Gene CNA00180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA00180 
Symbol 
ID3253522 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand
Start bp54488 
End bp57199 
Gene Length2712 bp 
Protein Length599 aa 
Translation table 
GC content48% 
IMG OID638252349 
Productcalcium ion transporter, putative 
Protein accessionXP_566450 
Protein GI58258075 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0387] Ca2+/H+ antiporter 
TIGRFAM ID[TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0287114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATCATAACAG AAAAACAAAC CATGTTTCAC CAAAGCAGGT CCTTTCTATT TTCGATCTAT 
ACAAGCTAAC CAACAATGTC GCTTCCCCGC CGCGTCTCCT TCCCTCCAGA CACCCAAGAG
GACCCTCCAG TTAGCGACTC TCCGTTGAGC TCACCGAAAC TCCCAGAATA TGACCCCCAA
TCATCCTCCA CCACGCCTAT TGTATCCAGC AACTTGCCTA CAGACACAGC CAATACTGCT
TCTGCTGGGC CACGCCGACG CCAACAACCA AGCAGACAAG TCACGCTAGA CGCACGTCCA
CCCTCCGCCG CCAGGCGTGG AACTACAGAA AGCGCTCGGA CGCAGCACAG CAGGGCAGGC
TCAAGACGGA CGTCGAATAG TTTAGATCCC AACCCAGGTC TGATAAGGCG AGTTACGACG
GTGCTGTTTA CGCCACCGAA GAAGATTGGT AAGGCACCGA CGTATTGGGG AAGTATAAAA
GCTGCGATAA CAAGCACTTG GTTGTGAGTC TGTTGGAAGC ATGACAAAGG AAGTATGACT
GACTGAACGG CGCAGAAATA TTTTGCTTGT GTTCATACCC ATCGGATGGG CGCTCTATCT
TGCAAAGCAT AGCGGCGGAA AGGACAGCAT CTCTGACACT GCTGTTTTCT GCTGTACCTT
TATCGCCATT ATCCCTTTGG CCGGTTTGCT TGGGTTTGCC ACCGAAGAGG CGGCTTTGCG
ACTAGGACAA ACACTTGGTG GTTTACTCAA CGCGACTTTG GGAAATGCCG TCGAGTTGAT
TGTTGCCATT CTTGCTCTTA TCAAGGTGAA TTGAGTTGCT AGCAGAAATT AAACAAGCTG
AATCCTCTCA GTGCGAACTG CAAGTCGTGC AATCATCACT TGTCGGCTCC ATCCTCAGTA
ACATCCTTCT TGTCCTCGGC ATGTGCTTCT TTGCAGGTGG TGTCCGATTC GCTGAGCAAG
CTATCAAATC TACCGCCGCC CAGCTCAACG CATCTTTATT GCTCATCGCG GTTATTGCCG
TGCTCATCCC ATCTGCTTTC CATTTTTCCA TCAGCTCGAG TACGAGTAAC ACGGATGCTA
GCGAGCTGGC CAATGGTGAG GGCGCTGATC TGTTGTCGAT GAGTCATGCT GTATCGATCT
TGCTTTTGAT TCTGTACCTC GGTTATTTGC TCTTCCAAAT GTGGACTCAC GCCGTAGGTC
GTTCGTTCGC CTCTATGTTA TCGCCAAGTG CTAAATGCCC CTTTCTAGAC TTATTATGTC
GATGACGCCG TAACAGGCTC GACTCAATAC CCGGAAGCGA TCACCAACGT CTCTGAGAAA
CTCAAGTTCC GCAATTTCCA CCGTAGGAAG CACGATGAAG AGGAAGGCTA CTCAACGGCG
