Gene lpp3002 details

Gene Information

• Locus tag: lpp3002
• Symbol: rho
• ID: 3117644
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Paris
• Kingdom: Bacteria
• Replicon accession: NC_006368
• Strand: -
• Start bp: 3419513
• End bp: 3420775
• Gene Length: 1263 bp
• Protein Length: 420 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637581703
• Product: transcription termination factor Rho
• Protein accession: YP_125304
• Protein GI: 54298935
• COG category: [K] Transcription
• COG ID: [COG1158] Transcription termination factor
• TIGRFAM ID: [TIGR00767] transcription termination factor Rho

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCTTA GTGAACTTAA GCAATTACCT ATTGCCGATC TCGTTAATAT CGCTCAAGAG 
ATGGGTGTGG AAAATACCTC CCGTATGCGC AAGCAAGACA TCATTTTCGC CATCCTTAAA 
GCTCATGCTT TAAAAGGGGA AGACATCCAT GGCGATGGTG TTTTGGAAGT TTTGACTGAT 
GGTTTTGGTT TCTTGCGTTC CGCTGATGGC TCCTATCTGG CAGGCCCTGA TGACATTTAC 
GTCTCTCCCA GTCAAATCAG ACGTTTCGGT CTTCGTTCGG GGGATACTAT TTCTGGTAAA 
ATCCGCCCCC CCAAAGACAG CGAACGCTAT TTTGCTTTAT TAAAAGTTGA TCAAATTAAC 
TACGATACAC CGGATAGCGC AAAGCGTAAG ATTTTATTTG AAAACTTAAC TCCCTTGTTT 
GCTACCGAGC GTCTGGTTAT GGAGCAAGGT AATGGCAGCA CAGAAGATCT CACGGCAAGA 
GTAGTTGATT TATGCGCTCC TTTCGGCCGT GGACAGCGTG GTTTGATCGT GTCACCTCCG 
AAAGCAGGTA AGACATTAAT GTTGCAAAAC ATTGCTCGCT CTATAGAAAA AAATTATCCT 
GAATGTTATC TCATTGTTTT GCTGATTGAT GAACGTCCTG AAGAAGTAAC GGAAATGCAG 
CGTTCTGTCA AAGGGGAAGT TGTTGCGAGT ACTTTTGACG AGCCCGCCAA TCGCCATGTT 
CAGGTTGCCG AAATGGTAAT AGAAAAAGCA AAACGTCTGG TTGAGCATAA ACGTGATGTG 
GTTATTCTGC TGGATTCGAT CACTCGCCTG GCCAGAGCTT ACAATACGGT TGTACCGGCA 
TCAGGTAAAG TACTGACTGG TGGTGTTGAT GCGAATGCCC TGCAAAGACC CAAGAGATTG 
TATGGTGCGG CACGTAACAT AGAAGAGGGC GGCAGTTTAA CTATTATTGC AACGGCTCTG 
GTAGACACGG GTTCCAAAAT GGACGAAGTG ATTTACGAAG AGTTCAAAGG TACAGGTAAC 
ATGGAAATCC ACTTGAGTCG TAATATTGCC GAGAGAAGGG TTTTCCCCGC GATTAACATT 
AATCGCTCTG GTACTCGCCG TGAAGATCTC CTGTTGAGCC CCGAAGAATT ACAGCGCACC 
TGGATATTGC GTAAAATCCT GCAATCCATG GATGAATGCG ATGCGATTGA ATTCTTATTG 
GAACGCATGA AGAATCATAA GACAAATGCC GAATTCTTTG ATGCAATGAA GCGTCAGGAA 
TAA 

 

Protein sequence

MNLSELKQLP IADLVNIAQE MGVENTSRMR KQDIIFAILK AHALKGEDIH GDGVLEVLTD 
GFGFLRSADG SYLAGPDDIY VSPSQIRRFG LRSGDTISGK IRPPKDSERY FALLKVDQIN 
YDTPDSAKRK ILFENLTPLF ATERLVMEQG NGSTEDLTAR VVDLCAPFGR GQRGLIVSPP 
KAGKTLMLQN IARSIEKNYP ECYLIVLLID ERPEEVTEMQ RSVKGEVVAS TFDEPANRHV 
QVAEMVIEKA KRLVEHKRDV VILLDSITRL ARAYNTVVPA SGKVLTGGVD ANALQRPKRL 
YGAARNIEEG GSLTIIATAL VDTGSKMDEV IYEEFKGTGN MEIHLSRNIA ERRVFPAINI 
NRSGTRREDL LLSPEELQRT WILRKILQSM DECDAIEFLL ERMKNHKTNA EFFDAMKRQE