Gene lpl1286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus taglpl1286 
SymbolrluD 
ID3113393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLegionella pneumophila str. Lens 
KingdomBacteria 
Replicon accessionNC_006369 
Strand- 
Start bp1436665 
End bp1437630 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content39% 
IMG OID637583059 
Productribosomal large subunit pseudouridine synthase D (pseudouridylate synthase) (Uracil hydrolyase) 
Protein accessionYP_126636 
Protein GI54294221 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0564] Pseudouridylate synthases, 23S RNA-specific 
TIGRFAM ID[TIGR00005] pseudouridine synthase, RluA family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAGC ATATCCAGCA ACAATTATCA GTACCTCGCG AATTACATAA CCAACGAGTA 
GATAGCGTGC TTGCCAGGCT GCTTCCTGAG TATTCACGCT CTCTTATCTG TAACTGGATT 
AAAACAGGTG CTGTTACCCT TAATAATCTG CCTTGCAAAC CCAAAGATAA AGCGCTGGGC 
GGTGATTTAA TTACGATTAA TGTTGACTAT ACAATAGATA ATACAGATTT TAACTTGTGT 
AAACCTGAGA ACATTCCAAT TCAGATAGTC TATGAAGACA GTGAAGTAAT TGTTGTTAAC 
AAGCCAGCCA GTCTTGTTGT ACATCCGGGT GCGGGAAACA AGGAACATAC ACTAGTTAAT 
GCGCTGCTTC ATCATTGTCC CGAGTTGCAA CTACTTCCTC GTGCTGGAAT TATTCACAGA 
TTGGATAAAG ATACCACTGG TCTGCTGATA GTGGCTAAAA ACCTGATTAG CCATACTTAT 
CTCATCAGGC AAATGCAAAA TCGCGAAATT AAGCGCCACT ATCTGACATT AGTTCATGGT 
TATGTCATTT CTGGTGGAAC AATAGATACA GGTTTTGGCA GGCATCCCAA AAATAGACTA 
AAGATGGCTG TAACTGACTT TGGGCGTCAA GCTGTTACCC ATTATAATAT CAATAAGCAT 
TATAAAGACT TTACCTTACT GAATGTTAGC TTAATGACAG GACGCACTCA TCAGATAAGA 
GTGCATATGA ACTACATTAA CCACCCGGTT GTAGGAGATC AACTGTATGG AGGAAGAATG 
AAGTTTCCTC CTAATGCTGA TGAGGCAATA CTCTCAGTTT TAAAGCAATT TAAAAGACAA 
GCACTTCATG CCTGTTCCAT TTCATTTTGT CATCCTGTAA AAAATACAGA AATAACACTG 
AATGCATTAT TACCCGATGA TTTCGAACTC TTGTTAAACA CTCTGGATCA ACACGATGAA 
AAATAG
 
Protein sequence
MIEHIQQQLS VPRELHNQRV DSVLARLLPE YSRSLICNWI KTGAVTLNNL PCKPKDKALG 
GDLITINVDY TIDNTDFNLC KPENIPIQIV YEDSEVIVVN KPASLVVHPG AGNKEHTLVN 
ALLHHCPELQ LLPRAGIIHR LDKDTTGLLI VAKNLISHTY LIRQMQNREI KRHYLTLVHG 
YVISGGTIDT GFGRHPKNRL KMAVTDFGRQ AVTHYNINKH YKDFTLLNVS LMTGRTHQIR 
VHMNYINHPV VGDQLYGGRM KFPPNADEAI LSVLKQFKRQ ALHACSISFC HPVKNTEITL 
NALLPDDFEL LLNTLDQHDE K