Gene lpl0386 details

Gene Information

• Locus tag: lpl0386
• Symbol: rpsE
• ID: 3115170
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Lens
• Kingdom: Bacteria
• Replicon accession: NC_006369
• Strand: +
• Start bp: 439822
• End bp: 440328
• Gene Length: 507 bp
• Protein Length: 168 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637582163
• Product: 30S ribosomal protein S5
• Protein accession: YP_125753
• Protein GI: 54293338
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCATTCG ATGAATTACC CAAGTCAGAT GGATACCAAG AAAAATTGGT ATCGGTAACT 
CGTACGGCTA AAGTTGTAAA GGGTGGACGA GTTTTTGGTT TTGCTGTTTT AGTAGTTGTA 
GGTGACGGAA AGGGTAAAGT AGGTTTTGGA CGAGGTAAAG CAAGAGAGGT TCCAATAGCA 
ATTCAAAAAG CTATGGACCA AGCCAAGAAA AATATGGTTT ACATTCCTCT TTCAGGTACT 
ACAATATTCC ACGAAATCAC ATGGAACTAC GGAGCTTCCA AGGTGTTTAT GAAGCCAGCA 
AGTGAAGGTA CAGGAATTAT TGCTGGAGGC GCTATGCGTG CCGTTTTGGA AGTGTTGGGT 
GTGCAAAATA TTCTTGCAAA AAGCATTGGT TCTACCAATC CAAGTAACAT TGTTCGTGCC 
ACTATTGGTG CATTGACACA CATTGGTACG CCGGACTATG TAGCAGCCAA ACGTGGAAAA 
ACAGTTGAAG AAGTAATGGC AGGCTAA 

 

Protein sequence

MSFDELPKSD GYQEKLVSVT RTAKVVKGGR VFGFAVLVVV GDGKGKVGFG RGKAREVPIA 
IQKAMDQAKK NMVYIPLSGT TIFHEITWNY GASKVFMKPA SEGTGIIAGG AMRAVLEVLG 
VQNILAKSIG STNPSNIVRA TIGALTHIGT PDYVAAKRGK TVEEVMAG