| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | lpl0721 |
|---|
| Symbol | rimO |
|---|
| ID | 3115895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Legionella pneumophila str. Lens |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006369 |
|---|
| Strand | - |
|---|
| Start bp | 808492 |
|---|
| End bp | 809799 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637582500 |
|---|
| Product | ribosomal protein S12 methylthiotransferase |
|---|
| Protein accession | YP_126083 |
|---|
| Protein GI | 54293668 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0621] 2-methylthioadenine synthetase |
|---|
| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCATA AAGTAGGATT TGTAAGTTTA GGATGCCCCA AAGCACTGGT CGATTCAGAG
CGCATCATTA CTCAGCTTAA AGCACAAGGC TATGAATTGG TTCCCACTTA TGAGGATGCT
GGAGTCGTCG TAATTAATAC GTGCGGCTTC ATTGACAGCG CTGTCCAGGA ATCACTGGAT
ACGATTAAAG AAGCGATGGC TGAAAACGGG CGAGTAATCG TTACAGGTTG TTTAGGAGCT
AAAGCGGACG TAATTAAAAA TGCCTGTCCT GATGTCCTGC ATATCAGTGG TGCTCATGCT
TACGAAGAAG TAGTCAATGC GGTACACCAA CACTTACCGC CTCCTGCAGA CCCCTTTACA
CAACTGATTC CCCCACAGGG AATAAAACTC ACACCTCGGC ATTATGCTTA TTTAAAAATA
TCAGAAGGAT GCAACCAAAA ATGCACTTTT TGCATTATCC CTACGATGAG AGGAAAATTG
CAAAGCTATC CAATGGCCCA AATTCTTACT GAAGCTAAAA AATTAAAACA AGCCGGAGTT
AAAGAATTAC TGGTTATCTC ACAAGACACC AGTGCTTATG GCGTGGATAC ACGTTATCAG
CAAGTCGAAT GGCAAGGAAA AACAGTCAAT ACTCGTTTTT ACGATCTATG CGAGCAATTA
GGCGAATTAG GAATTTGGGT GAGACTCCAT TATGTCTATC CCTACCCCCA TGTTGATGAT
ATTGTTCCTC TAATGCGCGA TGGCCTGATT TTGCCTTACC TGGACATACC ATTACAACAT
GCCAATTCAC GCATATTAAA AGCAATGAAA AGACCTGCCA GCAGTGAAAA TACCTTATTG
CGAATTGCTT CATGGAGAGA AATTTGCCCT GACATTACGT TACGCTCCAC ATTCATTGTA
GGTTTCCCTG GTGAAACAGA AGAGGAGTTT TCCGAATTAC TAGCCTTCCT TAAAGAGGCA
CAACTAGACA GAGTCGGTTG TTTCAAATAC TCCCCTGTTG AGGGAGCCAA AGCAAATGAT
TTGGATAATC CTGTTTCGGA AGATATTAAA GAAGAGCGTT ATCATCGTTT TATGCAAGTA
CAAGCAGAAA TTAGCCGTAA TAAATTAAAA AATAAAATTG GCAGTACTCA AACCGTTTTA
ATTGATGAGA TAACCGAAGA TCAAATCATA GCTCGTAGTA AAAGCGATGC TCCTGAAATC
GATGGTCTTG TTTATTTGCC TAAAATATCC GGGATTACTG TAGGATCTTT CGCTGAGGTT
GTTATCACTG ACAGCGACGA TTACGATTTA TATGCTTCTT TAGTCTGA
|
|---|
| Protein sequence | MNHKVGFVSL GCPKALVDSE RIITQLKAQG YELVPTYEDA GVVVINTCGF IDSAVQESLD
TIKEAMAENG RVIVTGCLGA KADVIKNACP DVLHISGAHA YEEVVNAVHQ HLPPPADPFT
QLIPPQGIKL TPRHYAYLKI SEGCNQKCTF CIIPTMRGKL QSYPMAQILT EAKKLKQAGV
KELLVISQDT SAYGVDTRYQ QVEWQGKTVN TRFYDLCEQL GELGIWVRLH YVYPYPHVDD
IVPLMRDGLI LPYLDIPLQH ANSRILKAMK RPASSENTLL RIASWREICP DITLRSTFIV
GFPGETEEEF SELLAFLKEA QLDRVGCFKY SPVEGAKAND LDNPVSEDIK EERYHRFMQV
QAEISRNKLK NKIGSTQTVL IDEITEDQII ARSKSDAPEI DGLVYLPKIS GITVGSFAEV
VITDSDDYDL YASLV
|
|---|
| |