Gene SEA0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSEA0008 
Symbol 
ID3239135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_006663 
Strand
Start bp6361 
End bp7035 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content34% 
IMG OID637622500 
ProductIS431mec-like transposase 
Protein accessionYP_187537 
Protein GI57854760 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value0.297638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTATT TCAGATATAA ACAATTTAAC AAGGATGTTA TCACTGTAGC TGTTGGCTAC 
TATCTAAGAT ATGCATTGAG TTATCGTGAT ATATCTGAAA TATTAAGGGA ACGTGGTGTA
AACGTTCATC ATTCAACGGT CTACCGTTGG GTTCAAGAAT ATGCCCCAAT TTTATATCAA
ATTTGGAAGA AAAAGCATAA AAAAGCTTAT TACAAATGGC GTATTGATGA GACGTACATC
AAAATAAAAG GAAAATGGAG CTATTTATAT CGTGCCATTG ATGCAGAGGG ACATACATTA
GATATTTGGT TGCGTAAGCA ACGAGATAAT CATTCAGCAT ATGCGTTTAT CAAACGTCTC
ATTAAACAAT TTGGTAAACC TCAAAAGGTA ATTACAGATC AGGCACCTTC AACGAAGGTA
GCAATGGTTA AAGTAATTAA AGCTTTTAAA CTTAAACCTG ACTGCCATTG TACATCGAAA
TATCTGAATA ACCTCATTGA GCAAGATCAC CGTCATATTA AAGTAAGAAA GACAAGGTAT
CAAAGTATCA ATACAGCAAA GAATACTTTA AAAGGTATTG AGTGTATTTA CGCTCTATAT
AAAAAGAACC GCAGGTCTCT TCAGATCTAC GGATTTTCGC CATGCCACGA AATTAGCATC
ATGCTAGCAA GTTAA
 
Protein sequence
MNYFRYKQFN KDVITVAVGY YLRYALSYRD ISEILRERGV NVHHSTVYRW VQEYAPILYQ 
IWKKKHKKAY YKWRIDETYI KIKGKWSYLY RAIDAEGHTL DIWLRKQRDN HSAYAFIKRL
IKQFGKPQKV ITDQAPSTKV AMVKVIKAFK LKPDCHCTSK YLNNLIEQDH RHIKVRKTRY
QSINTAKNTL KGIECIYALY KKNRRSLQIY GFSPCHEISI MLAS