| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | lpp0414 |
|---|
| Symbol | secY |
|---|
| ID | 3116484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Legionella pneumophila str. Paris |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006368 |
|---|
| Strand | + |
|---|
| Start bp | 465015 |
|---|
| End bp | 466367 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637579112 |
|---|
| Product | preprotein translocase subunit SecY |
|---|
| Protein accession | YP_122754 |
|---|
| Protein GI | 54296385 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0201] Preprotein translocase subunit SecY |
|---|
| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | AGGCGGTAGT ATAGAAGAGT GACTATGAAA AACCAAAAGC ATAACGGTAG TAAGCCTCGT
GGTGGATTAG CCGAACTAAA GTCAAGACTG TTGTTTGTTG TTCTCGGCAT ATTAGTTTAC
CGATTAGGTG CTCATATACC TGTTCCAGGA TTAGATCCTG CAAAATTAGC TAATTTTTTT
AGTGAACAGC AAAACACAAT ATTTGGCTTG TTTAATATGT TTTCTGGTGG AGCACTGTCT
CGTGTAACAG TGTTTGCGAT TGGTATTATG CCTTATATTT CTGCATCAAT TATTATTCAA
CTGTTTTCTG TAGTTTCTCC CAAGCTGGAA CAACTAAAGA AAGAGGGAGA ATCAGGGCGT
AGAAAAATAA ATCAATATAC CAGATATTTA ACATTGCTCT TGTCAATATT TCAGTCCATG
GGTATGGCGA GATGGTTGGC TAGTCAGCAA ATTGCTATGC AACCAGATTT CTCATTCTAC
TTTACTGCCG TTGTAACTTT AGTTACAGGC ACTATGTTTT TAATGTGGTT GGGTGAGCAA
ATTACCGAGA AAGGTGTTGG TAATGGAATT TCCTTAATTA TCTTTTCTGG AATTGTCTCT
AGCATGCCAA ATGCTATAGG ATCTGTCCTC CAGCAAGTTA AGGAAGGTCA GATGCAAGCC
CTCACACTAG TTATTATTGC AGCAGTAGTA ATTGTAGTAA CTGGTTTTGT TGTATTTATG
GAGCGTGCTC AACGACGAAT TCGTGTTAAT TATGCACAGA GGACGCAAGG TAGAAAGGTA
TATGCAGCCC AAACGAGTCA TTTACCATTA AAAATAAATA TGTCAGGTGT GATTCCACCA
ATATTTGCAT CTAGCATTAT TTTATTGCCA GCAACTTTAG CTCAATTTTT TTCACAAACT
AAAGGGCTGG GATGGTTATC TGATGTTGGA ATGGCACTAT CACCAGGTCA ACCCTTATAT
TTGATAGTGT ATGCAGCAGC TATTTTGTTC TTTGCATTCT TTTATGCTGC CTTAGTGTTT
AACCCTAAGG ATACAGCAGA TAACCTGAAA AAATCAGGAG CATATATTCC TGGAATTCGT
CCAGGAGAAC AAACAACCAA GTATATCGAT TCAGTGATGA CTCGTTTGAC TTTAGTTGGA
GCCATTTACT TGGTTCTAGT ATGTTTGTTA CCACAAATTC TAATGTATAC CTGGCATGTT
CCATTTTATT TTGGTGGTAC TTCGTTGCTG ATTATAGTTG TTGTTATTAT GGATTTTGTA
GCACAGGTAC AAGCTCATTT AATGACTCAG CAATATGATT CTTTATTAAA AAAGGCGAAT
TTTAGAGGTA CTAAGTTACC TGGTCTGCTA TGA
|
|---|
| Protein sequence | MTMKNQKHNG SKPRGGLAEL KSRLLFVVLG ILVYRLGAHI PVPGLDPAKL ANFFSEQQNT
IFGLFNMFSG GALSRVTVFA IGIMPYISAS IIIQLFSVVS PKLEQLKKEG ESGRRKINQY
TRYLTLLLSI FQSMGMARWL ASQQIAMQPD FSFYFTAVVT LVTGTMFLMW LGEQITEKGV
GNGISLIIFS GIVSSMPNAI GSVLQQVKEG QMQALTLVII AAVVIVVTGF VVFMERAQRR
IRVNYAQRTQ GRKVYAAQTS HLPLKINMSG VIPPIFASSI ILLPATLAQF FSQTKGLGWL
SDVGMALSPG QPLYLIVYAA AILFFAFFYA ALVFNPKDTA DNLKKSGAYI PGIRPGEQTT
KYIDSVMTRL TLVGAIYLVL VCLLPQILMY TWHVPFYFGG TSLLIIVVVI MDFVAQVQAH
LMTQQYDSLL KKANFRGTKL PGLL
|
|---|
| |