Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | lpp1474 |
Symbol | lssD |
ID | 3118480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Legionella pneumophila str. Paris |
Kingdom | Bacteria |
Replicon accession | NC_006368 |
Strand | + |
Start bp | 1644803 |
End bp | 1645939 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637580169 |
Product | secretion system protein D |
Protein accession | YP_123798 |
Protein GI | 54297429 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA CTCACAGCTC AAAAACCTTT ACCCATATTA TTTTATGGAC TTCCTTGCTT TTTTTTATTG TGGCAATTAT TTGGGCTAAT TATGCCATTC TTGATGAAGT AACTACAGGA CAAGGGAAAG TAATTCCCTC TAGTGAGGTT CAGGTCATAC AGAATCTTGA AGGCGGGATT ATTCAGAATA TTTTTGTCAA AGAAGGGCAA ATAGTTAAAA AAGATCAAAT TTTAATGCAA ATCGATAATA CTCGGTTTAT GGCCAGCTAC GCCGAAGCAG AGAAAAAAAT TGATGCATTG GAAATAGAAA TTATAAGGCT TAATGCTGAA ATTAGTGATA CAAAACCTGT GTTTCCAGAT AAATTTATCA AAACCTATCC TCATCTTGTG CAGGATCAGT TGTCTCTGTA TGAATCACGG ATGAGAGAGT TGAATCAACT GAAAAAATCC CTAGAGTTGG CGCAAAAAGA ATTGGATTTA ACTCGCCCAT TATTAAAGGG TGGATCCGTT TCAGAAGTAG AGGTTATTCG TCTGGAAAGA TCAGTAAGTG AAATTAAAGG AAACATCGAG AAGTTCAAAT CAGAAGAACT GGATAAATTG AATAAAGCCA GAACAGAGTT GTTTGCGCTG GTTGAGGCGA ATAAAGCGGA TAAAGATCGT TTAACAAGGA CCACAGTTCG TTCTCCAGTT TATGGTATTG TAAAACAAAT TAAGACGACA ACGATTGGTG GTGTAGTTCA ACCAGGTAGT GATTTACTTG AGATAGTCCC GCTTGATGAT ACTTTATTAA TTGAAGCAAA AATACGCCCT TCTGATATTG GTTTTATACA TCCAGGTCAA AAAGCGATGG TTAAAATTAC TGCTTATGAC TTTTCTATCT ATGGTGGATT GGAGGGTGTT GTAGAGCATA TTAGTGCCGA TACTATTATT GATGAGAAAA CAGATAAAAA AGAAGAAAGC TATTATATAG TAAAAGTGCG AACAGAGAAA AACTATTTGG GAACCGAAAA AAAACCATTG CCTATCATTC CAGGTATGCA AGCTACAGTT GATATACTTA CAGGTCAAAA ATCTGTTCTT CAATACCTTT TGAAGCCCAT ACTTAAGGCT AAGCAATCAG CACTTAGAGA GCGTTAA
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Protein sequence | MKKTHSSKTF THIILWTSLL FFIVAIIWAN YAILDEVTTG QGKVIPSSEV QVIQNLEGGI IQNIFVKEGQ IVKKDQILMQ IDNTRFMASY AEAEKKIDAL EIEIIRLNAE ISDTKPVFPD KFIKTYPHLV QDQLSLYESR MRELNQLKKS LELAQKELDL TRPLLKGGSV SEVEVIRLER SVSEIKGNIE KFKSEELDKL NKARTELFAL VEANKADKDR LTRTTVRSPV YGIVKQIKTT TIGGVVQPGS DLLEIVPLDD TLLIEAKIRP SDIGFIHPGQ KAMVKITAYD FSIYGGLEGV VEHISADTII DEKTDKKEES YYIVKVRTEK NYLGTEKKPL PIIPGMQATV DILTGQKSVL QYLLKPILKA KQSALRER
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