Gene lpp0180 details

Gene Information

• Locus tag: lpp0180
• Symbol: lvhD4
• ID: 3119484
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Paris
• Kingdom: Bacteria
• Replicon accession: NC_006368
• Strand: +
• Start bp: 204359
• End bp: 206278
• Gene Length: 1920 bp
• Protein Length: 633 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637578875
• Product: hypothetical protein
• Protein accession: YP_122526
• Protein GI: 54296157
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3505] Type IV secretory pathway, VirD4 components

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TGGAGGTGTA TTATAAACAT GCGTAATCCA TGGGTTGTTG CCATTACCTT GATAGGTGGG 
CTTGCTATAA ACGGCCAAAT GGCCGTGCTG TTAACCGGTA TCGCTCAATG GGCAAGTCCG 
TTGGTATTGG TTGATTTACT AACACACGGA TTTTATTGGG AAACTGCTAT CGCTGGATGT 
ATCACCGCTC TTTTGATGGG TTGTGCGGTT GGCTTTTTAA AGCAGGGATT TTATCGATAC 
CTTTCGTTTC TAATCAGCAG CATTCTGCTG GGTGGAATGG TTGTGTTTCT ACTGGGATTT 
GAGCTTTATA GCTGGATTTT TTTAAGTTCT GTACAAAGCC TCTCAGGACT CATGGAGCTT 
GCCTTCCTTC GTTATCAAGA ACCTGAGCTG TGGCATCTTT TCCTGACGGT CGAGGGGATT 
GTGTTTATCC TGACGTTTTT GGCTATTGCG CTTTATCTGT TTCATTGGCT TAAGCCCAAC 
AATAAGGCAC TCGGTAACGC GCATTTTTCA AATGGTTTTG AAACTAAAAA GGCTGGATTT 
TTCGAGCGTC AGGATCAAAG CATCGTTATT GGTAAAAAAT ACGGTGCGCC ACTTTACTCC 
AACGGCTTTG AACATGTTTT GGTTTTTGCG CCCACGGGAA GCGGTAAAAC ACGAAGTATC 
GGCATACCCA ATCTTTTTAA TTACCCCTAT TCGGTGGTGT GTAATGATGT AAAGCTCACG 
CTGTTTAGGA CCACATCAGG CTACCGTGAG CGAGTATTAG GACATCGATG CTTTTGCTGG 
GCACCTGCCG ATGAGAACCG AATCACCCAC TGCTACAATC CATTGTCCTT AATTTCCGAG 
GACAAAATTC AACGCCTGAC CGATATTCAG CGCATAGCCC ATATTTTAAT GCCAGACAAT 
AAAAAATCCG ACCCCATTTG GCAGCAAGCC TCACGTAAGT TATTTAAAGT GGCTGTGTTG 
TACCTGCTGG ACACACCTGA AAGACCCACC ACGCTTGGCG AAATAAATCG CTTGGTCAAA 
CAGGCTGGAT TTGATGATTG GCTGGCTTCC GTCTTGGAAG AAACCAATCA TCTCGACCCA 
GAGTTTTATC GCAACGGATA CTCTTATCTG AATAATCATG AAAAAACGAG AAGCTCAATT 
CTTGAAACCT TTTCGGGATA TTTTGAGTTA TTCGATGATC CGACCATTGA CGCAGCCACA 
GCACGTTCTG ATTTTGATCT GCGCCAATTA AGACGAGAAA AAATAACGAT TTACATAGGC 
TTTACCGATG ATGACATGGA ACGGCTCTCA CCATTGCTAA CACTGTTTTG GCAGCAGCTT 
ATTTCTGTCA TGATTAAAAA CATCCCCGAC CCAGTGGATG AACCCTATCC TCTGTTATGC 
CTGATTGATG AGTTTTCATC ATTAGGCCGT ATTGAAAGGC TAAGGCGTTC GCTTAAATTA 
TTGCGCGAAT ACCGTGTGCG TTGTGTACTC ATCATGCAAT ACATAGCCCA AACCTATGAA 
CAATACACCC ATGATGAAGC CAAAGCCTTT ACCAACATTA AAACTAAAAT AGCATTTGCT 
ACCGAAGACA TCTTTGATGC GGAGTATGTC AGTAAATTGT TAGGTACACG CACCGTGAAA 
GTATCCGCAG GCTCCACCAG TACCCAAACC CAAGGTTATT CCGAGTCTAA AAGCTATAAC 
TATCAGGCCA TCCCTTTATT AAGACCGGAT GAAGTCATGC GTTTACCCGA AGATCAAACC 
CTGATTATGC GAACAGGCCA TGCGCCAGTA AAAGCAGCAC AAATGGTTTG GTATTTGGAT 
ACCACAATGA AGCATTTAGC CTGCGGCAGT ACCGAAGTAC CGCGCCAAAA TGTTACGCAT 
CATCCATTTG TCCATCAGGC ATCGGATAAA TCGCTGATGC CTGAAGCACT CGAACTATAA 

 

Protein sequence

MRNPWVVAIT LIGGLAINGQ MAVLLTGIAQ WASPLVLVDL LTHGFYWETA IAGCITALLM 
GCAVGFLKQG FYRYLSFLIS SILLGGMVVF LLGFELYSWI FLSSVQSLSG LMELAFLRYQ 
EPELWHLFLT VEGIVFILTF LAIALYLFHW LKPNNKALGN AHFSNGFETK KAGFFERQDQ 
SIVIGKKYGA PLYSNGFEHV LVFAPTGSGK TRSIGIPNLF NYPYSVVCND VKLTLFRTTS 
GYRERVLGHR CFCWAPADEN RITHCYNPLS LISEDKIQRL TDIQRIAHIL MPDNKKSDPI 
WQQASRKLFK VAVLYLLDTP ERPTTLGEIN RLVKQAGFDD WLASVLEETN HLDPEFYRNG 
YSYLNNHEKT RSSILETFSG YFELFDDPTI DAATARSDFD LRQLRREKIT IYIGFTDDDM 
ERLSPLLTLF WQQLISVMIK NIPDPVDEPY PLLCLIDEFS SLGRIERLRR SLKLLREYRV 
RCVLIMQYIA QTYEQYTHDE AKAFTNIKTK IAFATEDIFD AEYVSKLLGT RTVKVSAGST 
STQTQGYSES KSYNYQAIPL LRPDEVMRLP EDQTLIMRTG HAPVKAAQMV WYLDTTMKHL 
ACGSTEVPRQ NVTHHPFVHQ ASDKSLMPEA LEL