Gene lpp1378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus taglpp1378 
Symbol 
ID3116658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLegionella pneumophila str. Paris 
KingdomBacteria 
Replicon accessionNC_006368 
Strand+ 
Start bp1535338 
End bp1536507 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content39% 
IMG OID637580073 
Producttetratricopeptide repeat protein 
Protein accessionYP_123702 
Protein GI54297333 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2956] Predicted N-acetylglucosaminyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAATT TATGGCCACT GTTGTTACCT GCTGCCGCAT GGTCTGGTTG GTGGCTGGCT 
AACCGCAGTA ATTCCAATAA AGATGCTCAT GTCCACAATC GCTTATCGCG AGAATATGTA 
GTTGGACTTA ATTATTTATT AAATGAACAA TCTGATAAAG CGGTTGATGT ATTTATCAAG 
CTTCTAGAAG TTGATAGCGA TACAGTAGAA ACCCATCTTG CACTGGGTAG CTTGTTCAGG 
CGTAGAGGGG AAGTAGACAG GGCTATTCGT ATTCATCAAA ATTTAATCGC CAGACCTCAA 
TTAAGTATTC AACAGCGAAA GGAAGCCCTA ATGGCTTTAG GGCAAGATTA TATGAGTGCT 
GGAGTATTTG ACCGAGCTGA ACGTATATTC CTTGAGGTTG TTGAGTTGGG CGGGAGTAGA 
GATACAAGCA GTCTTCAAGG ATTATTAGCA ATTTACCAAC AAGAAAAAGC TTGGGAAAAA 
GCTTTAGATA TTATTAAGAA ACTGGAAATT TCTACCGGAG CCAGTTTCCA CAATCAAGCA 
GCTCATTATT ACTGTGAAAT GGCTAGTCAA GCGCTTAAAA TCAATGCAAT GGATAGAGCA 
ATTTATTGTA TAAAGCAAGC AATGAATGTT GATCCGGAGT CCGTAAGAGC CAGTTTGATG 
AATGCTACAA TTGAAATAAA AGAAGGCCGC TATAAACAGG CTATTCGATC TTTAAAAAGA 
GTGCCGCAGC AGGATGCAGA GTTTTTAACC GAAATCATTG AACCATTAGT TCTTTGTCAT 
AAAGAGCTGG ACTCCATGCC GGATTGTATT CACTATCTTG AGCAAACTTT GGAAAAACAT 
CCGCGAGCCT CTGTAATTTT CGTTATTGCT GATTATTTGC GACAAAATAA GGGTATGGAT 
ATTGCAATTG ACTTTGTGGC TGATAATTTA AGCAAACATC CATCGATAAG AGGTTTGAAT 
CGTTTGATTT ATTGGCACTT GGAGTCTGCT CATGGAAAAG TACGTGAAAA ACTGCAAATG 
CTTTATGATA TTACTAGCAA GTTTTTAGAT AATAAGCCCA TATATCGATG TGGGCATTGT 
GGTTTTGGTG GTAAACATTT ACATTGGCAT TGCCCAAGTT GTAAACAGTG GGGTAGAATG 
AAGCCTATCC ATGGTTTGGA AGGGGATTAA
 
Protein sequence
MINLWPLLLP AAAWSGWWLA NRSNSNKDAH VHNRLSREYV VGLNYLLNEQ SDKAVDVFIK 
LLEVDSDTVE THLALGSLFR RRGEVDRAIR IHQNLIARPQ LSIQQRKEAL MALGQDYMSA 
GVFDRAERIF LEVVELGGSR DTSSLQGLLA IYQQEKAWEK ALDIIKKLEI STGASFHNQA 
AHYYCEMASQ ALKINAMDRA IYCIKQAMNV DPESVRASLM NATIEIKEGR YKQAIRSLKR 
VPQQDAEFLT EIIEPLVLCH KELDSMPDCI HYLEQTLEKH PRASVIFVIA DYLRQNKGMD 
IAIDFVADNL SKHPSIRGLN RLIYWHLESA HGKVREKLQM LYDITSKFLD NKPIYRCGHC 
GFGGKHLHWH CPSCKQWGRM KPIHGLEGD