| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | lpp1412 |
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| Symbol | rumA |
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| ID | 3117433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Legionella pneumophila str. Paris |
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| Kingdom | Bacteria |
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| Replicon accession | NC_006368 |
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| Strand | + |
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| Start bp | 1569921 |
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| End bp | 1571255 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637580107 |
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| Product | 23S rRNA 5-methyluridine methyltransferase |
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| Protein accession | YP_123736 |
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| Protein GI | 54297367 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAAG TTAAGCCAAA ATTGAATTTA ACCTCACAAA CCGCTCGGAT CGTAAATTTA
AGCCATGATG GGAGGGGGAT AGCACGAGTT AATGGCAAAG CAACTTTTAT TCAGGGAGCA
TTACCTGGTG AGGTGGTTGA ATTTCAGTAT ACACGGGTAA AAAAGGATTT TGATGAAGGT
AAATTATTAT CAATTGTTGA GCCCTCTACT CTCAGGGTTG AACCAAAATG CCCTCATTAT
CAAATGTGTG GGGGCTGTTC TTTGCAACAT ATGAGTGCCG AGGAACAAAT TCGTTTCAAA
CAATCCCATC TTTTGGATTT ACTATCCCGG TATGGCCATA CTGAACCTCA ATCAGTGTTG
TCGCCTTTAA CAAGCCATCA TTGGAATTAT AGAAATAAAG CGCGCTTAAG TACTCGCTTT
GTAGAAAAGA AACAAAGCAC CATGGTTGGA TTTAGAGAGA GGAATAATCC AAGGTTCATT
ACAGAAATAA ATCAATGTCC TATTCTTAAT TCAAAAATAG ATACTGATAT TGTCCATTTG
AGAAAATTAA TCGATACGAT GGAAGATAAG CACTGTATCG CACAAATTGA AGTGGCTGCA
GGTGATAATG AAGTGGCGCT GATTTTCCGC AATCTATCTC CATTAACAGA GCAAGATGAG
TTGAAAATCA GGGAATTTGC GCAACAATTC CAATACAAGG TATTCCTGCA GCCAGGTGGA
CTTGATTCGG TTTTTTGTTT TTATCCTTCA GATGCTCATG CTTATTTGAG TTATGAGCTG
CCTGATTATC AAATAACTTT TCAATTTCAT CCCAACGATT TTACTCAGGT AAACGCCGAG
TTAAACAGAA AGATGGTAAC GCAGGCAATT CAGTTAATGG AATTAAAAAA TTCTGATATC
GTGCTAGACT TATTTTGTGG ACTGGGTAAT TTTTCGCTTC CCATGGCTAA ACATTGCTCT
CGAGTTATCG GTGTCGAAGG CAATAAGAAC ATGGTTGAAA GAGCCTATAT GAATGCCAAG
TCTAATCATA TTACCAATGT GGATTTTTAT GCCGCTAATC TTGATGATGT GATGGAAGTT
AGGAGTCTGG TTAATACGTC TTTTAGCAAG GTTTTAATCG ATCCTCCCCG GTCTGGTGCG
CTTGAAATTG TAAAACAAAT TGATTCAATT GATCCCGAGC GTATAGTATA TGTATCTTGT
AACCCGATAA CATTAGCTCG AGATACAGAT ATATTGGTTA ATCAAAAAGG TTACGTTTTG
ATAACAGCTG GGGTAATGGA TATGTTTCCT CATACAGCGC ATGTCGAGTC TATTGCCTTG
TTTCAAAAAG GATAA
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| Protein sequence | MRKVKPKLNL TSQTARIVNL SHDGRGIARV NGKATFIQGA LPGEVVEFQY TRVKKDFDEG
KLLSIVEPST LRVEPKCPHY QMCGGCSLQH MSAEEQIRFK QSHLLDLLSR YGHTEPQSVL
SPLTSHHWNY RNKARLSTRF VEKKQSTMVG FRERNNPRFI TEINQCPILN SKIDTDIVHL
RKLIDTMEDK HCIAQIEVAA GDNEVALIFR NLSPLTEQDE LKIREFAQQF QYKVFLQPGG
LDSVFCFYPS DAHAYLSYEL PDYQITFQFH PNDFTQVNAE LNRKMVTQAI QLMELKNSDI
VLDLFCGLGN FSLPMAKHCS RVIGVEGNKN MVERAYMNAK SNHITNVDFY AANLDDVMEV
RSLVNTSFSK VLIDPPRSGA LEIVKQIDSI DPERIVYVSC NPITLARDTD ILVNQKGYVL
ITAGVMDMFP HTAHVESIAL FQKG
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