGGG GAATCTATTC GTGGTTGACG TCCCCTACGG TCGGATACTA CGATGTGAAC TGAAAAGTCG GGAGTGGGAA GTATTGGCAG ATTCCGACGG GGAACCAAAT GGACTTGCAC TGAATGACGA GGGGCAGCTG ATTGTTGCGG ATTATAAAAA TGGTCTGGTG AGTCAGGACA GGCGAAGTCC TCCTAGAATG GAGACACGGA GACGCAAAGC TCATTCTCTA GTAGATGAAA TGTGATCCGA AAACCGGAAA AATCGACCCA GTTCTGCTGA GAAGGAACAT GGAGCGTTTC AAAGGACTAA ATGATGTGAT TGTAGCCAGG AACGGTGACA TCTGTGGGTA ATTCCTCCCC TCCTCCGAAT GAAATTGGCT GATTAGCTTG CATTTCCGTT CAGATTTCAC GGATCAGGGC CAAACGGGCA TGACAGATCA GACGGGCTTG GTGTACCGCT TGTCTCCCAA CGGAAAACTG GATACGCTCT TATGGAATGG TATCAGCCCG AACGGACTCG TTTTGAATCC CGAGGAGACT GTGGGTCTTT TGAGCGATAA TGGCTAGGAT GGGAGTGCTG ATAAAGTATT GTTAGGTCAT GTACGTCGCA ATGACGAGGG ATAACAGCGT ATGGCGACTA CCACTGCACT CTGATGGTAC GACGACCAAA ACCGGAAAAT TCTGTACATC TCTTTTTTCT TTGCCTCACC ACATTGCCTA CTGATCACAT TCAGTCACTT CATTCGGGAT CGCGGGACCT GATGGGCTCA CAGTTGACGA AGAAGGTAAC CTGTTCATCT GCCATCCTTC ACTTCTGTCA ATATTCGTCG TTACGAAGCA CGGTATCCCT CTAG
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Protein sequence | MAISPSTKGQ NGILNGVANG HHINGTNGTC GAHVKPRVFA LDPLHSEALT LAEKHFDLVL PGHEGENQWQ EEAQGLLVRG SYVTAEDLER ATSMKGGKLK YISKQGTGVD KIDIVNAKKL GIPVMNTPGV NAQAVAELAF GMMLSLARQT PSIDRKIRKG ASVTKLDGWK GQMLYGKTLG VIGGGNIGLL VAKMFAGAFS GKIVLYDPYL KSLDTWHSAI PNASIHKVSE IDELLTTSDI VTIHVPLTPS TENMISAPQF KTMKPTAILI NTARGGIINE EDLSQALLNE EIFAAGLDAF TVEPPSLERY PDLCASRISE LHANLFSRLR VSPWFKISSM PLKARSRIGY IKKCLGFLRA VLLPLSAERN PLRASHRLFV YVRPEVHVPV RNSMSNFYPP PRLVTARAFS SVPTTLWSTK TTDWLPGSGV PPEIFLEGPT TDAQGNLFVV DVPYGRILRC ELKSREWEVL ADSDGEPNGL ALNDEGQLIV ADYKNGLMKC DPKTGKIDPV LLRRNMERFK GLNDVIVARN GDIYQTGLVY RLSPNGKLDT LLWNGISPNG LVLNPEETLT KKVTCSSAIL HFCQYSSLRS TVSL
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