Gene lpp0465 details

Gene Information

• Locus tag: lpp0465
• Symbol: rimM
• ID: 3117513
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Paris
• Kingdom: Bacteria
• Replicon accession: NC_006368
• Strand: -
• Start bp: 510795
• End bp: 511304
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637579161
• Product: hypothetical protein
• Protein accession: YP_122803
• Protein GI: 54296434
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAATAACA AGACAAATTG GGTTATCATC GGCCGTTTTG GCCGACCCCA TGGTATTAAA 
GGCTTTGTCA CGGTACATTC CTTCACAGAC CCTGCTGATA ATATCTTGCG GTACAATGAC 
TGGCACGTTT TTTTAAATAA ACAGTGGCAG CCCCTTAAGT TATTGACAAT AGAAGTAAGA 
AGTAAAGCGA TTATTGCTCA AATTGAAGGG TACCCAGAGC GTGAATTAGT CTCTGCATTA 
ACCAATTTAG ATATTGGTGT GCAAGAATCA CAGCTTGCAG CATTGGCACC AGGTGAGTAT 
TACTGGTATC AACTGATTGG CATGAGTGTC ATAAACTCCA AAGGCGATCT TTTTGGAAAA 
GTTGTTGAAA TCATGCCTAC TGGCTCGAAT GATGTACTTG TTGTGGAAGG TGAAAAAAGA 
CATTTAATTC CCTATCTTCC AGGACAATTT GTAATCAATA TTGATGAAAG CCAGCAAGTA 
ATCACTGTTG ATTGGGATAT GAATTTTTAG 

 

Protein sequence

MNNKTNWVII GRFGRPHGIK GFVTVHSFTD PADNILRYND WHVFLNKQWQ PLKLLTIEVR 
SKAIIAQIEG YPERELVSAL TNLDIGVQES QLAALAPGEY YWYQLIGMSV INSKGDLFGK 
VVEIMPTGSN DVLVVEGEKR HLIPYLPGQF VINIDESQQV ITVDWDMNF