| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SEA0029 |
|---|
| Symbol | |
|---|
| ID | 3239155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006663 |
|---|
| Strand | + |
|---|
| Start bp | 22883 |
|---|
| End bp | 23899 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637622521 |
|---|
| Product | rlx protein, putative |
|---|
| Protein accession | YP_187558 |
|---|
| Protein GI | 57854749 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAATAG TGGCAACAAC TAAATTAAGT GCGACGAAAT CAACGTCACG TGCCATCAAT
TACGCTGAAA AACGGGCTGA AGAAAAAAGT GGCTTAAACT GCGACATAGA CTATGCCAAA
AGTAGTTTTA AAGTTACACG TGAACTCTAT GGTAAAACAG GGGGCAATGA AGGCCATGTT
ATTATTCAAT CATTTAAACC AGGCGAAGTA ACCCCAGAAC AATGTAATCA ATTAGGCTTA
GCACTAGCTG AAAAATTCGC ACCTAATCAT CAAGTCGCTG TCTATACACA CAACGATACG
GATCATGTTC ACAATCATAT TGTGATTAAT TCAATTGATC TTGAGACAGG GAAGAAATTT
AACAACAACA AACAAGCCTT ACGTGATTTA AGAGACTTTA ATGACAACGT ATGTCGCGAA
CATGGCTTAA GCGTGCCAGA AAAAGATACA GCACGCTTAC GTTATACACA AACAGAAAAA
GCGATTGCTG ACCCTAATAC AAAATCAACC GCTCAATATT CATGGAAAGA TGAAATACGT
GAAGCAATCG ACCAATCAAA AGCCACAAAT ATGGACGAAT TTAAAGACCA TTTAAGTCAA
TACGGCATTG AAATTGCACG AGTTACACCT AAGAGCATTA CCTATCGACA TCTAGCTGAA
GATAAAAAAG TCCGTGGCCG TCGATTAGGT GAAGATTATA ACAAGGGGGG CATAGAAGAT
GGCTTTGAAA GACAAATACA ACGACAACAG CAAGAACGAG AAGATGACAA CGACATCCAG
CCAAAACGAC CAACTTCAAA CCGTGATGAA CCAACTCAAC GAGATACAGG CGTCACTCAA
TCAGATTGGG ATAAATTCGC CCAAGACACA AATGAGCTTG AGCGTCGCCG ACAAGCTGCA
GAGTCAGCAA GACTTGCTGA TGAAAAGGCT CGAAGAGATC GAGAAGAGAG AGAACGAGCG
GAACAAGCGT CACGAACAAT TATTGACAAC GATAGAGACT ATGGCCTTGA ACTTTAA
|
|---|
| Protein sequence | MIIVATTKLS ATKSTSRAIN YAEKRAEEKS GLNCDIDYAK SSFKVTRELY GKTGGNEGHV
IIQSFKPGEV TPEQCNQLGL ALAEKFAPNH QVAVYTHNDT DHVHNHIVIN SIDLETGKKF
NNNKQALRDL RDFNDNVCRE HGLSVPEKDT ARLRYTQTEK AIADPNTKST AQYSWKDEIR
EAIDQSKATN MDEFKDHLSQ YGIEIARVTP KSITYRHLAE DKKVRGRRLG EDYNKGGIED
GFERQIQRQQ QEREDDNDIQ PKRPTSNRDE PTQRDTGVTQ SDWDKFAQDT NELERRRQAA
ESARLADEKA RRDREERERA EQASRTIIDN DRDYGLEL
|
|---|
| |