ACGACGGTAT CGGAAGCTAC TGTTCCTCCT AGCGCGCGTC CCGGAGGTGG AGAGGTGCCA
GCGACTCATG GTCCTGGGAC CGTTGCTTCT GAGACTGGGA ATCGGGTTGA ACATGAAAGC
GAGGAAGAGG AAGAGGAGGA AGAGACGCCG CAAATGAATG TCGTCTGCAC TATCGTAAGC
ATTTCCCCAT CAAAAGTAGT ATGGAGTCGT ATTAACCGAT GACCGTAGGC TTTGATGGTC
ATTGACACCG TTCTTGTCGG TGTGACGGCC GAGTTTTTGG TTGACAGTAT TAATGGTATG
GTCGAAAGCA ATCCTAGTCT GTCTGCAGAA TGGGTCGGTT TAATCTTGCT TCCTATCGTG
AGTAATTCCT TGCCCACAGC AGTCCTCATT GAGCTTTCCT TCTTACTGAT GTGGAATGGT
TTGTAGGTTG GTAATGCAGC AGAGCACTTT ACAGCTGTGT CAGTGTCCGT GAAGGACAAA
CTCGACTTGT CAATCTCCGT TGCTGTATGT TCTCATCGAC TTTTTGATCT TCCCCGTTTG
CCTCTAACAC CACATATTTT CAGGTGGGAT CGTCGATCCA AATCGCCTTG TTTGTCATTC
CCGTCATCGA ACTGCTTGCT TGGACTATTG GCAAGCCCAT GACACTCCTT TTCGACCGTG
AGTCTTCATC TTTGAACCAA AAAAAAAAAA AAAAAAAAAA AAAAAACCAA CGCCGCTGTG
GAGACTGACT TGATCTTTTG GTTGCATTTC CATAGCTTAC GAGTCTATCG TACTTTTCTT
ATCTGTATTG ATCGTCAACC AAACTTTGGC GGACGGACGA TCAAAGTGAG TTCTCTATAG
ACACGCTTTA CGTTTTGTTC AGAGACTAGC ACTTGCTAAC CGACCAATTC ATGTAGTTGG
ATGGAAGGTA TGGTCTTGAT GATGCTGTAT ATCATCATCG CTGTATCGTT CTGGTACTAT
CCCGTACGTC TTGATCTTTT CCCCTCCTTT TTTGACTGTG CTGACAAGCG TGCGGTACGG
GCAATAGGGA TCAACCACCG CGACATTATT AGGTTGTCAA GATTCATCCA GCGTCACCGG
CTAAAAAAAA GAACTTCATT TTCATTTCGA TATTCAGCAT GTGTAGCATA AAAAGATCCA
TCTTACCCAT CATGTTCTTT AATGCCAACT TGTAATGTAC ATAAGACGGA AATGTTTATG
GAGATCTTCG GCCCCTTTTT ATCCTACCCT GAGCTTCTTT ATACCACTTT GGCTAAAACC
ATATACCGGA TCTCATTTAT GACTATTATT GACATCGCAA GTAGCACACA CGCCGGTGAG
ATAAGTAGAT TG
 
Protein sequence
MFHQNTQEDP PVSDSPLSSP KLPEYDPQSS STTPIVSSNL PTDTANTASA GPRRRQQPSR 
QVTLDARPPS AARRGTTESA RTQHSRAGSR RTSNSLDPNP GLIRRVTTVL FTPPKKIGKA
PTYWGSIKAA ITSTWLNILL VFIPIGWALY LAKHSGGKDS ISDTAVFCCT FIAIIPLAGL
LGFATEEAAL RLGQTLGGLL NATLGNAVEL IVAILALIKC ELQVVQSSLV GSILSNILLV
LGMCFFAGGV RFAEQAIKST AAQLNASLLL IAVIAVLIPS AFHFSISSST SNTDASELAN
GEGADLLSMS HAVSILLLIL YLGYLLFQMW THATYYVDDA VTGSTQYPEA ITNVSEKLKF
RNFHRRKHDE EEGYSTATTV SEATVPPSAR PGGGEVPATH GPGTVASETG NRVEHESEEE
EEEEETPQMN VVCTIALMVI DTVLVGVTAE FLVDSINGMV ESNPSLSAEW VGLILLPIVG
NAAEHFTAVS VSVKDKLDLS ISVAVGSSIQ IALFVIPVIE LLAWTIGKPM TLLFDPYESI
VLFLSVLIVN QTLADGRSNW MEGMVLMMLY IIIAVSFWYY PGSTTATLLG CQDSSSVTG