Gene lpl1509 details

Gene Information

• Locus tag: lpl1509
• Symbol: lssD
• ID: 3116244
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Lens
• Kingdom: Bacteria
• Replicon accession: NC_006369
• Strand: -
• Start bp: 1680159
• End bp: 1681295
• Gene Length: 1137 bp
• Protein Length: 378 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 637583280
• Product: secretion system protein D
• Protein accession: YP_126855
• Protein GI: 54294440
• COG category: [V] Defense mechanisms
• COG ID: [COG1566] Multidrug resistance efflux pump
• TIGRFAM ID: [TIGR01843] type I secretion membrane fusion protein, HlyD family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA CTCACAGTTC AAAAATATTC ACCCATGTTA TTTTATGGGC TTCTTTGCTT 
TTTTTTATTT CAGCAATTAT CTGGGCCAAT TATGCCATTC TTGATGAAGT AACTACAGGA 
CAAGGAAAAG TCATTCCCTC CAGTGAGGTG CAGGTCATAC AGAATCTTGA AGGCGGGATC 
ATTCAGAATA TTTTTGTCAA AGAGGGACAA ATAGTTAAAA AAGATCAAAT TTTAATGCAA 
ATTGATAATA CTCGATTTAT GTCCAGCTAT GCCGAAGCAG AGAAAAAAAT TGATGCGCTG 
GAAATAGAAA TTATACGGCT TAATGCTGAA ATCAGTAATA CAAAACCTGT GTTTCCAGAA 
AAACTTACCA AAACCTATCC TCATCTTGTG CAGGATCAAT TGTCTCTATA TGAATCACGT 
ATGAGAGAGT TGAATCAATT GGAAAAGTCT CTGGAGTTGG CGCAAAAAGA ATTGAATTTA 
ACTCGCCCAC TATTAAAAGG AGGCTCTGTT TCAGAGGTGG AAGTCATTCG TCTGGAAAGA 
ACAGTAAGTG AAATTAGAGG GAACATTGAG AAATTCAAAT CAGAAGAATT GGATAGATTG 
AATAAAGCCC GATCAGAGTT ATTTGCGCTG ATTGAAGCCA ATAAGGCAGA CAAAGATCGT 
TTAACACGAA CCACAGTTCG TTCCCCAGTT TATGGTATTG TAAAACAAAT TAAAACGAAA 
ACAATTGGCG GTGTAGTTCA GCCTGGTAAT GATTTGCTTG AAATTGTACC GCTTGATGAT 
ACTTTATTAA TTGAAGCAAA GATACGCCCT TCTGATATTG GTTTTATACA CCCAGGCCAA 
AAAGCGATGG TTAAAATTAC TGCTTATGAC TTTTCTATCT ATGGTGGATT GGAGGGTGTT 
GTAGAGCATA TTAGTGCCGA TACTATTATT GATGAGAAAA CAGATAAAAA AGAAGAAAGC 
TACTATATAG TGAAAGTGCG AACAGAGAAA AACTATTTGG GAACTGAAAA AAAACCATTG 
CCTATCATTC CAGGTATGCA AGCTACTGTT GATATACTTA CAGGTCAAAA ATCAGTCCTT 
CAATACCTCT TGAAACCTAT AATTAAAGCT AAGCAATCCG CACTTAGAGA ACGTTGA 

 

Protein sequence

MKKTHSSKIF THVILWASLL FFISAIIWAN YAILDEVTTG QGKVIPSSEV QVIQNLEGGI 
IQNIFVKEGQ IVKKDQILMQ IDNTRFMSSY AEAEKKIDAL EIEIIRLNAE ISNTKPVFPE 
KLTKTYPHLV QDQLSLYESR MRELNQLEKS LELAQKELNL TRPLLKGGSV SEVEVIRLER 
TVSEIRGNIE KFKSEELDRL NKARSELFAL IEANKADKDR LTRTTVRSPV YGIVKQIKTK 
TIGGVVQPGN DLLEIVPLDD TLLIEAKIRP SDIGFIHPGQ KAMVKITAYD FSIYGGLEGV 
VEHISADTII DEKTDKKEES YYIVKVRTEK NYLGTEKKPL PIIPGMQATV DILTGQKSVL 
QYLLKPIIKA KQSALRER