| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | lpl1572 |
|---|
| Symbol | rumA |
|---|
| ID | 3114505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Legionella pneumophila str. Lens |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006369 |
|---|
| Strand | - |
|---|
| Start bp | 1752838 |
|---|
| End bp | 1754172 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637583343 |
|---|
| Product | 23S rRNA 5-methyluridine methyltransferase |
|---|
| Protein accession | YP_126918 |
|---|
| Protein GI | 54294503 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
|---|
| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAAG TTAAGCCAAA ATTGAATTTA ACCTCACAAA CCGCTCGGAT CGTAAATTTA
AGCCATGATG GAAGGGGGAT AGCACGAATT AATGGCAAAG CAACTTTTAT TCAGGGAGCA
TTACCCGGTG AGGTGGTTGA ATTTCAGTAT ACACGGGTAA AAAAGGATTT TGATGAAGGT
AAATTATTAT CAATTGTCGA GCCTTCGACT CTCAGGGTTG AACCAAAATG CCCTCATTAT
CAAATGTGTG GAGGCTGTTC TTTGCAACAT ATGAGTGCCG AGGAACAAAT TCGTTTCAAA
CAATCCCATC TTTTGGATTT ACTATCTCGG TATGGCCATA CTGCACCTCA AACAGTATTG
TCACCTTTAA CAAGCCATCC TTGGAATTAT AGAAATAAAG CACGCTTAAG TACTCGCTTT
GTAGAAAAGA AACAAAGCAC CATGGTTGGA TTTAGAGAGA GGAATAATCC AAGGTTCATT
ACAGAAATAA ATCAATGTCC TATTCTTAAT TCAAAAATAG ATACTGATAT TGTCCATTTG
AGAAAATTAA TCGATACGAT GGAAGATAAG CAGTGTATCG CACAAATTGA AGTGGCTGCA
GGTGATAATG AAGTGGCGCT GATTTTCCGC AATCTAACCC CATTAACAGA GCAAGATGAG
TCGAAAATCA GGAAATTTGC GCAACAATTC CAATACAAGG TATTCCTGCA GCCAGGTGGA
CTTGATTCGG TTTTTTGTTT TTATCCTTCA GATGCTCATG CTTATTTGAG TTATGAGCTG
CCCGATTATC AAATAACTTT TCAATTTCAT CCCAACGATT TTACTCAGGT AAACGCCGAG
TTAAATAGAA AGATGGTAAA GCAGGCAATT CAGTTAATGG AATTAAAAAA TTCTGATATC
GTGCTAGACT TATTTTGTGG ACTGGGTAAT TTTTCGCTTC CCATGGCTAA ACATTGCTCT
CGAGTTATCG GTGTCGAAGG CAATAGGAAC ATGGTTGAAA GAGCCTATAT GAATGCCAAG
TCTAATCATA TTACCAATGT GGATTTTTAT GCTGCTAATC TTGATGATGT GATGGAAGTT
AGGAATCTGG TTAATACGTC TTTTAGCAAG GTTTTAATCG ATCCTCCCCG GTCTGGTGCG
CTTGAAATTG TAAAACAAAT TGATTCAATT GATCCCGAGC GTATAGTATA TGTATCTTGT
AACCCGATAA CATTAGCTCG AGATACAGAT ATATTGGTTA ATCAAAAAGG TTACGTTTTG
ATAACAGCTG GGGTAATGGA TATGTTTCCT CATACAGCGC ATGTCGAGTC TATTGCCTTG
TTTCAAAAAG GATAA
|
|---|
| Protein sequence | MRKVKPKLNL TSQTARIVNL SHDGRGIARI NGKATFIQGA LPGEVVEFQY TRVKKDFDEG
KLLSIVEPST LRVEPKCPHY QMCGGCSLQH MSAEEQIRFK QSHLLDLLSR YGHTAPQTVL
SPLTSHPWNY RNKARLSTRF VEKKQSTMVG FRERNNPRFI TEINQCPILN SKIDTDIVHL
RKLIDTMEDK QCIAQIEVAA GDNEVALIFR NLTPLTEQDE SKIRKFAQQF QYKVFLQPGG
LDSVFCFYPS DAHAYLSYEL PDYQITFQFH PNDFTQVNAE LNRKMVKQAI QLMELKNSDI
VLDLFCGLGN FSLPMAKHCS RVIGVEGNRN MVERAYMNAK SNHITNVDFY AANLDDVMEV
RNLVNTSFSK VLIDPPRSGA LEIVKQIDSI DPERIVYVSC NPITLARDTD ILVNQKGYVL
ITAGVMDMFP HTAHVESIAL FQKG
|
|---|
| |