Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | lpp0542 |
Symbol | rpoN |
ID | 3119656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Legionella pneumophila str. Paris |
Kingdom | Bacteria |
Replicon accession | NC_006368 |
Strand | - |
Start bp | 588785 |
End bp | 590179 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637579238 |
Product | RNA polymerase factor sigma-54 |
Protein accession | YP_122880 |
Protein GI | 54296511 |
COG category | [K] Transcription |
COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACCGA CATTGCAGAT TGGTATTGGT CAACATCTCA CGTTAACCCC ACAACTGCAA CAAGCCATAA GACTGCTGCA ATTATCCACC TTTGATTTAC AACAAGAAAT TCAACTCGTT GTTGAATCAA ATCCTTTGCT TGAAGCCACT CCTGTTGAAG AAAAAGAAGA CGCCCAAATA AATACCAATC AGAACCAAGA TGAATATTCA GATTTTCAAT GGTCACAACT GTATAATAAC TTAAACAAGC GCAATAATTT TGAAGAAAAT GATTACAATT TTGATAATTT ACACTGCACT ACCACCAATT TACAAGATCA TCTTAACTGG CAACTTGACC TGACGCCTAT GAGCGATATT GACCGAGTCA TTGCTACAAC AATTATTGAT GCGATAAACG ATGACGGCTT TTTAACTATA CCCGTTTCTG AAATTCACGC CAGCTTAAAT AGCGATGATT TTCCTCTGGA TATAGAAGAA ATAGAAGCAG TGAGACACAG GCTTCAATTA TTTGACCCCG TAGGATGCGC ATCTGTTAAT TTAGCAGAAA CACTCGTTTT GCAATTGGAG CAACTTCCAC TGGAACCCAA GCTTCTGGCT ACTGCCAAGA AAGTCATTCT TGAAGACATT GAGTTGCTAG GGCAACATAA CTACAGACAA CTCATGAAAA ATCATCAAAT AAGTGAAAAA ACAATTCATG AAATATTACA AGTCATTCAT AAATTAAATC CAAAACCAGG AAGTTTGATC CATCAAGATA ATATTGAATA TGTTATTCCC GACTTAACTG TTAAAAAGAT AGATAATCAA TGGAAAGTTT TTTTGAATCA AGATATTCTT CCCAGGCTGA GTATCAATAG CCAATATGCC GCTTTAATCC AACGCGCAAA CAATAGTCTG GATAATCAAT TCTTAAAGCA TAATTTACAA GAAGCACGTT GGTTTTTAAA AAGCATTCAA AGCCGTCAGG AAACACTTCT AAAAGTAGCA ACCTGTATCA TGGAATACCA ACATGGATTT CTGGAATTTG GTGAAGAAGC GATGAAACCA TTAATATTGA ATGATGTAGC TTCTGCCTTG GATATGCATG AATCAACGGT ATCAAGAGTG ACAACTCAAA AATTTATTAA CACTCCTCGA GGTGTTTTTG AGTTAAAGTA CTTCTTCTCC AGCCATGTGA ATACTGATAG CGGAGGAGAA TGCTCTTCCA CCGCAATCCG AGCGGTAATA AAAAAATTAA TTTCAACAGA GAATAGAAAA AAACCTTTGA GTGATAGTAA AATTGCCCAA CTAATAGGTG AGCAAGGCAT TAAAGTAGCA AGACGTACTG TTGCCAAATA TCGCGAAGCA ATGGGGATTC CCCCATCCAA TGAAAGAAAG GTTATTAGTA GTTAA
|
Protein sequence | MKPTLQIGIG QHLTLTPQLQ QAIRLLQLST FDLQQEIQLV VESNPLLEAT PVEEKEDAQI NTNQNQDEYS DFQWSQLYNN LNKRNNFEEN DYNFDNLHCT TTNLQDHLNW QLDLTPMSDI DRVIATTIID AINDDGFLTI PVSEIHASLN SDDFPLDIEE IEAVRHRLQL FDPVGCASVN LAETLVLQLE QLPLEPKLLA TAKKVILEDI ELLGQHNYRQ LMKNHQISEK TIHEILQVIH KLNPKPGSLI HQDNIEYVIP DLTVKKIDNQ WKVFLNQDIL PRLSINSQYA ALIQRANNSL DNQFLKHNLQ EARWFLKSIQ SRQETLLKVA TCIMEYQHGF LEFGEEAMKP LILNDVASAL DMHESTVSRV TTQKFINTPR GVFELKYFFS SHVNTDSGGE CSSTAIRAVI KKLISTENRK KPLSDSKIAQ LIGEQGIKVA RRTVAKYREA MGIPPSNERK VISS
|
| |